Gene
RNA
| Item | Value |
|---|---|
| gene id | G142585 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 11405673 ~ 11475004 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192339 | True | 630 | lncRNA | 0.40 | 2 | 11474355 | 11475004 |
| TU192340 | False | 332 | lncRNA | 0.48 | 2 | 11405673 | 11475004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120573144 | LOC104948199,LOC103360918 | coding | upstream | 228632 | 11171019 ~ 11177041 (+) |
| LOC120573182 | LOC103384160,LOC100707302,LOC104948196,LOC104918736 | coding | upstream | 257474 | 11142838 ~ 11148199 (+) |
| ppp2r5b | ppp2r5b | coding | upstream | 264976 | 11102102 ~ 11140697 (+) |
| batf2 | NA | coding | upstream | 313493 | 11082981 ~ 11092180 (+) |
| sb:cb1058 | NA | coding | upstream | 336830 | 11063690 ~ 11068843 (+) |
| slc3a2a | NA | coding | downstream | 13827 | 11488831 ~ 11495230 (+) |
| si:dkey-19b23.10 | NA | coding | downstream | 32927 | 11507931 ~ 11526255 (+) |
| LOC120573489 | LOC103363230,LOC103154086 | coding | downstream | 60674 | 11535678 ~ 11692602 (+) |
| LOC120573488 | NA | coding | downstream | 313238 | 11788242 ~ 11856354 (+) |
| LOC120572498 | NA | coding | downstream | 591880 | 12066884 ~ 12095393 (+) |
| G142579 | plcb3 | non-coding | upstream | 57694 | 11346782 ~ 11347979 (+) |
| G142577 | NA | non-coding | upstream | 66980 | 11338319 ~ 11338693 (+) |
| G142571 | NA | non-coding | upstream | 70327 | 11332368 ~ 11335346 (+) |
| LOC120573727 | NA | non-coding | upstream | 330316 | 11075284 ~ 11075357 (+) |
| LOC120573728 | NA | non-coding | upstream | 330522 | 11075079 ~ 11075151 (+) |
| G142637 | NA | non-coding | downstream | 438699 | 11913703 ~ 11918411 (+) |
| G142640 | NA | non-coding | downstream | 452801 | 11927805 ~ 11991249 (+) |
| G142639 | ddit4l,LOC102788552 | non-coding | downstream | 495325 | 11970329 ~ 11995221 (+) |
| G142815 | LOC101062179 | non-coding | downstream | 669972 | 12144976 ~ 12147256 (+) |
| G142822 | NA | non-coding | downstream | 724649 | 12199653 ~ 12199876 (+) |
| LOC120573186 | LOC108242886 | other | upstream | 97375 | 11204642 ~ 11308298 (+) |
| zgc:101765 | LOC104948199,LOC103360918 | other | upstream | 228632 | 11167406 ~ 11177041 (+) |
| LOC120573689 | NA | other | upstream | 700348 | 10698284 ~ 10705325 (+) |
| tmem88b | tmem88,LOC104964151,LOC103375639,LOC102237254 | other | upstream | 881925 | 10514237 ~ 10523748 (+) |
| LOC120572381 | NA | other | upstream | 2656773 | 8746620 ~ 8748900 (+) |
| LOC120573230 | col25a1,LOC102793499 | other | downstream | 949299 | 12424303 ~ 12577034 (+) |
| etnppl | etnppl,LOC104966525 | other | downstream | 1103951 | 12578955 ~ 12593799 (+) |
| ppargc1a | ppargc1a | other | downstream | 1282692 | 12757696 ~ 13035112 (+) |
| G143326 | NA | other | downstream | 3839746 | 15314750 ~ 15321516 (+) |
| LOC120573218 | ctdnep1,dulda,LOC106577558 | other | downstream | 4230817 | 15705821 ~ 15715848 (+) |
