G146700


Basic Information

Item Value
gene id G146700
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28062803 ~ 28063293 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU198069
cagtatacttgtggggtcccgacagctttgtggggccaaaatgctggaccccacaagtttaaagggctgtttgagggttaagacttggttttaggattagggatagaattaggttatggttagggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaacaTTAAGGttaggggctagggaatgcattatgtcaatgatatgtctccacaaa
>TU198070
cagtatacttgtggggtcccgacagctttgtggggccaaaatgctggaccccacaagtttaaagggctgtttgagggttaagacttggttttaggattagggatagaattaggttatggttagggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaacaTTAAGGttaggggctagggaatgcattatgtcaatgatatgtctccacaaa
>TU198071
cagtatacttgtggggtcccgacagctttgtggggccaaaatgctggaccccacaagtttaaagggctgtttgagggttaagacttggttttaggattagggatagaattaggttatggttagggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttagacatttagttgtgatggttaaggttagggtaagggttaaggttaggtatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaacaTTAAGGttaggggctagggaatgcattatgtcaatgatatgtctccacaaa

Function

GO:

id name namespace
GO:0070469 respirasome cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0022857 transmembrane transporter activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0022890 inorganic cation transmembrane transporter activity molecular_function
GO:0015002 heme-copper terminal oxidase activity molecular_function
GO:0015318 inorganic molecular entity transmembrane transporter activity molecular_function
GO:0015075 ion transmembrane transporter activity molecular_function
GO:0015077 monovalent inorganic cation transmembrane transporter activity molecular_function
GO:0015078 proton transmembrane transporter activity molecular_function
GO:0008324 cation transmembrane transporter activity molecular_function
GO:0004129 cytochrome-c oxidase activity molecular_function
GO:0016675 oxidoreductase activity, acting on a heme group of donors molecular_function
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU198069 False 401 lncRNA 0.42 2 28062803 28063293
TU198070 False 356 lncRNA 0.42 2 28062803 28063293
TU198071 True 446 lncRNA 0.41 2 28062803 28063293

Neighbor

gene id symbol gene type direction distance location
abce1 abce1 coding upstream 176394 27859806 ~ 27886409 (+)
LOC120572571 LOC108249162,LOC101468201,LOC107376820,LOC101171440,LOC102781423,LOC100704195 coding upstream 226546 27805878 ~ 27836257 (+)
LOC120572337 NA coding upstream 260062 27781476 ~ 27802741 (+)
LOC120573332 NA coding upstream 336382 27724307 ~ 27726421 (+)
LOC120572567 NA coding upstream 431596 27625769 ~ 27631207 (+)
LOC120572575 LOC108243880,LOC108243879,LOC108243890,LOC108243930,LOC108229645 coding downstream 112638 28175931 ~ 28182977 (+)
LOC120572283 LOC103147980,LOC103369207,LOC106934234,LOC108243879 coding downstream 135630 28198923 ~ 28214032 (+)
LOC120572284 LOC103373335 coding downstream 212105 28275398 ~ 28295982 (+)
LOC120572286 NA coding downstream 319662 28382955 ~ 28385310 (+)
txk txk,LOC108249159 coding downstream 346252 28409545 ~ 28446660 (+)
G146699 NA non-coding upstream 9535 28051970 ~ 28053268 (+)
G146676 NA non-coding upstream 35452 27997612 ~ 28027351 (+)
G146674 NA non-coding upstream 65315 27996891 ~ 27997488 (+)
G146689 NA non-coding upstream 68215 27994251 ~ 27994588 (+)
G146688 NA non-coding upstream 72514 27990082 ~ 27990289 (+)
G146703 NA non-coding downstream 12525 28075818 ~ 28082058 (+)
LOC120572289 NA non-coding downstream 151406 28214699 ~ 28215868 (+)
G146742 NA non-coding downstream 254955 28318248 ~ 28411802 (+)
G146756 NA non-coding downstream 366688 28429981 ~ 28453160 (+)
G146765 NA non-coding downstream 402150 28465443 ~ 28544749 (+)
G146666 NA other upstream 99590 27905615 ~ 27963213 (+)
G146660 NA other upstream 213949 27847090 ~ 27848854 (+)
LOC120572568 NA other upstream 358101 27691401 ~ 27704702 (+)
LOC120572201 NA other upstream 399281 27660424 ~ 27663522 (+)
LOC120572199 NA other upstream 442164 27615248 ~ 27620639 (+)
LOC120572281 NA other downstream 95045 28158338 ~ 28168347 (+)
LOC120572278 NA other downstream 127551 28190844 ~ 28223131 (+)
LOC120572279 LOC103147982,LOC108243879,LOC108243930,LOC108243880,LOC103369207,LOC108243890 other downstream 155519 28218812 ~ 28273858 (+)
G146739 NA other downstream 234481 28297774 ~ 28298276 (+)
G146744 LOC103480850,LOC103151628 other downstream 267863 28331156 ~ 28419112 (+)

Expression


Co-expression Network