G146744 (LOC103480850,LOC103151628)


Basic Information

Item Value
gene id G146744
gene name LOC103480850,LOC103151628
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28331156 ~ 28419112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU198126
acacacacacacacacacacacacacacacagacagacacacacacacacagacaaacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacc
>TU198127
tgGTTCCTGTCCCGTGCGTTGGCGTATCTGAACCTCTGGATGTAGTAGAAGACGAGCCAGGCCAGCGAGATGATCATCAGCACGATGAAGGAGATGGACACGAACACCACGGACGTCCGGCTCACGTACTTCTGCAGGTTGCGCGTGCCGATGGTGATCGTCATGGTGACCGTCACGTTGCGCTCCAGCAGCGACGCCACCTCGCGGCCCTTCGGCTCGGGGATCATGATGGCGACCACCTCGCCGGTACCTGccgagaaaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacagacagacatacgcagacagacacacacatacagacagacacacacacacacagacacacacacacacacacacacacacagacaaacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacagacacacacacacacacacacacacagagacacacacagacacacagacacacagacacacacagacacacagacacacacacacacacacagacacagagacacagagacacagagacacacagacacacacagagacacacacacacacacagacacagacacacacacacacagacacacacacacacacacagacacagac
>TU198128
tgGTTCCTGTCCCGTGCGTTGGCGTATCTGAACCTCTGGATGTAGTAGAAGACGAGCCAGGCCAGCGAGATGATCATCAGCACGATGAAGGAGATGGACACGAACACCACGGACGTCCGGCTCACGTACTTCTGCAGGTTGCGCGTGCCGATGGTGATCGTCATGGTGACCGTCACGTTGCGCTCCAGCAGCGACGCCACCTCGCGGCCCTTCGGCTCGGGGATCATGATGGCGACCACCTCGCCGGTACCTGccgagaaaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacagacagacatacgcagacagacacacacatacagacagacacacacacacacagacacacacacacacacacacacacacagacaaacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacatagacagacagacagacacacacacacacacacaccacacacacacacacacacagacagacacacacacacacagacacacacacagacagacagacacacacacacagacagacagacagacagacagagacacacacacacacacacacacaaacagacagacc
>TU198129
acacacacacacacagacagacagacagacagacagacagacacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacagacacacacacacacagacagacagacacagacagagacacacacacacacacacacacaaacagacagaccgagacacacacatagacagacagacagacacacacacacacacacaccacacacacacacacacacagacagacacacacacacacacacacacacacagagacacacacacagacagacagacagacagacagagacacacacacacacacacacacaaacagacagacc
>TU198130
acacacacacacacacacacacacacacacagacagacacacacacacacagacaaacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacatagacagacagacagacacacacacacacacacaccacacacacacacacacacagacagacacacacacacacacacacacacacagagacacacacacagacagacagacagacagacagagacacacacacacacacacacacaaacagacagacc
>TU198132
caaggttggaacaaaaaaataaaaatgtttatattggaacccatttttcagtttttccaaatgtccgtttgtgctgaGAACATTGAACTGCTAAGCTTTACACGGAGCGTTGATAGTTGCGGCGCTGGACTGGTGTAGGGCTGACGTGTTACCGTAGCAGCGATCCACAGGACCTCCACGTTCTTCCTCTTCTTGGTCTGGACGCTGCGATCCAGAGAGGACAGCAGGTCTGGTAGTGACTGGATACCAGCTGacggagacacagagacagagacacacagacagagacacacagagacacacagagacagacacagacacagagacacatagacacacagacacagagacacacagagacagagacacagagacacacagagacagagacacagagacacacagagacagagacacacagagacagagacacagagacacacagagacagagacacagagacacacagacagagacacagacagacagacacacagagacacagacacacagacacacagacacagagacacacagagacagagacacacagacagagacacagagacagagacacagacacacagagacacagagacacacagacagagacacacacagacacagagacacacagagacacacagacacagacacagagacacacacacacacagagacacacagacagagacacacacagagacagagacacacagagacagagacacacagagacacacagacagagacacacagacacacagagacagagacacacagagacagagacacacagagacacacagacagagacacacacagacacagagacacacagagacagagacacacagagacacacagacagagacacacagacagagacacacacacacacatagacacagagacacacacacagagacacacagacacacacatagacacacacagacacagaacacagagacacacacagagacacacacagacacacagacacacagacacacacagacacacagacacacacacacacacacagacacagagacacagagacacagagacacacagacacacacagagacacacacagacacacacacagacacacagacacacacacacacacacagacacagagacacagagacacagagacacacagacacacacagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198126 False 241 lncRNA 0.50 2 28331755 28332537
TU198127 False 711 TUCP 0.53 4 28331156 28372421
TU198128 False 679 TUCP 0.53 4 28331156 28419112
TU198129 False 346 lncRNA 0.50 3 28418527 28419112
TU198130 False 296 lncRNA 0.49 4 28331755 28419112
TU198132 True 1187 lncRNA 0.49 3 28370378 28372113

Neighbor

gene id symbol gene type direction distance location
LOC120572284 LOC103373335 coding upstream 35174 28275398 ~ 28295982 (+)
LOC120572283 LOC103147980,LOC103369207,LOC106934234,LOC108243879 coding upstream 117124 28198923 ~ 28214032 (+)
LOC120572575 LOC108243880,LOC108243879,LOC108243890,LOC108243930,LOC108229645 coding upstream 148179 28175931 ~ 28182977 (+)
abce1 abce1 coding upstream 444747 27859806 ~ 27886409 (+)
LOC120572571 LOC108249162,LOC101468201,LOC107376820,LOC101171440,LOC102781423,LOC100704195 coding upstream 494899 27805878 ~ 27836257 (+)
LOC120572276 cdkl2,LOC103363889,LOC102296890,LOC105921304 coding downstream 32881 28451993 ~ 28467121 (+)
LOC120572291 NA coding downstream 193664 28612776 ~ 28613543 (+)
LOC120572212 NA coding downstream 243508 28662620 ~ 28670821 (+)
LOC120572584 NA coding downstream 263909 28683021 ~ 28704147 (+)
LOC120572585 NA coding downstream 287511 28706623 ~ 28711060 (+)
LOC120572289 NA non-coding upstream 115288 28214699 ~ 28215868 (+)
G146703 NA non-coding upstream 249098 28075818 ~ 28082058 (+)
G146700 NA non-coding upstream 267863 28062803 ~ 28063293 (+)
G146699 NA non-coding upstream 277888 28051970 ~ 28053268 (+)
G146676 NA non-coding upstream 303805 27997612 ~ 28027351 (+)
G146756 NA non-coding downstream 10869 28429981 ~ 28453160 (+)
G146765 NA non-coding downstream 46331 28465443 ~ 28544749 (+)
G146778 NA non-coding downstream 101815 28520927 ~ 28529168 (+)
G146779 NA non-coding downstream 107173 28526285 ~ 28526703 (+)
LOC120572290 NA non-coding downstream 120233 28539345 ~ 28548694 (+)
G146739 NA other upstream 32880 28297774 ~ 28298276 (+)
LOC120572279 LOC103147982,LOC108243879,LOC108243930,LOC108243880,LOC103369207,LOC108243890 other upstream 57298 28218812 ~ 28273858 (+)
LOC120572278 NA other upstream 108025 28190844 ~ 28223131 (+)
LOC120572281 NA other upstream 162809 28158338 ~ 28168347 (+)
G146671 NA other upstream 217074 28060562 ~ 28114082 (+)
G146753 NA other downstream 136440 28555552 ~ 28585067 (+)
tec tec other downstream 198753 28617865 ~ 28651546 (+)
G147035 NA other downstream 610370 29029482 ~ 29065509 (+)
G147192 NA other downstream 850302 29269414 ~ 29480487 (+)
LOC120572956 NA other downstream 995151 29414263 ~ 29421799 (+)

Expression


Co-expression Network