RNA id: TU198130


Basic Information

Item Value
RNA id TU198130
length 296
lncRNA type read_through
GC content 0.49
exon number 4
gene id G146744
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28331156 ~ 28419112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacacagacagacacacacacacacagacaaacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacatagacagacagacagacacacacacacacacacaccacacacacacacacacacagacagacacacacacacacacacacacacacagagacacacacacagacagacagacagacagacagagacacacacacacacacacacacaaacagacagacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU198123 lncRNA upstream 12959 28318248 ~ 28318796 (+) False G146742
TU198082 lncRNA upstream 57897 28261788 ~ 28273858 (+) False LOC120572279
TU198093 lncRNA upstream 108624 28192509 ~ 28223131 (+) False LOC120572278
XR_005641414.1 lncRNA upstream 115887 28214699 ~ 28215868 (+) True LOC120572289
TU198086 lncRNA upstream 163408 28158547 ~ 28168347 (+) False LOC120572281
TU198159 lncRNA downstream 10869 28429981 ~ 28453160 (+) True G146756
TU198175 lncRNA downstream 46331 28465443 ~ 28544749 (+) True G146765
TU198193 lncRNA downstream 101815 28520927 ~ 28529168 (+) True G146778
TU198194 lncRNA downstream 107173 28526285 ~ 28526703 (+) True G146779
TU198201 lncRNA downstream 120233 28539345 ~ 28548694 (+) True LOC120572290
XM_039821532.1 mRNA upstream 35773 28275398 ~ 28295982 (+) False LOC120572284
XM_039821530.1 mRNA upstream 35773 28275398 ~ 28295982 (+) True LOC120572284
XM_039821533.1 mRNA upstream 35773 28275398 ~ 28295982 (+) False LOC120572284
XM_039821531.1 mRNA upstream 35773 28275399 ~ 28295982 (+) False LOC120572284
XM_039821522.1 mRNA upstream 58101 28261786 ~ 28273654 (+) False LOC120572279
XM_039821513.1 mRNA downstream 32881 28451993 ~ 28467121 (+) True LOC120572276
XM_039821514.1 mRNA downstream 35914 28455026 ~ 28467121 (+) False LOC120572276
XM_039821538.1 mRNA downstream 193664 28612776 ~ 28613543 (+) True LOC120572291
XM_039821904.1 mRNA downstream 198753 28617865 ~ 28651546 (+) True tec
XM_039821412.1 mRNA downstream 243508 28662620 ~ 28670821 (+) True LOC120572212
TU198120 other upstream 33479 28297774 ~ 28298276 (+) True G146739
TU198107 other upstream 74242 28218812 ~ 28257513 (+) False LOC120572279
TU198108 other upstream 74242 28250920 ~ 28257513 (+) False LOC120572279
TU198058 other upstream 240305 28073025 ~ 28091450 (+) True G146694
TU198152 other downstream 136440 28555552 ~ 28585067 (+) True G146753
TU198155 other downstream 136440 28555552 ~ 28585067 (+) False G146753
TU198209 other downstream 198812 28617924 ~ 28631108 (+) False tec
TU198224 other downstream 219638 28638750 ~ 28651513 (+) False tec
TU198223 other downstream 219968 28639080 ~ 28651513 (+) False tec

Expression Profile