RNA id: TU198194


Basic Information

Item Value
RNA id TU198194
length 329
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G146779
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28526285 ~ 28526703 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agggactacacacacacacacacaagtctgtattactatctttgtggggacatatcattgacataatgcattccctagccccttaccctaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccttaaccatcacaactaaatgcctaaccttaacccttaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccttaaccatcacaactaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU198159 lncRNA upstream 73125 28429981 ~ 28453160 (+) True G146756
TU198130 lncRNA upstream 107173 28331755 ~ 28419112 (+) False G146744
TU198201 lncRNA downstream 12642 28539345 ~ 28548694 (+) True LOC120572290
XR_005641415.1 lncRNA downstream 14404 28541107 ~ 28548109 (+) False LOC120572290
TU198204 lncRNA downstream 17537 28544240 ~ 28544949 (+) True G146783
TU198158 lncRNA downstream 25096 28551799 ~ 28574443 (+) True G146755
TU198513 lncRNA downstream 197507 28724210 ~ 28778995 (+) False G146986
XM_039821513.1 mRNA upstream 59164 28451993 ~ 28467121 (+) True LOC120572276
XM_039821514.1 mRNA upstream 59164 28455026 ~ 28467121 (+) False LOC120572276
XM_039821902.1 mRNA upstream 79625 28409545 ~ 28446660 (+) True txk
XM_039821535.1 mRNA upstream 140975 28382955 ~ 28385310 (+) True LOC120572286
XM_039821531.1 mRNA upstream 230303 28275399 ~ 28295982 (+) False LOC120572284
XM_039821538.1 mRNA downstream 86073 28612776 ~ 28613543 (+) True LOC120572291
XM_039821904.1 mRNA downstream 91162 28617865 ~ 28651546 (+) True tec
XM_039821412.1 mRNA downstream 135917 28662620 ~ 28670821 (+) True LOC120572212
XM_039821906.1 mRNA downstream 156318 28683021 ~ 28704147 (+) True LOC120572584
XM_039821907.1 mRNA downstream 179920 28706623 ~ 28711060 (+) True LOC120572585
TU198128 other upstream 107173 28331156 ~ 28419112 (+) False G146744
TU198160 other upstream 124935 28399266 ~ 28401350 (+) True G146757
TU198127 other upstream 153864 28331156 ~ 28372421 (+) False G146744
TU198139 other upstream 172617 28350866 ~ 28353668 (+) True G146747
TU198142 other upstream 172617 28350866 ~ 28353668 (+) False G146747
TU198152 other downstream 28849 28555552 ~ 28585067 (+) True G146753
TU198155 other downstream 28849 28555552 ~ 28585067 (+) False G146753
TU198209 other downstream 91221 28617924 ~ 28631108 (+) False tec
TU198224 other downstream 112047 28638750 ~ 28651513 (+) False tec
TU198223 other downstream 112377 28639080 ~ 28651513 (+) False tec

Expression Profile