RNA id: TU198175


Basic Information

Item Value
RNA id TU198175
length 267
lncRNA type sense_over
GC content 0.39
exon number 4
gene id G146765
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28465443 ~ 28544749 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acgcacacacacacacacacacacacacacacacacagacacacagtcacacacacacacaaacacacacacacacacacacaaatacacacagacaaacaccacatacacatatacacacacacacacacacatacataaacacataaacacacacacatacacacacacatatacataaacacatacacacacacatatacataaacacataaacacacacacacacacacagacacacatatacataaacacataaacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU198159 lncRNA upstream 12283 28429981 ~ 28453160 (+) True G146756
TU198130 lncRNA upstream 46331 28331755 ~ 28419112 (+) False G146744
TU198129 lncRNA upstream 46331 28418527 ~ 28419112 (+) False G146744
TU198132 lncRNA upstream 93330 28370378 ~ 28372113 (+) True G146744
TU198144 lncRNA upstream 111775 28350866 ~ 28353668 (+) False G146747
TU198158 lncRNA downstream 7050 28551799 ~ 28574443 (+) True G146755
TU198513 lncRNA downstream 179461 28724210 ~ 28778995 (+) False G146986
TU198512 lncRNA downstream 190604 28735353 ~ 28778995 (+) True G146986
TU198519 lncRNA downstream 214892 28759641 ~ 28763053 (+) True G146989
TU198510 lncRNA downstream 230210 28774959 ~ 28778995 (+) False G146986
XM_039821902.1 mRNA upstream 18783 28409545 ~ 28446660 (+) True txk
XM_039821535.1 mRNA upstream 80133 28382955 ~ 28385310 (+) True LOC120572286
XM_039821532.1 mRNA upstream 169461 28275398 ~ 28295982 (+) False LOC120572284
XM_039821538.1 mRNA downstream 68027 28612776 ~ 28613543 (+) True LOC120572291
XM_039821904.1 mRNA downstream 73116 28617865 ~ 28651546 (+) True tec
XM_039821412.1 mRNA downstream 117871 28662620 ~ 28670821 (+) True LOC120572212
XM_039821906.1 mRNA downstream 138272 28683021 ~ 28704147 (+) True LOC120572584
XM_039821907.1 mRNA downstream 161874 28706623 ~ 28711060 (+) True LOC120572585
TU198128 other upstream 46331 28331156 ~ 28419112 (+) False G146744
TU198160 other upstream 64093 28399266 ~ 28401350 (+) True G146757
TU198127 other upstream 93022 28331156 ~ 28372421 (+) False G146744
TU198139 other upstream 111775 28350866 ~ 28353668 (+) True G146747
TU198142 other upstream 111775 28350866 ~ 28353668 (+) False G146747
TU198152 other downstream 10803 28555552 ~ 28585067 (+) True G146753
TU198155 other downstream 10803 28555552 ~ 28585067 (+) False G146753
TU198209 other downstream 73175 28617924 ~ 28631108 (+) False tec
TU198224 other downstream 94001 28638750 ~ 28651513 (+) False tec
TU198223 other downstream 94331 28639080 ~ 28651513 (+) False tec

Expression Profile