G147387


Basic Information

Item Value
gene id G147387
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 29912293 ~ 29917860 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU199094
CAGCTATCTCTGTAATCCTGAATATTTTACATTATAAGAATTAAGCTTTTTTTCTCCGTAGTTTTTCATGAAATTGATCTGCGTTACTTTCTGTCTTTTACAGGGTTTGTATTTCAGTTCTCAGTTCAGTCAGTGTCTTTAACATCAGCTCCCTATCACTGCTGAGAGTGGGAATGAGACGCTCATTGTAAAAATGTCTTTGGATGAAAGCATCAGATCAGTTgagtcagacagccagcaggtggcagcacagctccttctctttctttacacaTGCTCAGTTCAGCTCACAGTTCACT

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:1901565 organonitrogen compound catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process

KEGG:

id description
ko04612 Antigen processing and presentation
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU199094 True 299 lncRNA 0.40 2 29912293 29917860

Neighbor

gene id symbol gene type direction distance location
LOC120572934 NA coding upstream 28898 29878869 ~ 29883395 (+)
LOC120572888 NA coding upstream 86861 29823219 ~ 29825432 (+)
LOC120572760 NA coding upstream 173105 29717852 ~ 29739188 (+)
LOC120572920 NA coding upstream 392034 29516852 ~ 29520259 (+)
LOC120572872 NA coding upstream 504028 29385915 ~ 29408265 (+)
LOC120572819 NA coding downstream 21334 29939194 ~ 29953407 (+)
LOC120572923 NA coding downstream 33289 29951149 ~ 29952925 (+)
LOC120572769 LOC101480196,LOC103389327 coding downstream 212472 30130332 ~ 30154540 (+)
LOC120572780 NA coding downstream 240120 30157980 ~ 30172665 (+)
LOC120572877 NA coding downstream 369429 30287289 ~ 30291890 (+)
LOC120572980 NA non-coding upstream 985 29908841 ~ 29911308 (+)
G147365 NA non-coding upstream 25731 29840492 ~ 29886562 (+)
G147349 NA non-coding upstream 33713 29872424 ~ 29878580 (+)
G147350 NA non-coding upstream 34279 29876238 ~ 29878014 (+)
G147381 NA non-coding upstream 49356 29853325 ~ 29862937 (+)
LOC120573035 NA non-coding downstream 20208 29938068 ~ 29938474 (+)
LOC120573008 NA non-coding downstream 41095 29958955 ~ 29965038 (+)
G147396 NA non-coding downstream 73240 29991100 ~ 29994994 (+)
G147394 NA non-coding downstream 111183 30029043 ~ 30029837 (+)
G147399 NA non-coding downstream 123972 30041832 ~ 30042349 (+)
G147348 eif5b other upstream 51401 29745355 ~ 29860892 (+)
G147352 NA other upstream 115161 29750089 ~ 29797132 (+)
LOC120572592 tmub1,LOC105023792 other upstream 216041 29691329 ~ 29696252 (+)
clrn1 clrn1,LOC102780584 other upstream 221448 29675313 ~ 29690845 (+)
G147303 NA other upstream 294141 29573427 ~ 29618152 (+)
LOC120572948 NA other downstream 4895 29922755 ~ 30002481 (+)
fer fer,LOC102300771,LOC102783831 other downstream 84516 30002376 ~ 30027881 (+)
prpf4 prpf4,LOC102784297 other downstream 117713 30035573 ~ 30053705 (+)
atp6v1g1 atp6v1g1,LOC103369321,LOC101172700,LOC106512071 other downstream 138725 30056585 ~ 30059161 (+)
LOC120572774 NA other downstream 272333 30190193 ~ 30214405 (+)

Expression


Co-expression Network