G147699 (LOC106456568)


Basic Information

Item Value
gene id G147699
gene name LOC106456568
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30183261 ~ 30676997 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU199640
TCATTTCACCAACTGTTAGGATGGAGGACACATCTGTACTGCAGCTACTCTttctgacCTCACTGCTGAGCAGCACAACAAACCAAGtctctctgactgtgagacccagcagctctcagatgtttgaaggacagcctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggGACACAACCAGAGAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAACTACGTGGACCCAGAGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaacatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaagacGTCCTCCAACctcccagctggtttctataaagatggctccttcatcaggactgagcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgca
>TU199644
tctctctgagctgtgaggaggacgactgctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAATGTGGACCTGACTGGGGGACAACTGCTGGTTCTTCCTGTAACATCAGCTACATAGACCCACTGGAGAGTGGAGTttactggtgtgagtccagagagggggcaaccagtaacagcatcaacatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaagatgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgggcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagGGAAACCAAAGACCACAAGCCCTCCTACGACCACAAGCTCCCCTACAACCACAAGCCCTCCTACGACCACAAGCCCTCCTACGACCACAAGCTCCCCTACAACCACAAGCCCTCCT
>TU199650
CAGtcacagaggaaggaggagggctTACTTGATGCGACTATGAAATGAACGTGTAGACATTTCACCACTGTTAGGATGGAGGACACATCTCTACTGTGGCTACTCTttctgacCTCACTGCTGAGCAGCACAACAAACCAAGcctctctgactgtgagtcccagcagatctcagatgtttgaaggacagtctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacGACCGGAGACACCGGGACCAGGAAGTGTGATGACTGGGGAGGAAAATCTGCTGGTTCTTCCTGTATCATCGATTACATAGACCCAGGGGACAGTGGACTTTACTGGTGTGAGTCCACAGAGGGAGCAACCAGTAACAGCATCAGcatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaagacgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgagcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgtcacatcagcagtgttggagagtctccacccagctgggtctctgtcacagAGAAACCTATGACCACAAGCCCTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199640 False 546 TUCP 0.52 5 30299732 30326820
TU199644 False 572 TUCP 0.54 5 30675187 30676997
TU199650 True 678 TUCP 0.52 5 30183261 30284720

Neighbor

gene id symbol gene type direction distance location
LOC120572852 NA coding downstream 6136 30173818 ~ 30177125 (-)
LOC120572594 nfxl1 coding downstream 378360 29794709 ~ 29804901 (-)
LOC120572768 eif5b coding downstream 424705 29745355 ~ 29758556 (-)
LOC120572590 NA coding downstream 508307 29660300 ~ 29674954 (-)
LOC120572743 baz1a,LOC106510828 coding downstream 528447 29645396 ~ 29654814 (-)
LOC120572931 NA coding upstream 289812 30966809 ~ 30969290 (-)
LOC120572930 NA coding upstream 432434 31109431 ~ 31126250 (-)
LOC120572825 NA coding upstream 543591 31220588 ~ 31222767 (-)
LOC120572887 NA coding upstream 568796 31245793 ~ 31254239 (-)
LOC120572747 NA coding upstream 758818 31435815 ~ 31623813 (-)
G147698 NA non-coding downstream 10617 30171413 ~ 30172644 (-)
G147658 NA non-coding downstream 51274 30100012 ~ 30131987 (-)
G147645 NA non-coding downstream 53607 29964680 ~ 30129654 (-)
G147659 NA non-coding downstream 70192 30102854 ~ 30113069 (-)
G147657 NA non-coding downstream 83421 30097775 ~ 30099840 (-)
G147762 NA non-coding upstream 25598 30702595 ~ 30708393 (-)
G147767 NA non-coding upstream 62645 30739642 ~ 30746752 (-)
LOC120573057 NA non-coding upstream 78146 30755143 ~ 30757393 (-)
G147774 NA non-coding upstream 110883 30787880 ~ 30795476 (-)
LOC120573027 NA non-coding upstream 144911 30821908 ~ 30827021 (-)
LOC120572750 LOC106608414,LOC107673152,LOC108275467,LOC107574437,LOC107750191 other downstream 60385 30105360 ~ 30122876 (-)
LOC120572598 nfxl1 other downstream 96037 30068430 ~ 30087224 (-)
G147653 atp6v1g1,LOC103369321,LOC101172700,LOC106512071 other downstream 124058 30056592 ~ 30059203 (-)
G147634 prpf4 other downstream 141676 30036418 ~ 30041585 (-)
cdc26 cdc26 other downstream 147372 29981706 ~ 30035889 (-)
LOC120572909 NA other upstream 123812 30800809 ~ 30867390 (-)
LOC120572603 NA other upstream 152616 30829613 ~ 30831330 (-)
LOC120572919 NA other upstream 369649 31046646 ~ 31056385 (-)
LOC120572802 NA other upstream 600980 31277977 ~ 31673624 (-)
G148246 NA other upstream 751931 31428928 ~ 31737682 (-)

Expression


Co-expression Network