RNA id: TU199644


Basic Information

Item Value
RNA id TU199644
length 572
RNA type TUCP
GC content 0.54
exon number 5
gene id G147699
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30183261 ~ 30676997 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctctctgagctgtgaggaggacgactgctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAATGTGGACCTGACTGGGGGACAACTGCTGGTTCTTCCTGTAACATCAGCTACATAGACCCACTGGAGAGTGGAGTttactggtgtgagtccagagagggggcaaccagtaacagcatcaacatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaagatgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgggcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagGGAAACCAAAGACCACAAGCCCTCCTACGACCACAAGCTCCCCTACAACCACAAGCCCTCCTACGACCACAAGCCCTCCTACGACCACAAGCTCCCCTACAACCACAAGCCCTCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641574.1 lncRNA downstream 78428 30594912 ~ 30596759 (-) True LOC120572999
XR_005641545.1 lncRNA downstream 160136 30513652 ~ 30515051 (-) True LOC120572974
TU199694 lncRNA downstream 188154 30484276 ~ 30487033 (-) False G147733
TU199695 lncRNA downstream 188154 30484276 ~ 30487033 (-) False G147733
TU199696 lncRNA downstream 188154 30484276 ~ 30487033 (-) True G147733
TU199736 lncRNA upstream 25598 30702595 ~ 30708393 (-) True G147762
TU199743 lncRNA upstream 62645 30739642 ~ 30746752 (-) True G147767
XR_005641629.1 lncRNA upstream 78146 30755143 ~ 30757393 (-) True LOC120573057
TU199751 lncRNA upstream 110883 30787880 ~ 30795476 (-) True G147774
TU199754 lncRNA upstream 123812 30800809 ~ 30862016 (-) False LOC120572909
XM_039822391.1 mRNA downstream 8597 30652562 ~ 30666590 (-) True LOC120572880
XM_039822323.1 mRNA downstream 62741 30606528 ~ 30612446 (-) False LOC120572838
XM_039822320.1 mRNA downstream 62744 30606528 ~ 30612443 (-) False LOC120572838
XM_039822321.1 mRNA downstream 62744 30606528 ~ 30612443 (-) True LOC120572838
XM_039822322.1 mRNA downstream 63633 30606528 ~ 30611554 (-) False LOC120572838
XM_039821924.1 mRNA upstream 152616 30829613 ~ 30831330 (-) True LOC120572603
XM_039822429.1 mRNA upstream 184521 30861518 ~ 30867390 (-) True LOC120572909
XM_039822461.1 mRNA upstream 289812 30966809 ~ 30969290 (-) False LOC120572931
XM_039822459.1 mRNA upstream 289812 30966809 ~ 30968672 (-) True LOC120572931
XM_039822460.1 mRNA upstream 289812 30966809 ~ 30968285 (-) False LOC120572931
XR_005641506.1 other downstream 165161 30503116 ~ 30510026 (-) False LOC120572891
XR_005641505.1 other downstream 165161 30503116 ~ 30510026 (-) True LOC120572891
XR_005641504.1 other downstream 200612 30470495 ~ 30474575 (-) False LOC120572884
TU199660 other downstream 243396 30430992 ~ 30431791 (-) False LOC120572874
TU199640 other downstream 348367 30299732 ~ 30326820 (-) False G147699
TU199667 other upstream 152973 30829970 ~ 30831320 (-) False LOC120572603
TU200398 other upstream 930054 31607051 ~ 31608486 (-) False G148246
TU200397 other upstream 1040375 31717372 ~ 31737682 (-) False G148246
TU200566 other upstream 1486059 32163056 ~ 32167375 (-) False LOC120572607
TU200650 other upstream 1696081 32373078 ~ 32375549 (-) False LOC120572607

Expression Profile