LOC120572838


Basic Information

Item Value
gene id LOC120572838
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30606528 ~ 30612446 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822320.1
GAATTTCAGTGTTAATTGACGTTACGGCCGAATAGTATCTTAGCTATTTGAGAAAATGTCATGACAAAACTTTATTTATGACACTAGAGAGAATCTTGGGCCAGGAACAGTTTGTGTTAAACTGTTTTTATAACTCTGAATTTTGTATCTCTACATGAGGACAGGACAGAAAGACCTCTTTCCCTTCATGTCTGTAACTTCAGAGAAATGACAACaatcacaaataaacacatatggaaATAATCCTCTTTAAGAATATGTGATCACAAACAATGTTTATCTCTACAGATGTATACTTAAAGTTTCCTGTCTACTGCAGAGGAAACCAGACATTAAAAGCACACAGAGGAAATGGTGGTTTTGCTGCTTTGAGTCAAACATTCAAAGTGCTCGATGTCACATCACCAACAGGTACGATGGGACAGACATCTCTGCAATGGCTGATCTTTGTGACCTCACTGCTGACCAGCACAACACACCAAGTCTCTCTGACTATGAGTCCCAGCAGCTCTCAGATGTTTCAAGGACAGTTTGTCTCTCTGAGGTGTGAGGAGGAcgacagctctgctggatggactctgaggaggaacacaAGTGATAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCCACATGGTCACATGGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacatcatcaccatcactgtcactgatggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtagAACAAAGACGACCACCAACTCCACACctggtttctataaagatggctccTTCATTGGGAATGAGCATGaaggtcacatgaccatccaccatgtttccaggtctggtgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagAGAAACCAAAGACCACAGGCCCTCCAACCTCTGCAGCTCCGCCCCCGGCCTCAGACCCCGTCCACCTTGTGTTCAGACTGGTCTGCCACCATGTGGGGTTCTGTCCTCACTTCATCTCCACCATCATGGTTTCTTTATATTGACACAGACCAACAGGAAATTATCTACCTGTTTCCATGGCAGCAGCCTACCCACCCAAGCTGGTGGAGTTCTTG
>XM_039822321.1
GAATTTCAGTGTTAATTGACGTTACGGCCGAATAGTATCTTAGCTATTTGAGAAAATGTCATGACAAAACTTTATTTATGACACTAGAGAGAATCTTGGGCCAGGAACAGTTTGTGTTAAACTGTTTTTATAACTCTGAATTTTGTATCTCTACATGAGGACAGGACAGAAAGACCTCTTTCCCTTCATGTCTGTAACTTCAGAGAAATGACAACaatcacaaataaacacatatggaaATAATCCTCTTTAAGAATATGTGATCACAAACAATGTTTATCTCTACAGATGTATACTTAAAGTTTCCTGTCTACTGCAGAGGAAACCAGACATTAAAAGCACACAGAGGAAATGGTGGTTTTGCTGCTTTGAGTCAAACATTCAAAGTGCTCGATGTCACATCACCAACAGGTACGATGGGACAGACATCTCTGCAATGGCTGATCTTTGTGACCTCACTGCTGACCAGCACAACACACCAAGTTGTGTTTAATGGCAGTAGAGATGATTTTTCCCCTTGGTGCAGTCCGTTTACTCTCTCTGACTATGAGTCCCAGCAGCTCTCAGATGTTTCAAGGACAGTTTGTCTCTCTGAGGTGTGAGGAGGAcgacagctctgctggatggactctgaggaggaacacaAGTGATAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCCACATGGTCACATGGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacatcatcaccatcactgtcactgatggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtagAACAAAGACGACCACCAACTCCACACctggtttctataaagatggctccTTCATTGGGAATGAGCATGaaggtcacatgaccatccaccatgtttccaggtctggtgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagAGAAACCAAAGACCACAGGCCCTCCAACCTCTGCAGCTCCGCCCCCGGCCTCAGACCCCGTCCACCTTGTGTTCAGACTGGTCTGCCACCATGTGGGGTTCTGTCCTCACTTCATCTCCACCATCATGGTTTCTTTATATTGACACAGACCAACAGGAAATTATCTACCTGTTTCCATGGCAGCAGCCTACCCACCCAAGCTGGTGGAGTTCTTG
>XM_039822322.1
TTGTGACCTCACTGCTGACCAGCACAACACACCAAGATGCAAACTTACAAGTTTTCACTGTCTCATTTAGTTGTGTTTAATGGCAGTAGAGATGATTTTTCCCCTTGGTGCAGTCCGTTTACTCTCTCTGACTATGAGTCCCAGCAGCTCTCAGATGTTTCAAGGACAGTTTGTCTCTCTGAGGTGTGAGGAGGAcgacagctctgctggatggactctgaggaggaacacaAGTGATAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCCACATGGTCACATGGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacatcatcaccatcactgtcactgatggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtagAACAAAGACGACCACCAACTCCACACctggtttctataaagatggctccTTCATTGGGAATGAGCATGaaggtcacatgaccatccaccatgtttccaggtctggtgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagAGAAACCAAAGACCACAGGCCCTCCAACCTCTGCAGCTCCGCCCCCGGCCTCAGACCCCGTCCACCTTGTGTTCAGACTGGTCTGCCACCATGTGGGGTTCTGTCCTCACTTCATCTCCACCATCATGGTTTCTTTATATTGACACAGACCAACAGGAAATTATCTACCTGTTTCCATGGCAGCAGCCTACCCACCCAAGCTGGTGGAGTTCTTG
>XM_039822323.1
AATGAATTTCAGTGTTAATTGACGTTACGGCCGAATAGTATCTTAGCTATTTGAGAAAATGTCATGACAAAACTTTATTTATGACACTAGAGAGAATCTTGGGCCAGGAACAGTTTGTGTTAAACTGTTTTTATAACTCTGAATTTTGTATCTCTACATGAGGACAGGACAGAAAGACCTCTTTCCCTTCATGTCTGTAACTTCAGAGAAATGACAACaatcacaaataaacacatatggaaATAATCCTCTTTAAGAATATGTGATCACAAACAATGTTTATCTCTACAGATGTATACTTAAAGTTTCCTGTCTACTGCAGAGGAAACCAGACATTAAAAGCACACAGAGGAAATGGTGGTTTTGCTGCTTTGAGTCAAACATTCAAAGTGCTCGATGTCACATCACCAACAGGTACGATGGGACAGACATCTCTGCAATGGCTGATCTTTGTGACCTCACTGCTGACCAGCACAACACACCAAGGTGTGAGGAGGAcgacagctctgctggatggactctgaggaggaacacaAGTGATAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCCACATGGTCACATGGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacatcatcaccatcactgtcactgatggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtagAACAAAGACGACCACCAACTCCACACctggtttctataaagatggctccTTCATTGGGAATGAGCATGaaggtcacatgaccatccaccatgtttccaggtctggtgaaggcctctacaagtgtctcatcagcagtgttggagagtctccacccagctgggtctctgtcacagAGAAACCAAAGACCACAGGCCCTCCAACCTCTGCAGCTCCGCCCCCGGCCTCAGACCCCGTCCACCTTGTGTTCAGACTGGTCTGCCACCATGTGGGGTTCTGTCCTCACTTCATCTCCACCATCATGGTTTCTTTATATTGACACAGACCAACAGGAAATTATCTACCTGTTTCCATGGCAGCAGCCTACCCACCCAAGCTGGTGGAGTTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822320.1 False 1205 mRNA 0.47 6 30606528 30612443
XM_039822321.1 True 1257 mRNA 0.46 7 30606528 30612443
XM_039822322.1 False 844 mRNA 0.51 6 30606528 30611554
XM_039822323.1 False 1147 mRNA 0.46 6 30606528 30612446

Neighbor

gene id symbol gene type direction distance location
LOC120572861 NA coding downstream 111720 30491796 ~ 30494808 (-)
LOC120572893 NA coding downstream 138903 30463330 ~ 30467625 (-)
LOC120572894 NA coding downstream 155601 30449053 ~ 30450927 (-)
LOC120572951 NA coding downstream 183828 30417588 ~ 30422700 (-)
LOC120572857 NA coding downstream 189284 30406991 ~ 30417244 (-)
LOC120572837 NA coding upstream 16863 30629309 ~ 30678682 (-)
LOC120572880 NA coding upstream 40116 30652562 ~ 30666590 (-)
LOC120572931 NA coding upstream 354363 30966809 ~ 30969290 (-)
LOC120572930 NA coding upstream 496985 31109431 ~ 31126250 (-)
LOC120572825 NA coding upstream 608142 31220588 ~ 31222767 (-)
LOC120572999 NA non-coding downstream 9769 30594912 ~ 30596759 (-)
LOC120572974 NA non-coding downstream 91477 30513652 ~ 30515051 (-)
G147733 NA non-coding downstream 119495 30484276 ~ 30487033 (-)
G147735 NA non-coding downstream 135250 30444419 ~ 30471278 (-)
G147738 NA non-coding downstream 151772 30454000 ~ 30454756 (-)
G147762 NA non-coding upstream 90149 30702595 ~ 30708393 (-)
G147767 NA non-coding upstream 127196 30739642 ~ 30746752 (-)
LOC120573057 NA non-coding upstream 142697 30755143 ~ 30757393 (-)
G147774 NA non-coding upstream 175434 30787880 ~ 30795476 (-)
LOC120573027 NA non-coding upstream 209462 30821908 ~ 30827021 (-)
LOC120572891 NA other downstream 96502 30497065 ~ 30510026 (-)
LOC120572884 NA other downstream 131645 30470495 ~ 30474883 (-)
LOC120572874 NA other downstream 173285 30430801 ~ 30433243 (-)
LOC120572840 NA other downstream 289305 30278333 ~ 30317223 (-)
LOC120572750 LOC106608414,LOC107673152,LOC108275467,LOC107574437,LOC107750191 other downstream 483652 30105360 ~ 30122876 (-)
LOC120572909 NA other upstream 188363 30800809 ~ 30867390 (-)
LOC120572603 NA other upstream 217167 30829613 ~ 30831330 (-)
LOC120572919 NA other upstream 434200 31046646 ~ 31056385 (-)
LOC120572802 NA other upstream 665531 31277977 ~ 31673624 (-)
G148246 NA other upstream 816482 31428928 ~ 31737682 (-)

Expression


Co-expression Network