LOC120572874


Basic Information

Item Value
gene id LOC120572874
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30430801 ~ 30433243 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU199660
ctctctgactgtgagtccCAGCAGCTCTCAGTTCTTCAGCTGGAcatctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCATAAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAACAATGCTGGTTCTTCTTGTAACATCAGCTACATGGCCCCATCGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcagcatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgacggagggagaagacctcactctgacctgtaaaacaaagacgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgagcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgcaacatcagcagtgttggagagtctccacccagctgggtctctgtcacGGAGAAACCAAAGACCACAAGCCCTCCTACGACCCCAAGCCCTGCTACGACGAGTACTCTGCCACCCTCTTACACAACCTCAGACCCTCTCCCCCTAGTGGTCATACTGTTTTGCCACCTGGTGGTGTTCTGTCCGTACTGCATC
>XM_039822382.1
acaacaacgttcATCATTCATCAACACTATCAACTGCAGGAGGGGAAACCACACAGTTGCTGCACCCCCACATCCCTCCACCTCCAAAAAGAGGAAATGGTGGTTTTAGCTGATCTGAGTAAAACATTCAAAGTGCTTGATGTCACATCACCAACAGGTACGATGGGACAAACATCTCTGCAATGGCTGATCTttctgacCTCACTGCTGAGCAGCACAACAAACCAAGtctctctgactgtgagtccCAGCAGCTCTCAGTTCTTCAGCTGGAcatctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCATAAAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAACAATGCTGGTTCTTCTTGTAACATCAGCTACATGGCCCCATCGCACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcagcatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgacggagggagaagacctcactctgacctgtaaaacaaagacgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgagcctgcaggtcacatgaccatccaccatgtttccaggtctgatgaaggcctctacaagtgcaacatcagcagtgttggagagtctccacccagctgggtctctgtcacGGGTGAGGAGGTTACCTTTGATTTCAGGAGTTCATTCATCCAGATATTCACCTGACAGCTGATTCTCTCTGCAGAGAAACCAAAGACCACAAGCCCTCCTACGACCCCAAGCCCTGCTACGACGAGTACTCTGCCACCCTCTTACACAACCTCAGACCCTCTCCCCCTAGTGGTCATACTGTTTTGCCACCTGGTGGTGTTCTGTCCGTACTGCATCTCCACTTTCATCATGGTGTCTTTATATCGACACAGGACCACAGGAAATGGCCTacctgttgccatggtgatgacCTTGCCCACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199660 False 649 TUCP 0.53 3 30430992 30431791
XM_039822382.1 True 1036 mRNA 0.51 5 30430801 30433243

Neighbor

gene id symbol gene type direction distance location
LOC120572951 NA coding downstream 8101 30417588 ~ 30422700 (-)
LOC120572857 NA coding downstream 13557 30406991 ~ 30417244 (-)
LOC120572898 NA coding downstream 35621 30393547 ~ 30395180 (-)
LOC120572599 NA coding downstream 55767 30335268 ~ 30375034 (-)
LOC120572856 NA coding downstream 100752 30324313 ~ 30330049 (-)
LOC120572894 NA coding upstream 15810 30449053 ~ 30450927 (-)
LOC120572893 NA coding upstream 30087 30463330 ~ 30467625 (-)
LOC120572861 NA coding upstream 58553 30491796 ~ 30494808 (-)
LOC120572838 NA coding upstream 173285 30606528 ~ 30612446 (-)
LOC120572837 NA coding upstream 196066 30629309 ~ 30678682 (-)
G147724 NA non-coding downstream 74693 30296425 ~ 30356108 (-)
G147710 NA non-coding downstream 176050 30225225 ~ 30254751 (-)
LOC120572986 NA non-coding downstream 195785 30234172 ~ 30235016 (-)
G147698 NA non-coding downstream 258157 30171413 ~ 30172644 (-)
G147658 NA non-coding downstream 298814 30100012 ~ 30131987 (-)
G147735 NA non-coding upstream 11176 30444419 ~ 30471278 (-)
G147738 NA non-coding upstream 20757 30454000 ~ 30454756 (-)
G147733 NA non-coding upstream 51033 30484276 ~ 30487033 (-)
LOC120572974 NA non-coding upstream 80409 30513652 ~ 30515051 (-)
LOC120572999 NA non-coding upstream 161669 30594912 ~ 30596759 (-)
LOC120572840 NA other downstream 113578 30278333 ~ 30317223 (-)
LOC120572750 LOC106608414,LOC107673152,LOC108275467,LOC107574437,LOC107750191 other downstream 307925 30105360 ~ 30122876 (-)
LOC120572598 nfxl1 other downstream 343577 30068430 ~ 30087224 (-)
G147653 atp6v1g1,LOC103369321,LOC101172700,LOC106512071 other downstream 371598 30056592 ~ 30059203 (-)
G147634 prpf4 other downstream 389216 30036418 ~ 30041585 (-)
LOC120572884 NA other upstream 37252 30470495 ~ 30474883 (-)
LOC120572891 NA other upstream 63822 30497065 ~ 30510026 (-)
LOC120572909 NA other upstream 367566 30800809 ~ 30867390 (-)
LOC120572603 NA other upstream 396370 30829613 ~ 30831330 (-)
LOC120572919 NA other upstream 613403 31046646 ~ 31056385 (-)

Expression


Co-expression Network