G147653 (atp6v1g1,LOC103369321,LOC101172700,LOC106512071)


Basic Information

Item Value
gene id G147653
gene name atp6v1g1,LOC103369321,LOC101172700,LOC106512071
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30056592 ~ 30059203 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU199526
atttatttaacaataaTCAATAATCTCTCTTTAACGTCACAGTttcagccaatcaacactcagTTTATTATTTCATCATCACTTCACAAACGTCAACAGGAAGTCACATggtcacacacagaaaacaatcAAAAAACTGCAGAAACGCACAGgagtttcacaataaaagcctcgGGACTTCCTCAGCCAATCAGGCAAGAACAGAGACAAACTGTGGCTCCTGATTGGAGGAGAGTTCAGAGAACAACAACCAATCAGCTTCAGTTAGATTCTTTTATTCTTTAATTTTACTAGAAGCTGGATCCTGATTGGCTGATTTTCTCTTCGAAGCTtcagagacttttattttgttagATTCAGGAAAGATTTTAAGAAATTAACTCTtaagatttaatttattaatataaatactTCGTAAACATCAACACAGTAACAACATTTAGGAACGTGTGTTTTTCGGAGCTTAGAACAGGAAGTGACGAGCTTcaatccttcaaaataaaacaccttttTTCCCagataaacttaaaaaaaaaaggtttttggcTGTGATTGAAGCTAACGAAGCTAATGATGCTAACGTCCTGTGTTAGCCCCGCCCCCCCACCTCTCTGAGGGCTCGTGCCCCCCACCACCATTTTATCCCGCCACGCGGTAGTTGGCGTGGAACTCGGGCTTGATGTCACAGACGCGGCGCAGCAGCTCTCCCAGCACGGCCTCCCGGTTGCCGCGGTAACTGGCCTGGATGTGACTCATGCGCTCCACCGTGTCGCGGTCCACCTCCACCGCGCTGTTGCCGTGGGAACCAAGGGcTGCAGCCTCTTTGGTCTTGaactccttctctctctgcagacGGTACTGCTCGATCTCAGCCTGGGCCTCTTCTTTAGCCTGCTTCAGACGACGGTTCTTACGTTTGCGGGCCTCGGCCACCTTCTCCGCGGCTCTCTTCTCGGCCTGCAGCAGCTGCTGGATGCCCTGGGACTGGCTCGCCATGTTGGctcaaaacacagagacacgcgACAGATTCACGAGCTGAAGGTCGACGgagtcctcttcttcttcttcttcttcctctgttgACTGCAGTCAGCTGATGCACGTCACG

Function

symbol description
atp6v1g1 Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to act upstream of or within proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase complex. Is expressed in mucus secreting cell; nervous system; and yolk syncytial layer. Orthologous to several human genes including ATP6V1G1 (ATPase H+ transporting V1 subunit G1).

NR:

description
PREDICTED: V-type proton ATPase subunit G 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199526 True 1108 TUCP 0.47 3 30056592 30059203

Neighbor

gene id symbol gene type direction distance location
LOC120572594 nfxl1 coding downstream 251691 29794709 ~ 29804901 (-)
LOC120572768 eif5b coding downstream 298036 29745355 ~ 29758556 (-)
LOC120572590 NA coding downstream 381638 29660300 ~ 29674954 (-)
LOC120572743 baz1a,LOC106510828 coding downstream 401778 29645396 ~ 29654814 (-)
LOC120572921 NA coding downstream 500009 29553754 ~ 29556583 (-)
LOC120572852 NA coding upstream 114615 30173818 ~ 30177125 (-)
LOC120572850 NA coding upstream 157629 30216832 ~ 30224798 (-)
LOC120572839 NA coding upstream 205502 30264705 ~ 30269894 (-)
LOC120572886 NA coding upstream 214790 30273993 ~ 30278269 (-)
LOC120572856 NA coding upstream 265110 30324313 ~ 30330049 (-)
G147672 NA non-coding downstream 2892 30053030 ~ 30053700 (-)
G147669 NA non-coding downstream 5295 30050010 ~ 30051297 (-)
G147656 NA non-coding downstream 36774 30018986 ~ 30019818 (-)
G147655 fer,LOC103130344 non-coding downstream 44725 30011273 ~ 30011867 (-)
G147631 NA non-coding downstream 103060 29911365 ~ 29953532 (-)
G147678 NA non-coding upstream 28796 30087999 ~ 30091822 (-)
G147657 NA non-coding upstream 38572 30097775 ~ 30099840 (-)
G147658 NA non-coding upstream 40809 30100012 ~ 30131987 (-)
G147659 NA non-coding upstream 43651 30102854 ~ 30113069 (-)
G147698 NA non-coding upstream 112210 30171413 ~ 30172644 (-)
G147634 prpf4 other downstream 15007 30036418 ~ 30041585 (-)
cdc26 cdc26 other downstream 20703 29981706 ~ 30035889 (-)
G147636 NA other downstream 37701 29925195 ~ 30018891 (-)
LOC120572943 NA other downstream 158254 29849248 ~ 29898338 (-)
LOC120572595 LOC103365268,LOC100698167,LOC101474678,LOC102295575,LOC106928568,LOC106958959 other downstream 195525 29849040 ~ 29861067 (-)
LOC120572598 nfxl1 other upstream 9227 30068430 ~ 30087224 (-)
LOC120572750 LOC106608414,LOC107673152,LOC108275467,LOC107574437,LOC107750191 other upstream 46157 30105360 ~ 30122876 (-)
G147699 LOC106456568 other upstream 124058 30183261 ~ 30676997 (-)
LOC120572840 NA other upstream 219130 30278333 ~ 30317223 (-)
LOC120572874 NA other upstream 371598 30430801 ~ 30433243 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G252061 NA unknown CI01000059 null 2069478 ~ 2069578 (+)
eurasian perch (Perca fluviatilis) G211151 NA unknown NC_053132.1 CM020929.1 10053261 ~ 10062702 (+)