RNA id: TU200397



Basic Information


Item Value
RNA id TU200397
length 800
RNA type TUCP
GC content 0.47
exon number 4
gene id G148246
representative False

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31428928 ~ 31737682 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tattattactgctTCCTGtagctgttgctgctgcagtgGTTGTTGTCTGGAAGAGGCAAAGACAAAGACggatataaagagaacagtTGTGATGGAGGTACCAGGGGTCTGCGGAGAGAAGGCCATTCTGCGATGTCAGGCTGATGATTCCTCCATCATAGCTGTAGAGTGGAGCAGAACTGACCTGAAGCCAGATCCCATCCTCTCATACAGAGATGAATGGTTGGTTCCAAGCTACCCACATGCTGAGTATAAGGAGGACAAGGTGGAGCTGGAGGACAGAGATCTGAAGAATGGAAACATGTCTTTAATTCTGAAGAATGTTAGCACCACTGACCAAGGAATATACGAGTGTCGGAGTAACATCAACCGGTTCAAGATGGAAAAATATTCCCTTCCTCCGCTCTGAGCCGATCAGAATCATCCGTCTGCAGGTTACAGAGCCAGCAGacctgATTTTGTTAACAGTGCACCCTGGAGATGATGCCATTCTACCATGTCAGGCTGCTGATCCCTCCATCATAGCTGTAGAGTGGAGCAGACCTGACCTGAAGCCAGATAACCCCTCCTTTATACAGTAATGTACGCTTCAATACAACCCAAAAGCATCCATCCTTTAAGGACAGGGTGGACCTGGTGGACAAAGAGCTGAAGGACGGAGACGCGTCTTTAAAACTGAAGAATGTGAGCAGCATCGACACTGGAACATACAAGTGTTGGGTTACAGTAGCAGTAACCGATTCCTGTTACCTATTCAGAACCATCAGAATCATCCATCTGCAGGTTCCAGAGATGGAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641568.1 lncRNA downstream 53075 31662358 ~ 31664297 (-) False LOC120572994
XR_005641569.1 lncRNA downstream 53075 31662358 ~ 31664297 (-) True LOC120572994
XR_005641606.1 lncRNA downstream 82727 31632948 ~ 31634645 (-) True LOC120573032
TU200430 lncRNA downstream 136970 31428928 ~ 31580402 (-) True G148246
TU200385 lncRNA downstream 267920 31446830 ~ 31449452 (-) False G148246
XR_005641587.1 lncRNA upstream 55434 31793116 ~ 31794016 (-) False LOC120573013
TU200557 lncRNA upstream 55443 31793125 ~ 31879719 (-) False LOC120573013
XR_005641611.1 lncRNA upstream 57122 31794804 ~ 31798984 (-) True LOC120573038
XR_005641626.1 lncRNA upstream 161158 31898840 ~ 31899802 (-) True LOC120573055
TU200580 lncRNA upstream 186701 31924383 ~ 32342316 (-) True G148360
XM_039822251.1 mRNA downstream 43748 31277977 ~ 31673624 (-) True LOC120572802
XM_039822162.1 mRNA downstream 93559 31435815 ~ 31623813 (-) False LOC120572747
XM_039822159.1 mRNA downstream 93559 31435815 ~ 31623813 (-) True LOC120572747
XM_039822160.1 mRNA downstream 93559 31435815 ~ 31623813 (-) False LOC120572747
XM_039822161.1 mRNA downstream 93560 31435815 ~ 31623812 (-) False LOC120572747
XM_039821928.1 mRNA upstream 394654 32132336 ~ 32375524 (-) True LOC120572607
XM_039822253.1 mRNA upstream 644071 32381753 ~ 32419579 (-) True LOC120572803
XM_039822254.1 mRNA upstream 671661 32409343 ~ 32419579 (-) False LOC120572803
XM_039822256.1 mRNA upstream 702966 32440648 ~ 32448330 (-) True LOC120572804
XM_039822255.1 mRNA upstream 703473 32441155 ~ 32448330 (-) False LOC120572804
TU200398 other downstream 108886 31607051 ~ 31608486 (-) False G148246
TU199667 other downstream 886052 30829970 ~ 30831320 (-) False LOC120572603
TU199644 other downstream 1040375 30675187 ~ 30676997 (-) False G147699
XR_005641506.1 other downstream 1207346 30503116 ~ 30510026 (-) False LOC120572891
XR_005641505.1 other downstream 1207346 30503116 ~ 30510026 (-) True LOC120572891
TU200566 other upstream 425374 32163056 ~ 32167375 (-) False LOC120572607
TU200650 other upstream 635396 32373078 ~ 32375549 (-) False LOC120572607
TU200707 other upstream 960639 32698321 ~ 32700405 (-) True G148453
TU200744 other upstream 993398 32731080 ~ 32755361 (-) True G148472
TU200833 other upstream 1207663 32945345 ~ 32945806 (-) True G148536

Expression Profile