LOC120572879


Basic Information

Item Value
gene id LOC120572879
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32703748 ~ 32731692 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU199900
AGTCCGGCTGTAACACGGAGGATTTTCCCCCGCAGTATTGATCTGTTCTCTGCGGATTATAATGTCGACAAAGACGGACAGAGGGATCCGGGAACCGCGTTGGGTGACGGGGGAAAGCTCGGCGGCTCTTCCGGTGATGTGCCGAAAATCTTCGCTTTCAGCGGTCTGTAGCCTACAGAAATATTTATCCGAGAAAGGGTGACTGTGAGGCggatacagagcaccgcgagggGACGGTCCTTTCACCGGGGGCTGttgcaataaaaatgtatgcgacaaaaggtgactgtcctgCGGCGGTGACAGTTACGttaaggcaccaaaacgactagtcaAAGTAAAACAGAAGATTAGGCAGAATGAGGGATATCTCCGGACCACCACCGGCAGAGACGGACACATGGATCCGGACATCGCGCTCGGTGGCGGGGGAAAGCTCCGCGGCTCCTCCGGCAGCAACAACCAGGAAGAAGAGACACCGTGAGAGGacCTGATTGAGGTAACAGTGCATCCTGGAGATGATGTCATTCTGCCATGTCAGGCTGCTCATCCCTCCATCAGAGCTGCAGAGTGGACCAGACCTGACCTGGAGGAGCCAGAATACGTCCTGTTATACAGAGATGGACACCTGGATCCAACCTACCAGCATCCAGACTTTAAGGACAGGGTggagctggtggacagagatGTGAAGGACGGAGACGTGTCTTTAAATCTAAAGAATGTGAGCAGCATCGACAACGGAACATACGAGTGTCGAGTTGCACCAGCTGGTTCAAGACGTAGAAAGAGAGCCATCATTGACTCggagccaatcagaatcatccGTCTGCAGGTTCCAGAGCCAGCAGGTTCTGAGAATAGAAACTCCTCTACTGTCGGCCGATACCGTGGACTGGCAGCAGGTGTTGCAGGTGTTCTGCTTCTTGTAACCGTTGCAGTCCTGAAATATAAAAGACATAAGAACAAGACATCAGGACCAcctgctgctgatgatgatgatgaagcatCGGGCGATAAGTTCATCTGACAACTCCCAGAGCTCTTCACACCTGACTGTTTTCTCAGGTGCTGTATATTCAAGACTTCTCTTTCTGTGTGAGGTCATGTTgaaatctgctgtttgtttttctcttcccTCTATGAAATCCACAtacttttttaaaagtaaaagtactgttagtacaaagacattttactcaagtaaaagttctgttactttaaagaaaaacaaagttacTTAACTAAACATACTTTGAATGAATtgtagtaaaaacaaaaacaaagtaaggCTACTTATTTGATACCTGAAAATTGTGCTCAGATAAAAGATAAGTCATTAAAATGTTCTTTAAGAGCAGAATGAAGTAGAAAAAAGAGATTTTCAGACAATATAAACTCAGCAGCAGTACACAGAAATACTTTGCTCCattaaatgagaaaatgtaaTCTATTACTTCAGCCCAGCTCTACTCGGAGCGGATATATTACAGCAAGTTTTTAACAGAAAATGATGTTTCTTTAGTTGTAAATATCAGCAAGAGCACCCACCAAATATCTTCTAATCAGGTGTAGAGAGCTCTTCAACATGTCATCGATTTGTATGTTTGATCGAGTTAACATTTTATATGGAGGGAATTTTAAATGATTGTTTTCTGCTGGGTAATATAAAGCCTTGTGTTGCCTGCTTGGAATGATTTCTTGCAGCTAATGATTTAAAATCAACTAACCTTGAATGGTTTAAACTGAGGAGTTTATTACATTGTGAATATTGttattgtaattataaaatCATCTGATGCAGATCAGAATATCTCAGGGGGACATAGAGGAccagtctgtctctaaataaGACCTTAAACTGTATAGCcaactgttttttttggaaACGGGTTAAAGTCTACCTAGATAAGAGTTATTGTGGAGGTGCTGTCTTCCTAGACCTAAGGCAAGCTTTTGATACTGTTCATCACGAAGTTCTTTTATCTAAATTAACATATTTAAGTTTCTCTGAGCAAGCTCTCAACTGGATGATCGCATTCCCCCGCcaggaaccaagacaccgcggAAGACTCGAGCGGttgcggttacattcggtctcgacatactatttacacactcatactgaccgacactagactcacgcactggccacggttacattcggtgaGCAGTCTCCTCATGACAGTCTaactaccatgtagcaacattcacttctaacatttaacttaaaataactactaagataacatgatgtgtatttgtatgtgatataataatttccccttggtaatgtagcctataaatttccatgaacacaattctaaaatgcacgagacataaaggcttctgctatcAGTTGATAACtaaaacttgccgagaacctagacacccgtgaTTACGTAAACGTCAACGGTTTGTTTTTGGAAAAGGTTAAAGGCTACCtagtagggctttgactccgaacttcgttattcgaatatcattcgaatatttaaaaaaataatgatattcgaacgaatattagccagcccttaatattcgaacctgttatgggcattgttttttgtaaatgagtttgcttgtaaacgttgttttcagttcagattccgaggctttttcacgcatttcaaaatgtaactacacgtcgcggcgacgcacgcgTTCTCGGCCGGGCtcggtagcggtgcattccccccaaattctcaaagaaggtggctggcccagggccaggccagctcagcggcgtctttctcccgtcgcgttccgctgtctctcctacctacaccggcgccgcaccctgtcccttctccccttcctacCTGCCTGCCCATGTGgcgagagagcacagaggggagggcggggctgctcctctgtcacacaacagaagagaaaggggatttcggcggccacaggagagaaatacattgcgtgctcgctggacaatactgccgactctttttttattttacagaaagtcgctgtcttttctacagaaagtcgccacatttgtcgctagtcgcttttgtgaaaaaaagtcgctaaattggcaacaccgcccacaccagcacacgagtataaacatcagaccacttacgtaggctacggtgaaagctccgaacttcctgtcgaaagcacactgtttgtgtttaatccagggtctgacttaatttttttttttaacctgaaggcatttaatggtcaaaatattattaataaatattcgaatatatttgaatattaatattaatttacaaacgaacttcgaatatgatttttgggaaAAAGTCAAAGGCCTACTACCTAGATGTTTGGTCCTGTCTTCCTAGACCTAAGGCAAACTTTTGATACTGTTAATTACACTGTTCTTTTATCTAAATTaacatattttaattaattaatttgataCAATCATACCTGTCCAGTTGAAAGCAATATGTTCTTATTAATGATTCAAAGTCCCCACTCTGTGAATGTCCAGTGCCCTCAAGGCTCCATGATTGGTCCAATCCTGTTTACACTGTATATAAATGATCTGCCAGaggcatgtaaacatgttgatgttcagatgtatgcagatgatgctgtaatctttacacatgcTAAGAACTACCAAGAGATGGCATCCACACTTACATCTACAATGGCTCACATTGATGACTGGCTCACAAAGTCATGTCTCTATCTAAACACCAAAAAAACAGTCTGTATGGCGTTTACCAAATAAAACATGAAGGTGTCACAATCTAATGTCTTCCTTAGAGGACAGGTGCTTGATATTGTTAATGAATTAAAGTATCTAGGAGTCATATATGACTCCACCCTAACATTCAAACGCCATGTAAAAAAGGTGGGAAATAAAGTTAAATTCAATTTGCAGAATTTTAAACAAGTTAGGCCATTTCTGGACACCAAAGCTGCCAAGTTGTTCTTATATACTATAATCTTTTCATACATTGAGTTATGTTTTACTAACTGGTCATTAACTAGCATAAATACTCTTAAAAGCATTGAATCTTTATTTAAGAAAGCCATGAAAACTTTTGATAAAAAGGGGCATTGTCATTTCACCATTGCAATATCTTACAGATACATATATTTTTAAGCTTTGACAATTTCAAGCATTTCAAGTAGGACTGCTGCATGGCTTTTTCCAAAGACTTGAAAGCAGAGGTGTCCTACCATTTAGATGCACCACTTCTGGCCAAAATATATTGTCAATATTAGGAGGTAAACTCTGGAATGGCTTGTCCCTCCCAATAAGAGTCCTACATTCAACACCTTTAAAATACTCTTAAAACAAACCAAAGATGCTGACTCACTTTTAACTGTCACACATTTCATCACCCAGACACTTTCACTGTTAAACTGAATGCAGTATAGAATTGGATGAATAACGTCTTTGTCATcgtgtatttttgttttgtttttgtcaatgtATATGTTAGTCATTATGTGTAAATTTTAATTTATAGTGAATGAGTATGAGTTtactaattctggcatatttacatattttgttttatttgcagatTGGCTCAAAGTATTGTGTGTTCTGatcaaataaaaacagtatttatatgttacTCATTTGCACGTTTATTAGACTTCAGTGTGAGATGTTTACATTGTTATTGTAGAAGATGAATGTGAAATCATGTGAACAATGTGAGAGAAAAATGTCTCATTTTATTTCCTTTAGTCGTGATTAAAAAGAGAAGGTGCAGTACGTCCAGATTTAAAGCTAATTAAAGGCTTTGAGAGGCTTCTCTGTCTTTCATTGTTTACATGTATCGGCATAAAACTATTTCTAAGTCAGgactgtttgaaaatgaaaatccatTTCAGGTGagatcattagttgcagctctatcTGACTTTGTGATACTTGTGTTATGTTTTATGCAAGACTAGTGTTTACCTGTCGTATAAcgttaagaataaaaaaaaagagtagctCAAACTTTCTCGGGCACTGATTGGCTGAGGGGAAGCAGAGGATGTCTTCATTCATAGCGAGCagcgcagagacacacagaccgaCATTAGTGGACCAGAGTCCGGCTGTAACACGGAGGATTACCCCCCCAGTATGGATCTGTTCTCTGCGGATTATAATGTCGACAAAGACGGACAGAGGGAACCGCGTTGGGTGATGGGGGAAAGCTCGGCGGCTCCTCCGGTGGTGATCCGAAAATCTCACCCCCGCTATCCTACGCTTTCAGCAAGACGCTGAACTTGGCTCCACATTCGCTCCGGTTCTCTTT
>XM_039822387.1
ctgtccccagcacatttcaaaccaaactgacgcccattAACTTACCCGTATCTCCATCTGGAAAATAATTCGATTTCGTATTTTTGACCCTCTGAACCGTTGGACATGCCTCGGCATGAGACGAGACGGCTTGACCATGGGACGCTCCAGGCTGCGGCCATACCCGCCTCCTCCTTCTTGGAAACCGCAACAGCTGTTTTCAGGTTTCAACATGTTTTGCGCTGTCCTGTGTTTCCTGCTCCTCCTGCAGCTCTCTGCCTCCGAAAAGCCAGAGGAGTTAACGGTGAAGCCCGAGCAGGACGTTACTCTCGTGTGTCGGGCTCTCTCAGACGTCCCCGTCACTCTGCTGGAGTGGAACAGACGAGACCTGAAGGACGACGGCTACGTCTTCTTCTACAGGAACCAGCAAGCTTATGAGAGGTACCAGCACCCGCGTTACCGGGGCCGGGTGGAGCTGAGAGACCCGGAGATGAGGCACGGAGACGTCTCCGTTGTTCTGAAGGACGTCGGCGTCAACGACACCGGGACGTACGACTGTCGGGTTATAATCACCGGGGGCAACGAGAGAAGGCAGCTCATCAGCCTGACCGTAGCTGACTCCGATCCCCCAGCTGGACAGGAGGGCAGATATCCTGGACTCGTGGTCAGTCTGCCAGTTGCTGCAGTCCTTCTTGTTATTCTTCTTCTCATTTCTGTCTCTTTGTATTATATCATGTATAAACGGCGTAACGGTCCCACCAAGAATCCTTCATACAAAGCACCGAGGTGACCTGAGTGTCTGAGTCCTCCGTCTGAAAGAATCAACAGTTAAGAAGAGAAAAATCTGTTCAATAAGAGTTAAGGTTGTAGAAATGATGATCCAGCCGTTAGCACGCTCATATCAGTCGTTTGTGATTTTCATAATATCCAATCACACCTTTTGACTTCTCAAGCTTCAGCCTCTGAAAACTGGAATGTGTTCTACTATCTGTAATGAAAGCTTGCTAATGTTCTCCTGACAGTTAAATAAGCTCGTTAATGTTCTCCTGACAGTTAAATAAGCTCATTAATTTTCTCTGTTTCACTGACAAATTGAAATGGTAATGTTCAGACAGCTAATTGAATGTATAGATGTGTAACATTTCTGAATGTTTTCTTTATGTTTCACTTTCTGCACTTTAAATCTATGTTCTCATGTTGCACAGCACTCATCTCTTGACTTTTGttctataaataaatatgttaagattgaaaa
>XM_039822389.1
aaacacacacacagaccagttTGTGTTTGAGTCATTGTGCTGCAGTCCGATCCCACCCACTTCTGCACACGGAGCACAGCATACCTGACAGTGAACCTGTGTGTATAACGGCAGCATTCCTCCTGACAGCAGCAGGTCAGCTCTCTGTCAGCTCTCATGGCTCCATTAATGCTCCTGGTGTTCCTTCTGTCTGAAGCAGCTTCTGacCTGATTGAGGTAACAGTGCATCCTGGAGATGATGTCATTCTGCCATGTCAGGCTGCTCATCCCTCCATCAGAGCTGCAGAGTGGACCAGACCTGACCTGGAGGAGCCAGAATACGTCCTGTTATACAGAGATGGACACCTGGATCCAACCTACCAGCATCCAGACTTTAAGGACAGGGTggagctggtggacagagatGTGAAGGACGGAGACGTGTCTTTAAATCTAAAGAATGTGAGCAGCATCGACAACGGAACATACGAGTGTCGAGTTGCACCAGCTGGTTCAAGACGTAGAAAGAGAGCCATCATTGACTCggagccaatcagaatcatccGTCTGCAGGTTCCAGAGCCAGCAGGTTCTGAGAATAGAAACTCCTCTACTGTCGGCCGATACCGTGGACTGGCAGCAGGTGTTGCAGGTGTTCTGCTTCTTGTAACCGTTGCAGTCCTGAAATATAAAAGACATAAGAACAAGACATCAGGACCAcctgctgctgatgatgatgatgaagcatCGGGCGATAAGTTCATCTGACAACTCCCAGAGCTCTTCACACCTGACTGTTTTCTCAGAGCCAGAGGAGTTAACGGTGAAGCCCGAGCAGGACGTTACTCTCGTGTGTCGGGCTCTCTCAGACGTCCCCG
>XM_039822390.1
GGTTCTGAGAATAGAAACTCCTCTACTGTCGGCCGATACCGTGGACTGGCAGCAGGTGTTGCAGGTGTTCTGCTTCTTGTAACCGTTGCAGTCCTGAAATATAAAAGACATAAGAACAAGACATCAGGACCAcctgctgctgatgatgatgatgaagcatCGGGCGATAAGTTCATCTGACAACTCCCAGAGCTCTTCACACCTGACTGTTTTCTCAGAGCCAGAGGAGTTAACGGTGAAGCCCGAGCAGGACGTTACTCTCGTGTGTCGGGCTCTCTCAGACGTCCCCGTCACTCTGCTGGAGTGGAACAGACGAGACCTGAAGGACGACGGCTACGTCTTCTTCTACAGGAACCAGCAAGCTTATGAGAGGTACCAGCACCCGCGTTACCGGGGCCGGGTGGAGCTGAGAGACCCGGAGATGAGGCACGGAGACGTCTCCGTTGTTCTGAAGGACGTCGGCGTCAACGACACCGGGACGTACGACTGTCGGGTTATAATCACCGGGGGCAACGAGAGAAGGCAGCTCATCAGCCTGACCGTAGCTGACTCCGATCCCCCAGCTGGACAGGAGGGCAGATATCCTGGACTCGTGGTCAGTCTGCCAGTTGCTGCAGTCCTTCTTGTTATTCTTCTTCTCATTTCTGTCTCTTTGTATTATATCATGTATAAACGGCGTAACGGTCCCACCAAGAATCCTTCATACAAAGCACCGAGGTGACCTGAGTGTCTGAGTCCTCCGTCTGAAAGAATCAACAGTTAAGAAGAGAAAAATCTGTTCAATAAGAGTTAAGGTTGTAGAAATGATGATCCAGCCGTTAGCACGCTCATATCAGTCGTTTGTGATTTTCATAATATCCAATCACACCTTTTGACTTCTCAAGCTTCAGCCTCTGAAAACTGGAATGTGTTCTACTATCTGTAATGAAAGCTTGCTAATGTTCTCCTGACAGTTAAATAAGCTCGTTAATGTTCTCCTGACAGTTAAATAAGCTCATTAATTTTCTCTGTTTCACTGACAAATTGAAATGGTAATGTTCAGACAGCTAATTGAATGTATAGATGTGTAACATTTCTGAATGTTTTCTTTATGTTTCACTTTCTGCACTTTAAATCTATGTTCTCATGTTGCACAGCACTCATCTCTTGACTTTTGttctataaataaatatgttaagattgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199900 True 5267 TUCP 0.41 3 32703748 32720876
XM_039822387.1 False 1234 mRNA 0.47 3 32722822 32731692
XM_039822389.1 False 857 mRNA 0.51 4 32706722 32726905
XM_039822390.1 False 1186 mRNA 0.46 3 32716460 32731692

Neighbor

gene id symbol gene type direction distance location
LOC120572862 NA coding upstream 67360 32630802 ~ 32636388 (+)
LOC120572905 NA coding upstream 151883 32548923 ~ 32551865 (+)
LOC120572925 NA coding upstream 209952 32490479 ~ 32493796 (+)
LOC120572915 NA coding upstream 246060 32455473 ~ 32457688 (+)
LOC120572918 NA coding upstream 273134 32427864 ~ 32430614 (+)
LOC120572912 NA coding downstream 18252 32749944 ~ 32754184 (+)
LOC120572871 NA coding downstream 25799 32757491 ~ 32766024 (+)
LOC120572906 NA coding downstream 82090 32813782 ~ 32820213 (+)
LOC120572608 NA coding downstream 97545 32829237 ~ 32832895 (+)
LOC120572609 NA coding downstream 116388 32848080 ~ 32871721 (+)
G148093 NA non-coding upstream 15920 32686804 ~ 32687828 (+)
G148092 NA non-coding upstream 21462 32681104 ~ 32682286 (+)
G148049 NA non-coding upstream 54934 32433816 ~ 32648814 (+)
G148080 NA non-coding upstream 75309 32625255 ~ 32628439 (+)
G148060 NA non-coding upstream 108208 32501427 ~ 32595540 (+)
G147878 NA non-coding downstream 38993 32770685 ~ 32775039 (+)
LOC120573029 NA non-coding downstream 45678 32777370 ~ 32778036 (+)
G148110 NA non-coding downstream 74179 32805871 ~ 32807099 (+)
G148113 NA non-coding downstream 85453 32817145 ~ 32818859 (+)
G147896 NA non-coding downstream 88946 32820638 ~ 32821577 (+)
G148079 NA other upstream 5431 32622894 ~ 32698317 (+)
LOC120572744 NA other upstream 359480 31949319 ~ 32344268 (+)
G147982 NA other upstream 858996 31702869 ~ 31844752 (+)
LOC120572933 NA other upstream 1215761 31479193 ~ 31487987 (+)
G147831 NA other upstream 1476620 31226709 ~ 31227128 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 147930 32879622 ~ 32953496 (+)
G148151 NA other downstream 507407 33239099 ~ 33285193 (+)
LOC120572929 NA other downstream 905744 33637436 ~ 33663228 (+)
LOC120573051 NA other downstream 996679 33728371 ~ 33867882 (+)
G148671 NA other downstream 1144231 33875923 ~ 33884899 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000047_05339574_05340802 NA coding CI01000047 null 5337685 ~ 5340872 (+)