LOC120572933


Basic Information

Item Value
gene id LOC120572933
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31479193 ~ 31487987 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822463.1
ATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGtTGTGATGGAGGTACCAGTGCGCCTTGGAGATGATGTCATTCTACCATGTCAGGCTGCTGATCCCTCCATCTGCCATGTAGAGTGGACCAGAGCTGACCTGAAGCCAGATACCATCCTCTCATACAGAGTTGAAGGGTCGGTTCTAACCATCCTGCATCCTAAATATAAGGAGGACAAGGTGGAGCTGGTGGAAAAAGATCTGAAGAAAGGAAACATGTCCTTAGTTCTGAAGAATGTTAGCACCACTGACCAAGGAACATACAAGTGTCGAGTAACATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGacaagagTGTAGAAAATAATGAAACCGATGATCAAGGAAGTACACAGTGATCCGTCTGCAGGTTACAGATCCAGCAGGTCCCCTGAGGATAGAAACTCCTCTCCTGTAGTCTGATACGGAGGACTGGCAGCAGGTTTTCCAGTTGGACAGATTATTGTAGTTGTTGCAGTGGATGTTTTCCTGATATATAAAAGACGTAAGAAGAAGAGATCAGGACTGCCTGCAGATGATGCTGATAAAGCTTTTTTCCGCCATGAATCTCCACCTTACTGTGGTTGGGGGTTGTGTACCCGAGGAGTCTGGGATCTGTATCACCTGGAGCTCTGAGATCCTGTAGGTTGTCCCATGATGAGTTGGTCTCAGACTCATAGTAAATCAGTTCAAATAAACTTAACCTTTAGAGAAGTAAATGTTTTactactgaagtaaaagtaatgttgctttaaagaaaaagaaaagtgacgtaacttaaattacttttactttcaatacattttcttcaa
>XM_039822464.1
ATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGtTGTGATGGAGGTACCAGTGCGCCTTGGAGATGATGTCATTCTACCATGTCAGGCTGCTGATCCCTCCATCTGCCATGTAGAGTGGACCAGAGCTGACCTGAAGCCAGATACCATCCTCTCATACAGAGTTGAAGGGTCGGTTCTAACCATCCTGCATCCTAAATATAAGGAGGACAAGGTGGAGCTGGTGGAAAAAGATCTGAAGAAAGGAAACATGTCCTTAGTTCTGAAGAATGTTAGCACCACTGACCAAGGAACATACAAGTGTCGAGTAACATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGGTCCCCTGAGGATAGAAACTCCTCTCCTGTAGTCTGATACGGAGGACTGGCAGCAGGTTTTCCAGTTGGACAGATTATTGTAGTTGTTGCAGTGGATGTTTTCCTGATATATAAAAGACGTAAGAAGAAGAGATCAGGACTGCCTGCAGATGATGCTGATAAAGCTTTTTTCCGCCATGAATCTCCACCTTACTGTGGTTGGGGGTTGTGTACCCGAGGAGTCTGGGATCTGTATCACCTGGAGCTCTGAGATCCTGTAGGTTGTCCCATGATGAGTTGGTCTCAGACTCATAGTAAATCAGTTCAAATAAACTTAACCTTTAGAGAAGTAAATGTTTTactactgaagtaaaagtaatgttgctttaaagaaaaagaaaagtgacgtaacttaaattacttttactttcaatacattttcttcaa
>XR_005641511.1
ATCACATTCATCCGTCCGCAGGTTAGAGAGCCAGCAGtTGTGATGGAGGTACCAGTGCGCCTTGGAGATGATGTCATTCTACCATGTCAGGCTGCTGATCCCTCCATCTGCCATGTAGAGTGGACCAGAGCTGACCTGAAGCCAGATACCATCCTCTCATACAGAGTTGAAGGGTCGGTTCTAACCATCCTGCATCCTAAATATAAGGAGGACAAGGTGGAGCTGGTGGAAAAAGATCTGAAGAAAGGAAACATGTCCTTAGTTCTGAAGAATGTTAGCACCACTGACCAAGGAACATACAAGTGTCGAGTAACATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGacaagagTGTAGAAAATAATGAAACCGATGATCAAGGAAGTACACAGTGATCCGTCTGCAGGTTACAGATCCAGCAGGTCCCCTGAGGATAGAAACTCCTCTCCTGTAGTCTGATACGGAGGACTGGCAGCAGGTTTTCCAGTTGGACAGATTATTGTAGTTGTTGCAGTGGATGTTTTCCTGATATATAAAAGACGTAAGAAGAAGAGATCAGGACTGCCTGCAGATGATGCTGATAAAGCTTTTTTCCGCCATGAATCTCCACCTTACTGTGGTTGGGGGTTGTGTACCCGAGGAGTCTGGGATCTGTATCACCTGGAGCTCTGAGATCCTGTAGGTTGTCCCATGATGAGTTGGTCTCAGACTCATAGTAAATCAGTTCAAATAAACTTAACCTTTAGAGAAGTAAATGTTTTactactgaagtaaaagtaatgttgctttaaagaaaaagaaaagtgacgtaacttaaattacttttactttcaatacattttcttcaa
>XR_005641512.1
ATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGtTGTGATGGAGGTACCAGTGCGCCTTGGAGATGATGTCATTCTACCATGTCAGGCTGCTGATCCCTCCATCTGCCATGTAGAGTGGACCAGAGCTGACCTGAAGCCAGATACCATCCTCTCATACAGAGTTGAAGGGTCGGTTCTAACCATCCTGCATCCTAAATATAAGGAGGACAAGGTGGAGCTGGTGGAAAAAGATCTGAAGAAAGGAAACATGTCCTTAGTTCTGAAGAATGTTAGCACCACTGACCAAGGAACATACAAGTGTCGAGTAACATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGagTGTAGAAAATAATGAAACCGATGATCAAGGAAGTACACAGTGATCCGTCTGCAGGTTACAGATCCAGCAGGTCCCCTGAGGATAGAAACTCCTCTCCTGTAGTCTGATACGGAGGACTGGCAGCAGGTTTTCCAGTTGGACAGATTATTGTAGTTGTTGCAGTGGATGTTTTCCTGATATATAAAAGACGTAAGAAGAAGAGATCAGGACTGCCTGCAGATGATGCTGATAAAGCTTTTTTCCGCCATGAATCTCCACCTTACTGTGGTTGGGGGTTGTGTACCCGAGGAGTCTGGGATCTGTATCACCTGGAGCTCTGAGATCCTGTAGGTTGTCCCATGATGAGTTGGTCTCAGACTCATAGTAAATCAGTTCAAATAAACTTAACCTTTAGAGAAGTAAATGTTTTactactgaagtaaaagtaatgttgctttaaagaaaaagaaaagtgacgtaacttaaattacttttactttcaatacattttcttcaa
>XR_005641513.1
ATCAGGTGGTTCAATGAGGACTAATACTACCGTCCTCCCCTggaaaacaatcacaatcatccGTCTGCAGGTTACAGAGCCAGCAGacaagagTGTAGAAAATAATGAAACCGATGATCAAGGAAGTACACAGTGATCCGTCTGCAGGTTACAGATCCAGCAGGTCCCCTGAGGATAGAAACTCCTCTCCTGTAGTCTGATACGGAGGACTGGCAGCAGGTTTTCCAGTTGGACAGATTATTGTAGTTGTTGCAGTGGATGTTTTCCTGATATATAAAAGACGTAAGAAGAAGAGATCAGGACTGCCTGCAGATGATGCTGATAAAGCTTTTTTCCGCCATGAATCTCCACCTTACTGTGGTTGGGGGTTGTGTACCCGAGGAGTCTGGGATCTGTATCACCTGGAGCTCTGAGATCCTGTAGGTTGTCCCATGATGAGTTGGTCTCAGACTCATAGTAAATCAGTTCAAATAAACTTAACCTTTAGAGAAGTAAATGTTTTactactgaagtaaaagtaatgttgctttaaagaaaaagaaaagtgacgtaacttaaattacttttactttcaatacattttcttcaa
>XR_005641514.1
GGAAAACAATCACATTCATCCGTCCGCAGGTTAGAGAGCCAGCAGtTGTGATGGAGGTACCAGTGCGCCTTGGAGATGATGTCATTCTACCATGTCAGGCTGCTGATCCCTCCATCTGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822463.1 True 952 mRNA 0.44 4 31480688 31487987
XM_039822464.1 False 875 mRNA 0.44 3 31480688 31487987
XR_005641511.1 False 903 transcript 0.44 4 31479201 31487987
XR_005641512.1 False 947 transcript 0.44 4 31480688 31487987
XR_005641513.1 False 589 transcript 0.42 3 31480688 31487987
XR_005641514.1 False 121 transcript 0.52 2 31479193 31480480

Neighbor

gene id symbol gene type direction distance location
LOC120572828 NA coding upstream 299509 31129731 ~ 31179684 (+)
LOC120572830 NA coding upstream 371915 31062000 ~ 31107278 (+)
LOC120572604 NA coding upstream 409225 31065627 ~ 31069968 (+)
LOC120572758 NA coding upstream 449001 31016790 ~ 31030192 (+)
LOC120572756 NA coding upstream 463485 31004441 ~ 31015708 (+)
LOC120572782 NA coding downstream 36263 31524250 ~ 31538893 (+)
LOC120572858 NA coding downstream 215075 31703062 ~ 31717353 (+)
LOC120572865 NA coding downstream 279967 31767954 ~ 31790030 (+)
LOC120572911 NA coding downstream 497909 31985896 ~ 31989525 (+)
LOC120572827 NA coding downstream 510274 31998261 ~ 32046440 (+)
G147932 NA non-coding upstream 10907 31435850 ~ 31468286 (+)
G147919 NA non-coding upstream 78060 31395435 ~ 31401133 (+)
LOC120573004 NA non-coding upstream 129084 31340488 ~ 31350109 (+)
G147872 NA non-coding upstream 155912 31320652 ~ 31323281 (+)
G147870 NA non-coding upstream 169872 31308986 ~ 31309321 (+)
G147963 NA non-coding downstream 92145 31580132 ~ 31737438 (+)
G147968 NA non-coding downstream 112571 31600558 ~ 31604328 (+)
LOC120573016 NA non-coding downstream 199074 31687061 ~ 31688389 (+)
LOC120573052 NA non-coding downstream 277488 31765475 ~ 31767761 (+)
LOC120573014 NA non-coding downstream 349186 31837173 ~ 31872085 (+)
G147831 NA other upstream 252065 31226709 ~ 31227128 (+)
LOC120572908 NA other upstream 337532 31115360 ~ 31141661 (+)
LOC120572605 NA other upstream 381467 31084610 ~ 31097726 (+)
G147518 NA other upstream 606305 30870784 ~ 30872888 (+)
LOC120572899 NA other upstream 710856 30734847 ~ 30768337 (+)
G147982 NA other downstream 214882 31702869 ~ 31844752 (+)
LOC120572744 NA other downstream 461332 31949319 ~ 32344268 (+)
G148079 NA other downstream 1134907 32622894 ~ 32698317 (+)
LOC120572879 NA other downstream 1215761 32703748 ~ 32731692 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 1391635 32879622 ~ 32953496 (+)

Expression


Co-expression Network