LOC120573014


Basic Information

Item Value
gene id LOC120573014
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31837173 ~ 31872085 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200020
GAAGTAGAAGCTGAGAAGGTGACATCACATACAGTGATGTCACAATATTACGTAACCTGaaacagccaatcagacggAGCAGAGAGAGTGATCCTGCTGTGAGAACAGAAGACGTCTGTTACGGACAAATAGtgatcaaagacaagaaatcaAAAAGGAAGAGAGAGAGTGATTCTGCTGTGAGAACAGAAGACGTCTGTTACGGACAAATAGTGATCAAagacaagaagaaaaacagGAAGAAAGAGAGTGATCCTGCTGCAATCTACTCC
>XR_005641588.1
CCTGCTGCAATCTACTCTGGAGTGAGAAGAGAAGACGCCTGTAACGGACAAATAGtgatcaaagacaagaaatcaAACAGGAAGAAAGAGAGTGATCCTGCTGCAATCTACTCCAGAGTGAGAACAACAGATGTCAGTTACGGATAAATAGCGATCAAAGAGAAGAAGACAAAAGGAAGAGAGAGTCTCCAGCAGATCCAGAGGAACC

Function

GO: NA

KEGG:

id description
ko04664 Fc epsilon RI signaling pathway
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU200020 True 272 lncRNA 0.42 4 31837173 31861532
XR_005641588.1 False 208 lncRNA 0.44 3 31859851 31872085

Neighbor

gene id symbol gene type direction distance location
LOC120572865 NA coding upstream 47143 31767954 ~ 31790030 (+)
LOC120572858 NA coding upstream 119820 31703062 ~ 31717353 (+)
LOC120572782 NA coding upstream 298280 31524250 ~ 31538893 (+)
LOC120572828 NA coding upstream 657489 31129731 ~ 31179684 (+)
LOC120572830 NA coding upstream 729895 31062000 ~ 31107278 (+)
LOC120572911 NA coding downstream 113811 31985896 ~ 31989525 (+)
LOC120572827 NA coding downstream 126176 31998261 ~ 32046440 (+)
LOC120572761 LOC107694208 coding downstream 178698 32050783 ~ 32055436 (+)
LOC120572878 NA coding downstream 524782 32396867 ~ 32401325 (+)
LOC120572918 NA coding downstream 555779 32427864 ~ 32430614 (+)
LOC120573052 NA non-coding upstream 69412 31765475 ~ 31767761 (+)
G147963 NA non-coding upstream 99735 31580132 ~ 31737438 (+)
LOC120573016 NA non-coding upstream 148784 31687061 ~ 31688389 (+)
G147968 NA non-coding upstream 232845 31600558 ~ 31604328 (+)
G147932 NA non-coding upstream 368887 31435850 ~ 31468286 (+)
G148005 NA non-coding downstream 60090 31932175 ~ 31948837 (+)
G148007 NA non-coding downstream 81938 31954023 ~ 32357834 (+)
G148008 NA non-coding downstream 82719 31954804 ~ 32347376 (+)
G148010 NA non-coding downstream 126133 31998218 ~ 32036483 (+)
LOC120572978 LOC102290724 non-coding downstream 138067 32010152 ~ 32011036 (+)
LOC120572933 NA other upstream 349186 31479193 ~ 31487987 (+)
G147831 NA other upstream 610045 31226709 ~ 31227128 (+)
LOC120572908 NA other upstream 695512 31115360 ~ 31141661 (+)
LOC120572605 NA other upstream 739447 31084610 ~ 31097726 (+)
G147518 NA other upstream 964285 30870784 ~ 30872888 (+)
LOC120572744 NA other downstream 77234 31949319 ~ 32344268 (+)
G148079 NA other downstream 750809 32622894 ~ 32698317 (+)
LOC120572879 NA other downstream 831663 32703748 ~ 32731692 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 1007537 32879622 ~ 32953496 (+)
G148151 NA other downstream 1367014 33239099 ~ 33285193 (+)

Expression


Co-expression Network