G148010


Basic Information

Item Value
gene id G148010
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31998218 ~ 32036483 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200060
cctgtttggtgttATGTATTCCCGTATTCCTCCTGTCTCCTTCCACGCTTCGGACTGCCGCTTTCATATCATAAATAATGGAAAAATATCGCTCAGACCTTGTCCCCTGTACCCTGGAGGACTTGTGGTGCAGATGATAAGtaTGCGTTTTATGTGGCGATGGAGGCACAGTGTGAATTCAGAAAGCAATGAGCTGCCGTTACTCCGTGGGGAGGTGATGAAGCCTGCTGTTCTCCAAATGGACCCTGCAAATTAGATAAATGCACTTCAGGACATCCTAGAAGAACAACTGGATGAGCACCAAGACGACATGGAAACATTCTTCAAACTTTGTGTTGTTGAACAACACTTAAAAATCAATGCCATGTTCCTCGAAGAGTGATATAATACGATCCGTACCTGAGATCCagacctggggcctgtttcacaaaaccaagataaagGATTAAAccaggatttcccagttatcctggatgaatttagccttgattcggtttcacgaaagcgcaGGCACATAAATCTTCATGGAGAttgtttctagattttagaatccaatttcttcagtgtctttattttctacgTCCATATATACAAGGGAGCGAGGCATTTAATAAGTAGAGAAGGAAACTTGTCctctataaaaaattaaaaaaaaaacgcgaaTGAATAGTAGTAGAATAATAGTGAATAattgtctaaaaatatacatttatgaactactgctcttaactgaaaccattcaatgagtcactgtcatttgcaaaaacgaacagttgtacactttgcattaaaagcgagcagtggaagttaatatgacttaggaaatttatattttagcccatcagagagagggaggaacagagtgaaagagatatttacacatcatattctagcgaaaattgatcttcatggtaaatttcctgagtaacattatcttctgctcacttttaaggcaaagagtacaactgttaatttgggCAAATGATTATaactgcttacttttaaggcaaagagtacaactttaaatttgtgcaaatgattataATCATTGCatgtcatcatacttccacaagaagctgctgctcactctgtataaagtatgaacaatgcgtattctccattttggcatcaggaAATCTGTGATCGGCCTCGCGGTCTGttgaggaaagccgtgaatgcacatctatctgaattacttcagcctgactcaacctagtctctcctcctcagctcctagtctctcctcctcagctcctagtctctcctcctcagcctggcttggccttcgtgaaacgcaccaagccaggatgcacagattagactaggtcaagcctcgctttatcagttatccttgatttatattctgcttttgtgaaacaggccccagtaCATGATTGTTTTAGTTCTTATTgt
>TU200062
GTTTTCTTATGTATGTGAGAGAATGACTGTCCCAGGGTTGTAAAGGTAACATCTaccttaaccctcctgttatcctCAAATGTACTAACATCTGTTATCAAGGATAACAGGAGGATTAATTAGCTCAGGCCCCACCCACCCAGCACGCTAGGTGacacaaatcaaacacacaTGCTGCCATGTTACTTCACCAACAGGTGCATGCTGGTTGtggctaacatgctaaatgctaacatgctgatggatGACCCTCCACTTCACGTTCAGACAGCTTCGTTGGGCTGTGTCAAGTTGATAGCCGCTGTCATTTCTGCTGACCACCAGATGTCACCGTGTTGTCTTCGATGCTTTGATGCTTCGGATCATTTTGCGATACAATCAGGAAGAAGCTTCAGAGGCTTCACAAGGCTTCGTTCGCCCATCActacgAAATATCGCTCAGACCTTGTCCCCTGTACCCTGGAGGACTTGTGGTGCAGATGATAAGtaTGCGTTTTATGTGGCGATGGAGGCACAGTGTGAATTCAGAAAGCAATGAGCTGCCGTTACTCCGTGGGGAGGTGATGAAGCCTGCTGTTCTCCAAATGGACCCTGCAAATTAGATAAATGCACTTCAGGACATCCTAGAAGAACAACTGGATGAGCACCAAGACGACATGGAAACATTCTTCAAACTTTGTGTTGTTGAACAACACTTAAAAATCAATGCCATGTTCCTCGAAGAGTGATATAATACGATCCGTACCTGAGATCCagacctggggcctgtttcacaaaaccaagataaagGATTAAAccaggatttcccagttatcctggatgaatttagccttgattcggtttcacgaaagcgcaGGCACATAAATCTTCATGGAGAttgtttctagattttagaatccaatttcttcagtgtctttattttctacgTCCATATATACAAGGGAGCGAGGCATTTAATAAGTAGAGAAGGAAACTTGTCctctataaaaaattaaaaaaaaaacgcgaaTGAATAGTAGTAGAATAATAGTGAATAattgtctaaaaatatacatttatgaactactgctcttaactgaaaccattcaatgagtcactgtcatttgcaaaaacgaacagttgtacactttgcattaaaagcgagcagtggaagttaatatgacttaggaaatttatattttagcccatcagagagagggaggaacagagtgaaagagatatttacacatcatattctagcgaaaattgatcttcatggtaaatttcctgagtaacattatcttctgctcacttttaaggcaaagagtacaactgttaatttgggCAAATGATTATaactgcttacttttaaggcaaagagtacaactttaaatttgtgcaaatgattataATCATTGCatgtcatcatacttccacaagaagctgctgctcactctgtataaagtatgaacaatgcgtattctccattttggcatcaggaAATCTGTGATCGGCCTCGCGGTCTGttgaggaaagccgtgaatgcacatctatctgaattacttcagcctgactcaacctagtctctcctcctcagctcctagtctctcctcctcagctcctagtctctcctcctcagcctggcttggccttcgtgaaacgcaccaagccaggatgcacagattagactaggtcaagcctcgctttatcagttatccttgatttatattctgcttttgtgaaacaggccccagtaCATGATTGTTTTAGTTCTTATTgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200060 False 1413 lncRNA 0.40 3 32030772 32036483
TU200062 True 1759 lncRNA 0.41 4 31998218 32036483

Neighbor

gene id symbol gene type direction distance location
LOC120572911 NA coding upstream 8693 31985896 ~ 31989525 (+)
LOC120572865 NA coding upstream 208188 31767954 ~ 31790030 (+)
LOC120572858 NA coding upstream 280865 31703062 ~ 31717353 (+)
LOC120572782 NA coding upstream 459325 31524250 ~ 31538893 (+)
LOC120572828 NA coding upstream 818534 31129731 ~ 31179684 (+)
LOC120572761 LOC107694208 coding downstream 14300 32050783 ~ 32055436 (+)
LOC120572878 NA coding downstream 360384 32396867 ~ 32401325 (+)
LOC120572918 NA coding downstream 391381 32427864 ~ 32430614 (+)
LOC120572915 NA coding downstream 418990 32455473 ~ 32457688 (+)
LOC120572925 NA coding downstream 453996 32490479 ~ 32493796 (+)
G148005 NA non-coding upstream 49381 31932175 ~ 31948837 (+)
LOC120573014 NA non-coding upstream 126133 31837173 ~ 31872085 (+)
LOC120573052 NA non-coding upstream 230457 31765475 ~ 31767761 (+)
LOC120573016 NA non-coding upstream 309829 31687061 ~ 31688389 (+)
G147968 NA non-coding upstream 393890 31600558 ~ 31604328 (+)
G148011 NA non-coding downstream 70136 32106619 ~ 32107539 (+)
LOC120573042 NA non-coding downstream 114370 32150853 ~ 32151637 (+)
G148020 NA non-coding downstream 117287 32153770 ~ 32154708 (+)
LOC120573036 NA non-coding downstream 157629 32194112 ~ 32195902 (+)
LOC120572985 NA non-coding downstream 166821 32203304 ~ 32205138 (+)
G147982 NA other upstream 153466 31702869 ~ 31844752 (+)
LOC120572933 NA other upstream 510231 31479193 ~ 31487987 (+)
G147831 NA other upstream 771090 31226709 ~ 31227128 (+)
LOC120572908 NA other upstream 856557 31115360 ~ 31141661 (+)
LOC120572605 NA other upstream 900492 31084610 ~ 31097726 (+)
G148079 NA other downstream 586411 32622894 ~ 32698317 (+)
LOC120572879 NA other downstream 667265 32703748 ~ 32731692 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 843139 32879622 ~ 32953496 (+)
G148151 NA other downstream 1202616 33239099 ~ 33285193 (+)
LOC120572929 NA other downstream 1600953 33637436 ~ 33663228 (+)

Expression


Co-expression Network