LOC120573036


Basic Information

Item Value
gene id LOC120573036
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32194112 ~ 32195902 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200074
GTACGGATTAGGTACTGACAGCCGGACTTGGGAATTAGAGTCCGAGAGTTAGAGCAAAAACTTCCGAAATATGggaatatttcaggccaactggtaaaagagttgtctgtacactctgtcaaacttcacttggaaacacacaggagttgttcaagacgttttggttttttttctctcctccatatcacctccggggctccaaACGTTCAAGCtcacagaaaaggaaaagacaacAAAGCAGTCCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGAAACAgagcaaggactaacctTGCCTCATAGGCCGTGACCTATATTTGCTCTGAGCTGTCTGCAAGTCCAGATACATTACGCTGATAATTAacgc
>XR_005641610.1
CCGCCGTCTTCACAACTCTGAGACAAACTGTAGCAGGCGCTATGAAACAgagcaaggactaacctTGCCTCATAGGCCGTGACCTATATTTGCTCTGAGCTGTCTGCAAGTCCAGATACATTACGCTGATAATTAacgccattgtgtctgcctgtaagacatattaCCAGACAGCACGCAGGAACAGGTAGAAACAACAAGATGTTGCAtcgcgggcagaagctgtgaagagttcagctcggagtcggtcgtgaagaaaagaggctgctggaagcgagacagagtgtgctggctgcgggtgaggtggacatttggaaGTGCCCCACCTAGACATACAGGACAACACATCACAGACGTCTGCAAAATAGACCGAATTCAGACCAAATGCTGCTGGTTACCTACAGCTCCGAGGCGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200074 False 381 lncRNA 0.45 3 32194112 32195409
XR_005641610.1 True 418 lncRNA 0.51 4 32194616 32195902

Neighbor

gene id symbol gene type direction distance location
LOC120572761 LOC107694208 coding upstream 138676 32050783 ~ 32055436 (+)
LOC120572827 NA coding upstream 147672 31998261 ~ 32046440 (+)
LOC120572911 NA coding upstream 204587 31985896 ~ 31989525 (+)
LOC120572865 NA coding upstream 404082 31767954 ~ 31790030 (+)
LOC120572858 NA coding upstream 476759 31703062 ~ 31717353 (+)
LOC120572878 NA coding downstream 200965 32396867 ~ 32401325 (+)
LOC120572918 NA coding downstream 231962 32427864 ~ 32430614 (+)
LOC120572915 NA coding downstream 259571 32455473 ~ 32457688 (+)
LOC120572925 NA coding downstream 294577 32490479 ~ 32493796 (+)
LOC120572905 NA coding downstream 353021 32548923 ~ 32551865 (+)
G148020 NA non-coding upstream 39404 32153770 ~ 32154708 (+)
LOC120573042 NA non-coding upstream 42475 32150853 ~ 32151637 (+)
G148011 NA non-coding upstream 86573 32106619 ~ 32107539 (+)
G148010 NA non-coding upstream 157629 31998218 ~ 32036483 (+)
LOC120572969 NA non-coding upstream 158359 32030624 ~ 32035753 (+)
LOC120572985 NA non-coding downstream 7402 32203304 ~ 32205138 (+)
LOC120572971 NA non-coding downstream 10720 32206622 ~ 32207636 (+)
G148028 NA non-coding downstream 127531 32323433 ~ 32323850 (+)
G148030 NA non-coding downstream 141207 32337109 ~ 32339975 (+)
G148029 NA non-coding downstream 141395 32337297 ~ 32340296 (+)
G147982 NA other upstream 349360 31702869 ~ 31844752 (+)
LOC120572933 NA other upstream 706125 31479193 ~ 31487987 (+)
G147831 NA other upstream 966984 31226709 ~ 31227128 (+)
LOC120572908 NA other upstream 1052451 31115360 ~ 31141661 (+)
LOC120572605 NA other upstream 1096386 31084610 ~ 31097726 (+)
G148079 NA other downstream 426992 32622894 ~ 32698317 (+)
LOC120572879 NA other downstream 507846 32703748 ~ 32731692 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 683720 32879622 ~ 32953496 (+)
G148151 NA other downstream 1043197 33239099 ~ 33285193 (+)
LOC120572929 NA other downstream 1441534 33637436 ~ 33663228 (+)

Expression


Co-expression Network