LOC120572971


Basic Information

Item Value
gene id LOC120572971
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32206622 ~ 32207636 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641541.1
GTCTGAATTTGTAATTTACTGTTAGCTCTGACATGGGATTTCAATATGACTCAGTAGTTTTTACTATATTGTTTAATCCAAGGGATGTCTAAGAACATCGACAAACTTGCCAAGGAAAAGGATTGGCAGGTGGTAAAAAGTGGCAACAGAGTATTAGGAACCATCTCTACTGGACTGCATCATCATCCAAGACAGGCCCAGAGAAGGTGGCAAAGTGGACATCTGTCATCAATCACAtccacaacatacacacacatgaagaCCCCCTTTTTCCAAAGTGTGAGCACAGTGATGTCATAGATAAGAGGAGGTGGTTGAAGCCAGGATCAAAGGCTTCCTACAGACTGGAGAAGGTCCTTACAAACAAGAGGTTCATCAAGGGTGTGGAGAAGCTAAGCCCTCACCACCAAACATCCTCTCTTGAGGCCTTCCACAGCGTTGTCATCCGCTTTGCACCAAAGAGTGTGGTGTACCCATTCATTGGGATGCTTTGCAGactCTATCTCTCAGCATTCCACTTCAATGAGAATGCCAACCGGCCACAGTCAACAAGTGCTCTGGGAGATCCTGCCTTTAAACTGGCCTTCCCTAAAGCCAAGAAAGGGGGATACAGCCTCAAACGACGGAAAACTGAGCCGACATTCTGTAAGTAAATTATCACAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641541.1 True 667 lncRNA 0.45 3 32206622 32207636

Neighbor

gene id symbol gene type direction distance location
LOC120572761 LOC107694208 coding upstream 151186 32050783 ~ 32055436 (+)
LOC120572827 NA coding upstream 160182 31998261 ~ 32046440 (+)
LOC120572911 NA coding upstream 217097 31985896 ~ 31989525 (+)
LOC120572865 NA coding upstream 416592 31767954 ~ 31790030 (+)
LOC120572858 NA coding upstream 489269 31703062 ~ 31717353 (+)
LOC120572878 NA coding downstream 189231 32396867 ~ 32401325 (+)
LOC120572918 NA coding downstream 220228 32427864 ~ 32430614 (+)
LOC120572915 NA coding downstream 247837 32455473 ~ 32457688 (+)
LOC120572925 NA coding downstream 282843 32490479 ~ 32493796 (+)
LOC120572905 NA coding downstream 341287 32548923 ~ 32551865 (+)
LOC120572985 NA non-coding upstream 1484 32203304 ~ 32205138 (+)
LOC120573036 NA non-coding upstream 10720 32194112 ~ 32195902 (+)
G148020 NA non-coding upstream 51914 32153770 ~ 32154708 (+)
LOC120573042 NA non-coding upstream 54985 32150853 ~ 32151637 (+)
G148011 NA non-coding upstream 99083 32106619 ~ 32107539 (+)
G148028 NA non-coding downstream 115797 32323433 ~ 32323850 (+)
G148030 NA non-coding downstream 129473 32337109 ~ 32339975 (+)
G148029 NA non-coding downstream 129661 32337297 ~ 32340296 (+)
G148031 NA non-coding downstream 130432 32338068 ~ 32341878 (+)
LOC120572970 NA non-coding downstream 151225 32358861 ~ 32362237 (+)
G147982 NA other upstream 361870 31702869 ~ 31844752 (+)
LOC120572933 NA other upstream 718635 31479193 ~ 31487987 (+)
G147831 NA other upstream 979494 31226709 ~ 31227128 (+)
LOC120572908 NA other upstream 1064961 31115360 ~ 31141661 (+)
LOC120572605 NA other upstream 1108896 31084610 ~ 31097726 (+)
G148079 NA other downstream 415258 32622894 ~ 32698317 (+)
LOC120572879 NA other downstream 496112 32703748 ~ 32731692 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 671986 32879622 ~ 32953496 (+)
G148151 NA other downstream 1031463 33239099 ~ 33285193 (+)
LOC120572929 NA other downstream 1429800 33637436 ~ 33663228 (+)

Expression


Co-expression Network