LOC120572906


Basic Information

Item Value
gene id LOC120572906
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32813782 ~ 32820213 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822424.1
TCACATGCACGGATGTCTTCATTCATAGCCAGCGTGGAAACAGGCAGACCGACGTTAGTGGATCAGAGTTCGGCTGTAACACGGAGGATTCCCCCCCAGTATGGATCTAATCTCTGCGGATTATAATGTCGACAACGACGGACAGAGGGATCCGGGAATCGCGCTTGTTGACGGGGGAAAGCTCCGCGGCTCCTCCGGCAGCAACAAGCAGGAAGAAGGGACACCATGAGAGGGTTTAGGTCGGAGGAGGATTGGCTAGGGCTCAAAGTGAGCTGAAACTTGACGTGCCATGGGGAACTCCCTTCTTCGTCTTGAAAACTACAACAGCTGTTTTCAGGTTTCAGCATGATTGAACAAGTTTGAACATGTTGTCTTCCACTCTCCTGTGTTTCCTGCTCTTCCTGCCACTCTCTGAAGCCCTAAAGGGAACAAGGATTACTTCCAAACTAATCCTGTTAACGGTGAAGCCCGAGCAGGATGTTACTCTCGAGTGTCGGGCTCTCTCAGACGGCGCCGTCACTCTGCTGCAGTGGAACAGACGCGACCTGAAGGACAGCGACTACGTCTTCTTCTACAGAAACCGGCAAGCTTATGAGAGGTACCAGCACCCGCGTTACCGGGGCCGGGTGGAGCTGAGAGACCCGGAGATGAGGAACGGAGACGTCTCCGTTGTTTTGAAGAACGTCAGCGTCACCGACACCGGGACGTACAACTGCAGAGTCATAACAACTGTTGGCAACGAGACGAAGCGCTTGGAGAGCAGGCAGCTCATCAACCTGACCGTCACCGACTCCGATCCCACATCTGGACAGGAGGTTGAACATCCTGGACACATGGTCGGTGTGTCAGTTGCTGTAGGCCTTCTTGTTATTgttcttctttcttctgttcTGTGTTTTATCATGTATAAACGGCGTACGGTCCCAGAGAGAATCCTTCATACAAATGAATCCGGCTGATAAAAACACCAAGGTGATCTGAGTGTCTGAGTCCTCCTGCTGAAGGAATCAACGGTCTAGAAACGACAAATCTGTTTTGATAAGAGTTAAGCTTGTCGAAGTCATACGCAGCCGTTAGCACGCTCATATCAGCGTTTTTGATTTTCATAATATCGCATTGCACCTTTTGACATTCAAATCTTCAGCAAATAAAAACCGAAATATATTCTATGATCTGTTACTAAAGCTTGTTAGCTTGTTAAGCTTGTTTCACTCACAAAGATGTAAATTGTAATGTTGATCATACAGCTAATTGAATGTATGGATGTGTCATATCTCTGTATGACTTCTTTAGGTTTCACTTTCTGCACTTTAATGTTTCTATGTTCTCATGTTGCACAGCACTTTATTTCACCTCTTGAGTTTTATTCAGTTAATAAATAAGTTACtattaaaaacgtttttttttttttttttaatgaagtgGTTGTTCTGGATCAATGCTGCCCAATTTGGGGCCTGCGGGTCAAGTTTGACCCGTCATGACATTTGACATTCTTATTCCCCTCTTATTTTCTGTCAACGTGTATAAAACCCTCCACAGAAACCCCTTGTGCTCAGAGATTCCTGTGAGTTTGTGTCTCCCACTGCGCGGAGAATCAAACTTGTCTGAATCAGCCTCTTCATTGGACCTGAGAGAAGTTTTTCTTCCCCAGACTCCGTGTCTGTGAAACAAGGTTAAAGTTTAAGAAGATGATGAGCCGAACACGTGCTGCTGTCTTTAACCTCTGCAAAATGAGAGGAAATGAGTCACAAAGCATTGAGCGTTGTTCATAAACATGCCGAAACGTCTGATGTGGTTTCTGCGGGAGCGTGcccatgttcccacatttctaagaaattgttttcactgaaaattaggccccatgttcccacatttctaaaacCTTTTTCAAagttaggccctatgttcccacatttctaaaacCTTTTTCAAag
>XM_039822425.1
CAGTTTAGACTCAGAGACAGATGTCATCCACAGGGAGCAGATCTGCGTTTtctagGTTTAGGTCGGAGGAGGATTGGCTAGGGCTCAAAGTGAGCTGAAACTTGACGTGCCATGGGGAACTCCCTTCTTCGTCTTGAAAACTACAACAGCTGTTTTCAGGTTTCAGCATGATTGAACAAGTTTGAACATGTTGTCTTCCACTCTCCTGTGTTTCCTGCTCTTCCTGCCACTCTCTGAAGCCCTAAAGGGAACAAGGATTACTTCCAAACTAATCCTGTTAACGGTGAAGCCCGAGCAGGATGTTACTCTCGAGTGTCGGGCTCTCTCAGACGGCGCCGTCACTCTGCTGCAGTGGAACAGACGCGACCTGAAGGACAGCGACTACGTCTTCTTCTACAGAAACCGGCAAGCTTATGAGAGGTACCAGCACCCGCGTTACCGGGGCCGGGTGGAGCTGAGAGACCCGGAGATGAGGAACGGAGACGTCTCCGTTGTTTTGAAGAACGTCAGCGTCACCGACACCGGGACGTACAACTGCAGAGTCATAACAACTGTTGGCAACGAGACGAAGCGCTTGGAGAGCAGGCAGCTCATCAACCTGACCGTCACCGACTCCGATCCCACATCTGGACAGGAGGTTGAACATCCTGGACACATGGTCGGTGTGTCAGTTGCTGTAGGCCTTCTTGTTATTgttcttctttcttctgttcTGTGTTTTATCATGTATAAACGGCGTACGGTCCCAGAGAGAATCCTTCATACAAATGAATCCGGCTGATAAAAACACCAAGGTGATCTGAGTGTCTGAGTCCTCCTGCTGAAGGAATCAACGGTCTAGAAACGACAAATCTGTTTTGATAAGAGTTAAGCTTGTCGAAGTCATACGCAGCCGTTAGCACGCTCATATCAGCGTTTTTGATTTTCATAATATCGCATTGCACCTTTTGACATTCAAATCTTCAGCAAATAAAAACCGAAATATATTCTATGATCTGTTACTAAAGCTTGTTAGCTTGTTAAGCTTGTTTCACTCACAAAGATGTAAATTGTAATGTTGATCATACAGCTAATTGAATGTATGGATGTGTCATATCTCTGTATGACTTCTTTAGGTTTCACTTTCTGCACTTTAATGTTTCTATGTTCTCATGTTGCACAGCACTTTATTTCACCTCTTGAGTTTTATTCAGTTAATAAATAAGTTACtattaaaaacgtttttttttttttttttaatgaagtgGTTGTTCTGGATCAATGCTGCCCAATTTGGGGCCTGCGGGTCAAGTTTGACCCGTCATGACATTTGACATTCTTATTCCCCTCTTATTTTCTGTCAACGTGTATAAAACCCTCCACAGAAACCCCTTGTGCTCAGAGATTCCTGTGAGTTTGTGTCTCCCACTGCGCGGAGAATCAAACTTGTCTGAATCAGCCTCTTCATTGGACCTGAGAGAAGTTTTTCTTCCCCAGACTCCGTGTCTGTGAAACAAGGTTAAAGTTTAAGAAGATGATGAGCCGAACACGTGCTGCTGTCTTTAACCTCTGCAAAATGAGAGGAAATGAGTCACAAAGCATTGAGCGTTGTTCATAAACATGCCGAAACGTCTGATGTGGTTTCTGCGGGAGCGTGcccatgttcccacatttctaagaaattgttttcactgaaaattaggccccatgttcccacatttctaaaacCTTTTTCAAagttaggccctatgttcccacatttctaaaacCTTTTTCAAag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822424.1 True 1937 mRNA 0.46 4 32813782 32820213
XM_039822425.1 False 1759 mRNA 0.44 4 32814716 32820213

Neighbor

gene id symbol gene type direction distance location
LOC120572871 NA coding upstream 47758 32757491 ~ 32766024 (+)
LOC120572912 NA coding upstream 59598 32749944 ~ 32754184 (+)
LOC120572862 NA coding upstream 177394 32630802 ~ 32636388 (+)
LOC120572905 NA coding upstream 261917 32548923 ~ 32551865 (+)
LOC120572925 NA coding upstream 319986 32490479 ~ 32493796 (+)
LOC120572608 NA coding downstream 9024 32829237 ~ 32832895 (+)
LOC120572609 NA coding downstream 27867 32848080 ~ 32871721 (+)
LOC120572784 NA coding downstream 52627 32872840 ~ 32875846 (+)
LOC120572613 LOC102077956,LOC101156122,LOC105419947,LOC107099063,LOC106958974,LOC105922125,LOC103480946,LOC107396735,LOC106536046 coding downstream 402167 33222380 ~ 33240665 (+)
LOC120572615 NA coding downstream 521990 33342203 ~ 33430776 (+)
G148110 NA non-coding upstream 6683 32805871 ~ 32807099 (+)
LOC120573029 NA non-coding upstream 35746 32777370 ~ 32778036 (+)
G147878 NA non-coding upstream 38743 32770685 ~ 32775039 (+)
G148093 NA non-coding upstream 125954 32686804 ~ 32687828 (+)
G148092 NA non-coding upstream 131496 32681104 ~ 32682286 (+)
G147896 NA non-coding downstream 425 32820638 ~ 32821577 (+)
G148114 NA non-coding downstream 2983 32823196 ~ 32823506 (+)
G147891 NA non-coding downstream 9747 32829960 ~ 33010562 (+)
LOC120572972 NA non-coding downstream 24665 32844878 ~ 32847062 (+)
G148117 NA non-coding downstream 44208 32864421 ~ 32865373 (+)
LOC120572879 NA other upstream 82090 32703748 ~ 32731692 (+)
G148079 NA other upstream 115465 32622894 ~ 32698317 (+)
LOC120572744 NA other upstream 469514 31949319 ~ 32344268 (+)
G147982 NA other upstream 969030 31702869 ~ 31844752 (+)
LOC120572933 NA other upstream 1325795 31479193 ~ 31487987 (+)
LOC120572610 kif1c,LOC100706439,LOC101481352 other downstream 59409 32879622 ~ 32953496 (+)
G148151 NA other downstream 418886 33239099 ~ 33285193 (+)
LOC120572929 NA other downstream 817223 33637436 ~ 33663228 (+)
LOC120573051 NA other downstream 908158 33728371 ~ 33867882 (+)
G148671 NA other downstream 1055710 33875923 ~ 33884899 (+)

Expression


Co-expression Network