G148879


Basic Information

Item Value
gene id G148879
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33724665 ~ 33789375 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201327
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctctctctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtttctctctctctgtctctctctgtctctctctctctgtttctctctctgtgtgtctctctctctctgtctctctctgtctctctctctgtctctctgtctctctctgtctctctgtgtctctctctctgtctctctgtctatctctctctctgtctctctctctctctgtctctctgtctctctctctctctcactttctcc
>TU201328
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctgtctctctctctctgtctctctctctgtctctctgtctctctctgtctctctgtgtctctctctctgtctctctgtctatctctctctctgtctctctctctctctgtctctctgtctctctctctctctcactttctcc
>TU201329
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctgtctctctctctctgtctctctctctgtctctctgtctctctctctctctcactttctcc
>TU201330
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctgtctctctctctctgtctgtctctctctctctctctctctctctctctctctctttctgtctctctctctctctctctttctagctctctctctccctctctctctctctctctttctaactctctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtttctctctctctctctctctgtctctctctctctctctctctc
>TU201333
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctgtctctctctctctctctctctctccctctctctctctctctctttctaactctctctctctgtctctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtttctctctctctgtctctctctgtctctctctctctgtttctctctctgtgtgtctctctctctctgtctctctctgtctctctctctgtctctctgtctctctctgtctctctgtgtctctctctctgtctctctgtctatctctctctctgtctctctctctctctgtctctctgtctctctctctctctcactttctcc
>TU201334
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctctctctctctctctctgtctctctctgtctctctctctctctctctgtctctctctgtctctctctctgtctctctgtctctctctgtctctctgtgtctctctctctgtctctctgtctatctctctctctgtctctctctctctctgtctctctgtctctctctctctctcactttctcc
>TU201337
CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtttctctctctctctctctctgtctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201327 False 577 TUCP 0.49 2 33788595 33789375
TU201328 False 321 lncRNA 0.49 3 33788595 33789375
TU201329 False 241 lncRNA 0.49 3 33788595 33789375
TU201330 False 588 TUCP 0.49 3 33724665 33789375
TU201333 True 677 TUCP 0.49 3 33788595 33789375
TU201334 False 475 TUCP 0.49 3 33788595 33789375
TU201337 False 436 lncRNA 0.49 3 33724665 33789375

Neighbor

gene id symbol gene type direction distance location
LOC120572751 LOC103375587,LOC107103475,LOC108251741,LOC102290311 coding downstream 27418 33670442 ~ 33697247 (-)
LOC120572928 NA coding downstream 82623 33637494 ~ 33642042 (-)
LOC120572619 NA coding downstream 99528 33622683 ~ 33625137 (-)
LOC120572617 NA coding downstream 196729 33525259 ~ 33527936 (-)
LOC120572860 LOC106676966 coding downstream 199886 33523111 ~ 33524779 (-)
LOC120572813 NA coding upstream 147715 33937090 ~ 33947911 (-)
LOC120572783 NA coding upstream 163877 33953252 ~ 33988039 (-)
LOC120572834 NA coding upstream 207678 33997053 ~ 34006889 (-)
LOC120572621 NA coding upstream 219391 34008766 ~ 34028312 (-)
LOC120572892 NA coding upstream 502985 34292360 ~ 34293998 (-)
LOC120573021 NA non-coding downstream 4264 33719477 ~ 33720401 (-)
G148866 NA non-coding downstream 50596 33579951 ~ 33674069 (-)
G148864 NA non-coding downstream 61447 33576915 ~ 33663218 (-)
LOC120573011 NA non-coding downstream 97533 33626507 ~ 33627132 (-)
LOC120572977 NA non-coding downstream 98299 33625875 ~ 33626366 (-)
LOC120572957 NA non-coding upstream 18334 33807709 ~ 33822184 (-)
G148892 NA non-coding upstream 120758 33910133 ~ 34080649 (-)
G148909 NA non-coding upstream 126223 33915598 ~ 33916227 (-)
G148913 NA non-coding upstream 138236 33927611 ~ 33929084 (-)
G148915 NA non-coding upstream 159016 33948391 ~ 33948898 (-)
LOC120572843 NA other downstream 226619 33495713 ~ 33498046 (-)
corin nfxl1,corin,LOC102297304 other downstream 383128 33221735 ~ 33341537 (-)
LOC120572612 NA other downstream 591990 33110199 ~ 33132675 (-)
G148509 NA other downstream 762432 32831676 ~ 32962233 (-)
G148536 NA other downstream 778859 32945345 ~ 32945806 (-)
G148918 NA other upstream 231197 34020572 ~ 34021079 (-)
LOC120572826 NA other upstream 256862 34046237 ~ 34201855 (-)
LOC120572812 NA other upstream 293087 34082462 ~ 34176045 (-)
LOC120572901 NA other upstream 561880 34351255 ~ 34353438 (-)
LOC120572624 LOC103360266,LOC104932671,LOC103398742 other upstream 623905 34413280 ~ 34421997 (-)

Expression


Co-expression Network