corin (nfxl1,corin,LOC102297304)


Basic Information

Item Value
gene id corin
gene name nfxl1,corin,LOC102297304
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33221735 ~ 33341537 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200858
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacagacacacacacacacatacacacacacacacacacacacaacagaaacagagacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacagacagagacacaaatacacacacaaacacacacagacacacacagagagacagagacacacacagagacacacacacacacgcacacaaatacacacacacagacagagacacacagacagagacacacacacacacacacagacacacacacacacacacacacagacacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacagacacacacacacacaaagagacacacacagacacacacacagacagacacacacacacacac
>TU200859
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacagacacacacacacacatacacacacacacacacacacacaacagaaacagagacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacacacagacagagacacaaatacacacacaaacacacacagacacacacagagagacagagacacacacagagacacacacacacacgcacacaaatacacacacacagacagagacacacagacagagacacacacacacacacacagacacacacacacacacacacacagacacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacagacacacacacacacaaacacacagagacacagagacacacacacacagacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacatttt
>TU200860
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacacacacacacacacacacacacacacacacacacatacacacacacacacacagacagagacacaaatacacacacaaacacacacacacacacacacacagagacagagacacacacaggacacacacacacacgcacaatacacacacacacagacagatacacacagacagagacacacacacacagacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtcacacagctTCAGTTCCTCTACTGGTGCCTATATCTATCCTGATAGCCTTCAGATGCTAACTGTTGTATTAGCAGGAGAATTAACTACTATTACAGATGCTAACTAGTTAGCTAGTAGAGCTGCAAGCAGACTTCACATTCATTAAACATTCACTTTAAGGGTCATTTTTAACCTTTCTCAACACTATTTCCCAAtgttgtgtctaagtgactgatgggaacacgAAAAATCACCATCCACCACCaagaaatcaccatcaccaaactccaccagactccatgtaaataatcaggacttttagcgtatatagagccagcacatttccacatgtaaatgggtgaattaagtttttttttcaaccaaaccagagtggtgattgttggaaacagtggaaagatgaaccaagacggcttttggtagttttatttagtttctgtccactttgaattaagtgtgtttttaagtttataaaagtagtgattatttacatggagtctggtggagtttggtgttaaacaaaaaggacttCACACAAAGGTTTCATTCTTAGATTATTAGATCATTGTCACATTAATACAAAGTGAACTGAgattattggtgtgtgtgtgtgtgtgtgtgtgtgggatgtaaacacacactttatttccACGGCATCGTCTGCTTCGAGTGTTCATACTTTTAATtatcatgtttaaaaaaaaaaaaatcacaacgtTCAGACGTTCAAGCGCTGAATCTGTAAAAGCTGCTAAAATCTAAAGAGCACTCAACTTCCCACAATGCTTCACTCTATAGTGCCTGTACTTAAACTTAGCCGTGTTAACCTGTAACCATGTCGTACTgtacgtgtgcgtgtgtgtgtacgtgtgcgtgtgtacgtgtgtgtgtgtacatgtgtgtgtgtacatgtgcgtgtgtacatgtgcgtgtgtgtgtgtgtgtgtgtgagagagagactatTACTTTGCTTCTAAACACTCCGGCAACTTATTCGGGCAACTTTGAGGAACAACATTTATCTTAAAGTCCAGTTTCGGACCAAAAGATTGGAGACGAGAATTTGTACAAATTCTCGTCTCCATGGAAACAACTCTCGTCTTAAAATTTGAATGAGGATCTTGATGGAGAGATACGTGCTGCAGCGTCAACTTTTAAATTTTCTGGCTCAAAATATATCTAGTTTTTTTCGTCTTTTTCGCCACTTGTGTCACTTTTCctccaaagttttttttttttacgtttttttgtcacttcttaatgatattttttgggggtttttttcccccacgtttttgaagctaTTTCCTACATTTTTGCCACTCGTTTCAAagttattttatcttttttatttcctcCAAATCCTATATAATTGTAGCCTGacgagccagacccacatccagatgttgagggtctgggaactccccattggtcagggctcaatccgaggggggCGGGatcaacggttgtctttcaaattcccctctgcacgcaataggctGGCGctgcaaccaatcagagcaacgaagaaggtagcggcgctagttgatagattaaactgttGACGTATCCGGTCATCAAacctccgaacacatcttcccttttttaagaatgactccagtgtcgttctttgttcttttctcaaagtaaagctgaactccaaggcttccagaagaccactgttcaccagcagcagcagcagcagccataagccccgcccccaggctctatacacgatgtgattggcctgaccagagtttgggtttttccagctcgcaagccaacggagagtgcctagactgaccctggctgcaaattacatttgctgccactagggtgcgtctagatttctaggctaacaaaaacattgaaaaagcttaaaaagCGTTGACGAAAAAtagctgaaaataaaaaaaaacttgaaaaagtgacaaaaacatcaaagaaaAGACCCAAAAAAatggtggaaaaaaaacattgaagaccgtCAACTGAAGGATAACTTCACttcatgatttataaaaccatgccaacaattattagccAATTTAAAAACTTAGCATGCAATTAAAGCTACGTCCAGAACGCCCACACGTTATCGTAGGCCAAGTTTAATATGCTACTTCATTTacacataatatacagtacagaggccaaaagtttggacacaccttctcattcagtgtgtttctttattttcatgactatttacattgtagattctcactga
>TU200861
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacagacacacacacacacacacacacacacacacacacacacacacacacacagacacacatacacacacacacaa
>TU200862
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacagacacacacacacacacacacacacacacacacacacacacacacacacagacacacagacacacagaaacacacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacatacacacacacacaa
>TU200864
CAGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacaaagacagagacagagacacacacacacacacagaaacagagacacacacacacagacagagacacagacacacacacacacacacacacacacacacacaaacacacacacacacagacacacacacacacacacacacacacacacacacaacacaaagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacagacacacagaaacacacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacatacacacacacacaa
>TU200865
tgtgtgtgtgtgtgtctgtgtgtctcttgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtctgtgtgtgtccagtgtgtaaccTGGCCACTGAGCATCGCTGTGGAGACGGCCGCTGTGTGTCCAGAGACTGGCTGTGTGACGGAGACCACGACTGTCTGGACAAGAGCGACGAGCTCAACTGCTcctgtAAGAGCCAGGGTCTGTTGGAGTGCAGGAACGGCCAGTGTGTCCCGTCAGCGTTTCGTTGTGACGGAGAAGACGACTGTAAAGACGGCAGCGACGAGGAGCACTGCAGCCGAGAGCAGActCAGGGTGTGTGTGCCCCCGGTCAGCCCAGCTGTATCTCCACTTCCTGTCCGTCAGCGTGCGGGGGCAGCGCCGCCTGTGACCCCCGaaccaacagcaacaacaactgCACCCACTGTGAGCCCATCAGCCTGGAGCTGTGCATGAATCTGCCCTACAACCAGACCAGCTACCCCAACTACCTGGGCCACCTGTCCCAGAGAGAGAGCTCCGTGTCCTGGGAGGCCTCCCTGTTCCCCGCCCTGGTCCAGACCGGCTGCTACCAGTTCCTCATGTTCTACGCATGCACGCTGCTCGTCCCCAAGTGTGACCCGGTCAGCCTGCAGAAGGTCCCGCCCTGCAGGTCTTTGTGTCGTAATGCGAAGGAGAAGTGTGAGTCGGTGCTCGGCATCGTGGGGTTGACGTGGCCGGAGGACTCGGACTGTAGTCAGTTtccagaggagggaggaaacaCCAGCTGTCTGCTGCCAGAGGACGGGGTGGACGagTGCTCCCCGAGCCACTTCAAGTGCCGGTCGGGCCGCTGCGTGCTCGCCTCCAAACGCTGCGACGGGCACCTGGACTGTGACGACCACAGCGACGAGGACAACTGTGGCTGCTCTGAGCGCGCTCTGTGGGAGTGCCCCGGCAGTAAGGTGTGCATCAAAGCCAGCATGATCTGTGATGGGTTCCCAGACTGCCCTCTGCTGGTGGACGAGACTAACTGCTCGGTGTGCCGAGATAACGAGCTGTCCTGCAACAACCATCAGTGTGTTCACCGGACGCTGTGGTGCGACGGAAAGAAACACTGTTCAGACAGCTCTGATGAATGGAACTgtggtaagacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacagacacacacacacagacacacacacacacacacacacacacacacacacagacagacacacacacagacagacacacacacacacac
>TU200866
cacacacacacacacacacacacacacacacacacacacacacacacacacatacatacacacacatacatacacatacaaacacacacacacatacacacacacacagacagagacacaaatacacacacaaacacacacagacacacacagagagacagagacacacacagagacacacacacacacgcacacaaatacacacacacagacacacagagacacacagacacacacacacacagacacacacacacacacagacacacacacacacacacacagacacacacacacacacacacacagacacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacagacacacacacacacaaagagacacacacagagacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacatttt
>XM_039821935.1
atgaagaacaaggaacacaccaggcaggtccggatgtgtctgtgtgtctcttgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtctgtgtgtgtccagtgtgtaaccTGGCCACTGAGCATCGCTGTGGAGACGGCCGCTGTGTGTCCAGAGACTGGCTGTGTGACGGAGACCACGACTGTCTGGACAAGAGCGACGAGCTCAACTGCTcctgtAAGAGCCAGGGTCTGTTGGAGTGCAGGAACGGCCAGTGTGTCCCGTCAGCGTTTCGTTGTGACGGAGAAGACGACTGTAAAGACGGCAGCGACGAGGAGCACTGCAGCCGAGAGCAGActCAGGGTGTGTGTGCCCCCGGTCAGCCCAGCTGTATCTCCACTTCCTGTCCGTCAGCGTGCGGGGGCAGCGCCGCCTGTGACCCCCGaaccaacagcaacaacaactgCACCCACTGTGAGCCCATCAGCCTGGAGCTGTGCATGAATCTGCCCTACAACCAGACCAGCTACCCCAACTACCTGGGCCACCTGTCCCAGAGAGAGAGCTCCGTGTCCTGGGAGGCCTCCCTGTTCCCCGCCCTGGTCCAGACCGGCTGCTACCAGTTCCTCATGTTCTACGCATGCACGCTGCTCGTCCCCAAGTGTGACCCGGTCAGCCTGCAGAAGGTCCCGCCCTGCAGGTCTTTGTGTCGTAATGCGAAGGAGAAGTGTGAGTCGGTGCTCGGCATCGTGGGGTTGACGTGGCCGGAGGACTCGGACTGTAGTCAGTTtccagaggagggaggaaacaCCAGCTGTCTGCTGCCAGAGGACGGGGTGGACGagTGCTCCCCGAGCCACTTCAAGTGCCGGTCGGGCCGCTGCGTGCTCGCCTCCAAACGCTGCGACGGGCACCTGGACTGTGACGACCACAGCGACGAGGACAACTGTGGCTGCTCTGAGCGCGCTCTGTGGGAGTGCCCCGGCAGTAAGGTGTGCATCAAAGCCAGCATGATCTGTGATGGGTTCCCAGACTGCCCTCTGCTGGTGGACGAGACTAACTGCTCGGTGTGCCGAGATAACGAGCTGTCCTGCAACAACCATCAGTGTGTTCACCGGACGCTGTGGTGCGACGGAAAGAAACACTGTTCAGACAGCTCTGATGAATGGAACTgtgAGTTCCTTCTTGTTTCTATGAGGAACGTCGGTGCTCTACACGTCCTGGAGAAgagaagCCACGCGTGTCATTCCAGGAGGAGAGTGTCCGTGCTGTGTACCAGAGAAGagtgTGGGCTGCGTCCTGCAGTAGGTCTCCACCCCCTCAGGAAGAAGAGGATTCTGGGAGGTCGTGTGTCGCGGCAGGGCTCGTGGCCGTGGCAGTGCTCGCTGCAGAGCGGGCCGAGCGGCCACGTCTGTGGCTGCGTGCTCATCCACCGCCGCTGGGCTCTGACGGTCGCTCACTGCTTCGAGGGGAGGGAGAGTGCGGAGCTGTGGAAGGTGGTGCTGGGTCTGAATAACCTGGATCATCCGGGGGTTCACAGTCAGAGCCGCGGGGTGCGCTCCATCATCGTGCACCCGCGGTACAACCGGGCGGTGGTCGACTACGACATCAGCGTGGTGCAGCTGGACTCTGAGGTGGAGGAGACGGCGTTCGTCAGACCGGTGTGTCTGCCTCGGCCGTCTCAGCTCCCTTCTCCTGACTCCTACTGTTACATCACAGGCTGGGGACACATGGGCAACAGGAGTCagtactctctcacacacacacacacacacacTATTCGTATTGATCAATGTGTCAGTTTAGCCGACATGAAGACTATAACTCCCAGAATGCTTTGCGCCGGCTACGACGCTGGAACCGTTGACTCCTGCATGggtgacAGCGGGGGCCCGTTGGTGTGTGAGCAGGACGGGGGCCACTGGACTCTGTTCGGCCTGACCTCGTGGGGTAGTGTGTGCTTCAGCAAGGTGCTCGGGCCCGGAGTGTACAGCAACGTTACACACTTCACCCCCTGGATCCAGCAACAGATCTACATACACACGTACCTGAgggactgacacacacacacacacacacacacacacaca

Function

symbol description
corin Predicted to enable scavenger receptor activity and serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in hypertension and pre-eclampsia. Orthologous to human CORIN (corin, serine peptidase).
nfxl1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Orthologous to human NFXL1 (nuclear transcription factor, X-box binding like 1).

NR:

description
PREDICTED: histidine-rich glycoprotein-like

GO:

id name namespace
GO:0006898 receptor-mediated endocytosis biological_process
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200858 False 982 lncRNA 0.51 4 33237770 33283874
TU200859 False 1047 lncRNA 0.51 5 33221735 33283874
TU200860 True 2946 TUCP 0.43 4 33279775 33283874
TU200861 False 495 TUCP 0.54 3 33273131 33283874
TU200862 False 633 TUCP 0.53 3 33273131 33283874
TU200864 False 746 TUCP 0.52 3 33273131 33283874
TU200865 False 1346 TUCP 0.59 9 33237770 33312272
TU200866 False 620 lncRNA 0.48 4 33221735 33341537
XM_039821935.1 False 2067 mRNA 0.60 18 33282641 33316681

Neighbor

gene id symbol gene type direction distance location
LOC120572895 LOC103365251,LOC100699232,LOC101156360 coding downstream 17058 33198196 ~ 33204677 (-)
trnag-ucc_11 NA coding downstream 19563 33202101 ~ 33202172 (-)
LOC120572914 NA coding downstream 29649 33186655 ~ 33192086 (-)
LOC120572926 NA coding downstream 62451 33158690 ~ 33159284 (-)
LOC120572772 LOC103367226,LOC104955725 coding downstream 131078 33084338 ~ 33090657 (-)
LOC120572848 NA coding upstream 158463 33500000 ~ 33502560 (-)
LOC120572824 NA coding upstream 165301 33506838 ~ 33509846 (-)
LOC120572860 LOC106676966 coding upstream 181574 33523111 ~ 33524779 (-)
LOC120572617 NA coding upstream 183722 33525259 ~ 33527936 (-)
LOC120572619 NA coding upstream 281146 33622683 ~ 33625137 (-)
G148563 NA non-coding downstream 24158 33177386 ~ 33197577 (-)
LOC120573033 NA non-coding downstream 46231 33159293 ~ 33175504 (-)
G148308 NA non-coding downstream 173451 32549868 ~ 33048284 (-)
G148543 NA non-coding downstream 245552 32973356 ~ 32976183 (-)
G148537 NA non-coding downstream 272552 32947734 ~ 32949183 (-)
G148577 NA non-coding upstream 546 33342083 ~ 33347980 (-)
G148578 NA non-coding upstream 9052 33350589 ~ 33351873 (-)
G148585 NA non-coding upstream 62828 33404365 ~ 33404745 (-)
G148591 NA non-coding upstream 124015 33465552 ~ 33466272 (-)
G148608 NA non-coding upstream 172851 33514388 ~ 33514623 (-)
LOC120572612 NA other downstream 89060 33110199 ~ 33132675 (-)
G148509 NA other downstream 259502 32831676 ~ 32962233 (-)
G148536 NA other downstream 275929 32945345 ~ 32945806 (-)
LOC120572814 NA other downstream 410131 32603498 ~ 32811604 (-)
G148472 NA other downstream 466374 32731080 ~ 32755361 (-)
LOC120572843 NA other upstream 154176 33495713 ~ 33498046 (-)
G148879 NA other upstream 383128 33724665 ~ 33789375 (-)
G148918 NA other upstream 679035 34020572 ~ 34021079 (-)
LOC120572826 NA other upstream 704700 34046237 ~ 34201855 (-)
LOC120572812 NA other upstream 740925 34082462 ~ 34176045 (-)

Expression


Co-expression Network