G148543


Basic Information

Item Value
gene id G148543
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32973356 ~ 32976183 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200842
gtctttcacattttattttaagagTTATTAAAACATCTGTAGATAAAGAGACAAAGAAGATATTAGTAGAGATATTAGTTAGTCGTTATCTAAATATGGAGCGAGGCGAAACCAAGTAGTTCCTGTTTCATGGGAGTTGTAGTCAAAGATTTAGCGGTCGTATATAACTTTgttaaaaaacacagataacaaGGTCTTTGGTGGGcgtctgggtagctcacctggtagcgcgggcgcccatatgcagaggctcagtcctcgacacagcggctcagggttcaagtccgacctgcggccatttgctgcatgtcttccccctctctctctctctcccctttccggtctacagctgtcctgtctattaAAGGCTAAAATGCCCAATAAaactatcttaaaaaaaataaataaaaacaggtcTTTGGTCTCTACAAACCAAAAAGCAAATGGCTTCATCAAttcaacccttgtgttgtcttcccgttgaccgACAACTTTTAGTTTGTCTGGGTCGAAATTTTAAATtggaacccttttttttttttcttcaatgtttggtgtttttgcgacactttttgtcgcttttcccgatgtttttctttttttttcttttgataggacagctgaagacatgaaaggggagagagaggggggaatgacatgcagcaaagggccgcagagtcggagtcaaggagtaaacctttatatacagtatgtgcacctgttctaccaactgagctaaccaggcTCTTTTATGCATGtgcagttttatgtttgatCACTGGGTTGGTGTGTGGCTTAGGGGGAAAGCATACAGTTTTTTACCATGTCAGCATGGTGTGACAATATGTCGTTGGATTTGTGCAACTTTTTGtgtttctgggtcaaaattttaactttttttcaacgttttggacgtgtttttctttctttttttttttattctttttttggacatttgagGCATTTCCATAGGACAGATGAAACCATGaaaggggaggagagggagagagagagagagagaggggaaacgacatgcagaaaagggccgcaggtcggagtcgaaaccgggcccgctgcgtcaaggagtaaacatCTATATATGgacgcccactctaccaactgagctatccgggcaccatctgcattttttcttacatttctgtcacttttttcaacgttcttttatcaattattcttcaaatgctataaaatttaataaaacacccaaattcaatgaaagtagtgaactgatcatttattttacttgtgaagagcattttatggaaccatccacgtaatttttttggacaatttggttgaaagaaaccaacATTTATGATTATAGAtttttttagaaaatgggtcaaatttgacccgaggacaacaggagggttaatatTAAGGTGTTTTTGTAgcaaaaccattttttttctttatttttcccgACAACTCTAGTCGATATCCCCGAAGTGGATTTTTGGCTACTTTTTAGTTttcctttattgcatttttagacttttttttgtcaatgtaTTCAACGtgttttttccctttataaattgttaattttaaactttttgtggctttttccaCTTTTATGTCGCTCTTTTTagatattttgtcacttttttgacttcTGACTCTTGAAATACTGACAACATATCAAAGAgcgacaaaaaaattaaaaaagccacaaaaaagttttaaattaaTGTATATTATCGATTGATATTAGGCATTTTACAAACTATCAGCAtcagcatttataatggccgataagggaatattaaaaaaataaaataaaaacggacgaaacacccttcaaccatgttccgATTGTTGGCGTTGCGTAGTTTGTCCACCGGAGGGCACTCTACAAACCTCTCTGTTGGCAACActttgatttttgttgttgttattgtgtttttgttcaaaggactttaagtttcatatcttaagtttgtattttatacatgttatttatcagaactttaatatattttgatgttctgttgtgacaataaaacaagtttatttttaaactgcgttatattattttagtgaggactcataaataccTACAAATAAGTAATGTTagaatctgtttatgttttgtagcGCGTTTCAGCCGACATATCGGAATatcagatttttaaatcaccaaatatttgtctcgatatcggccttaaaaatccttacTGGTCGGGCTCTAACACGCTGGCTTTACAGACTAATAGTgcgttctatttacctcggaactcggttctaacgaggtcaaagtcggaaacacgctCCCCTGACCTCGGATTTACGAGCTCGGAACTCGTACAATCTCGCAGTAGCCCGAGTTCAAAACCCAACGTGGCTGCCCCCCCttgtatcaacagttgtgaaagctgcagtaacataaagttatgagcacttctgtctttatttgtgtcactaaatcagtcgttcacacacaggcatgtccaacttctatctgtggacatgttgttacgctgtttgcatgcacaaaaaacggCGTAATgcattgttatcaactggtattgctaacaatagctaaccgGGCTTAGAgctaaatgaaaacaatgaaaatctgaCTTTTAAATAggacgcattcaactcgggtatgACGTCATTCCAAGTTCCGAGTTCCGAGTTCTGAGGTAAATAGAACGCAGCATTAATATAGAGAGACTTTGTTTACTTGTGTTCGCCCTCAGGAGGCGTGGTCACaccccagggcatgctgggtaaaTAGTGAGCCAGCCACTCCCCCCAGCTGCTCCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200842 True 2795 lncRNA 0.39 2 32973356 32976183

Neighbor

gene id symbol gene type direction distance location
LOC120572810 NA coding downstream 310546 32652305 ~ 32662810 (-)
LOC120572800 NA coding downstream 487003 32476726 ~ 32486353 (-)
LOC120572804 NA coding downstream 525026 32440648 ~ 32448330 (-)
LOC120572803 NA coding downstream 553777 32381753 ~ 32419579 (-)
LOC120572776 NA coding downstream 1421798 31506583 ~ 31551558 (-)
LOC120572789 NA coding upstream 9339 32985522 ~ 32995763 (-)
LOC120572766 NA coding upstream 30397 33006580 ~ 33034300 (-)
LOC120572924 NA coding upstream 73176 33049359 ~ 33055500 (-)
LOC120572785 NA coding upstream 87013 33063196 ~ 33073135 (-)
LOC120572772 LOC103367226,LOC104955725 coding upstream 108155 33084338 ~ 33090657 (-)
G148537 NA non-coding downstream 24173 32947734 ~ 32949183 (-)
G148533 kif1c,LOC106511699 non-coding downstream 33517 32935073 ~ 32939839 (-)
G148510 NA non-coding downstream 34778 32885845 ~ 32938578 (-)
G148471 NA non-coding downstream 140073 32725833 ~ 32833283 (-)
G148520 NA non-coding downstream 142285 32827724 ~ 32831071 (-)
LOC120573033 NA non-coding upstream 183110 33159293 ~ 33175504 (-)
G148558 NA non-coding upstream 199447 33175630 ~ 33261679 (-)
G148563 NA non-coding upstream 201203 33177386 ~ 33197577 (-)
G148555 corin,LOC102795062 non-coding upstream 221611 33197794 ~ 33294488 (-)
G148571 NA non-coding upstream 293223 33269406 ~ 33270814 (-)
G148509 NA other downstream 11123 32831676 ~ 32962233 (-)
G148536 NA other downstream 27550 32945345 ~ 32945806 (-)
LOC120572814 NA other downstream 161752 32603498 ~ 32811604 (-)
G148472 NA other downstream 217995 32731080 ~ 32755361 (-)
G148453 NA other downstream 272951 32652556 ~ 32700405 (-)
LOC120572612 NA other upstream 134016 33110199 ~ 33132675 (-)
corin nfxl1,corin,LOC102297304 other upstream 245552 33221735 ~ 33341537 (-)
LOC120572843 NA other upstream 519530 33495713 ~ 33498046 (-)
G148879 NA other upstream 748482 33724665 ~ 33789375 (-)
G148918 NA other upstream 1044389 34020572 ~ 34021079 (-)

Expression


Co-expression Network