LOC120572785


Basic Information

Item Value
gene id LOC120572785
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33063196 ~ 33073135 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822223.1
TGGATCTACGTTCTCTCAGCTTATGGCTCCATTTCTGTTCCTGTTGTTATTTCTCTCTGGAGCAACTTCTGacCTGATTGAGGTAACCGTGAACCATGGAGATGATGTCATTCTGCCATGTCAGGCTGCTGATTCCGCCATCATAGATGTAAAGTGGAGCAGACCTGACCTGGAGCCAGATACCGTCCTCTTATACAGAGATGGACACTTGGACACAGAAGACCAGCATCACTCCTTTAAGGGCAGAGTggagctggtggacagagatCTGAAGGATGGGAATGTGTCTTTAATTCTGAAGAATGTGAACATACACGATGCTGGAACATACGAATGTCGAGCTGCACTAGGTGGTTCAGGACGTACAAAGGGAGACACTGACTCTGAGCCAATCAGAACCTTCCGTCTGCAGGTTCCAGAGCCAGCAGacatGACTGTGATACCAGTGCCTGGAGAAAATGCCATTCTGCCATGTTATGCTGATGATATCTCCATCAGACTTGTAAAGTGGACCAGAGCTGACCTGAAGCCAGATACCGTCCTCTTATACAGAGATGGAGACTTGAATACAGACGACCAGCATCCATCCTTTAAGAACAGGGTGGAGCTGAGGGACAGAGATATGAAGGATGGAGATGTGTCTTTAACTCTAAAGAATGTGAACATCATTGACTCTGGAATATACGAGTGTGGAGTTAAAACCGGTGATTCAACACGTACAAAGGGAGACACCGACTCTGACCCAATCAAAACCATGAGAATCCTTCTGCAGGTTCCAGACCAAGaccGGATTGTGGTAACAGTTGATCCTGGACAGGATGCCATTCTGCCATGTCAGGCTGCTGATTCCTCCATCAGCATTGTAGAGTGGACCAGACCTGACCTGGAGCCAGATATCGTCTTCTTATACAGGTATGGATATTTGGATCCAGACGACCAGCATCCAGACGACCAGCATCCAGACGACCAGCATCCAGACGACCAGCATCCAGACGACCAGCATCCATCCTTTAAGGACAGGGTGGAACTGGTGGACAGAGATCTGAAGGACGGAGACGTGTCTTTAATTCTGAAGAATGTGAGCAGAAACGACAGAGGAACATACAAGTGTCTAGTTATAACCGTTGACTCTATGCAAATCACGATCATCGATCTGCAGGTTCCAGgaaATTCCTCTCCTGTAGGCCGATACGTTGGACTGGCAGCCGGTGGACTGCTTCTTGTAGCTGCTGCAGTGGTTGGTGTCCTGATATATAGAAGACGTGAGAACAAGAGATCAGGACAACCTGCTGATGAAGCATCAGCCGATAACTTCATCTAACAACTCCCAGAGCTCTTTACACCTGACTGTTTTGTCATGTGTTGTATATACAACATGTCTATCATTACTGCTGTGGGTGTGAGGTCATGAGCTTATCTGCTATTTGGTCAGTTTGCCCCCCCCACCCGCCCATCATGGTGGGGGGGTTGTGTATCTGAGTCGGGGATCTGTATTATCTGGAGCTCTGAGATCCTCTAGGGTCTCCCATGAGGAGATGGTCTCACAGGAGGGTCAGACAGAGAGACCCACTTcaaattacttttactttaaatacattttcctcaAGTAAAAACTAAATTACTCGATATTCAAAAATGTGTTCAGATAAAAGTCAAATGTGTTAAAATGTTTAACAGCGGAGTGATGATTGAATGAAGAACATAGAGATGTTCAGACAATATCAACTCAGCAGTAATACACAGAAATGCTTTTCTCCATTAAATAGATTAAATTTGATAATATTATGTATGTAACAATAATCTACTCTACACTGAGCTGTATCCCTGCAAGCTCTCAACTGGAAATTATGTTTCTTTAGTTTGAAATATCAGCAGACGGAGCACCCACCAAATATCTTATAATCAAGTGTAGAGAGCTCTTCAACATCTGTTAGGGTGTTTTGGtaagaatacattttatatgGAGAGAATTTTAAATGATTGTTTTCTGCTCGGCCATATGCCGTGTATTGCCTGCTAAGAATGTGATATTTTCAGCTaatgatttaaaataaattaacctTGAATATAGTTGATTACATTGTGaatattgttgttattgtaaatataaaatcagctgatgcagctcagAATATTTCAGAGGAACAGCGACGAGTCTGTCTCTAAATAAGACCTTAAACTGGATtactaggctcgttcgagatgagccagatctgcgcagaattgatcaccggcgatcggcacccaatgcatgccggttagatttgtgtccgacttaatcccgacttgctctgatgtcatgcacacgtgggcaacgataatctcacgagaccaaggcgtcCGCAGTTCTGTGACACAGGTAGACACAGGTAGGATTTTTTTctccgcccccggctgctgccgcctgctctcgtccgctttacaggcgaggcacagttcatctcgaacgagcctactaTCTATGAAGTATTATTTCCATGATGTTTGTCAAAAggaaatgttatgaaatgtgAACTATACCAAAGTGATGAGATTTGAAATCAGTTGATAATTATTTaatatgaatgaatggatgaaataatAATGATCAGAGACATGATGGAAGTTTATAACTCAGTTTTAACATTTAGATCCCTTAATGCGCTTTAAACTCTTTTAGCTTATTTtaataaatctttatttttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822223.1 True 2687 mRNA 0.43 5 33063196 33073135

Neighbor

gene id symbol gene type direction distance location
LOC120572924 NA coding downstream 7696 33049359 ~ 33055500 (-)
LOC120572766 NA coding downstream 28896 33006580 ~ 33034300 (-)
LOC120572789 NA coding downstream 67433 32985522 ~ 32995763 (-)
LOC120572810 NA coding downstream 400386 32652305 ~ 32662810 (-)
LOC120572800 NA coding downstream 576843 32476726 ~ 32486353 (-)
LOC120572772 LOC103367226,LOC104955725 coding upstream 11203 33084338 ~ 33090657 (-)
LOC120572926 NA coding upstream 85555 33158690 ~ 33159284 (-)
LOC120572914 NA coding upstream 113520 33186655 ~ 33192086 (-)
LOC120572895 LOC103365251,LOC100699232,LOC101156360 coding upstream 125061 33198196 ~ 33204677 (-)
trnag-ucc_11 NA coding upstream 128966 33202101 ~ 33202172 (-)
G148308 NA non-coding downstream 14912 32549868 ~ 33048284 (-)
G148543 NA non-coding downstream 87013 32973356 ~ 32976183 (-)
G148537 NA non-coding downstream 114013 32947734 ~ 32949183 (-)
G148533 kif1c,LOC106511699 non-coding downstream 123357 32935073 ~ 32939839 (-)
G148510 NA non-coding downstream 124618 32885845 ~ 32938578 (-)
LOC120573033 NA non-coding upstream 86158 33159293 ~ 33175504 (-)
G148558 NA non-coding upstream 102495 33175630 ~ 33261679 (-)
G148563 NA non-coding upstream 104251 33177386 ~ 33197577 (-)
G148555 corin,LOC102795062 non-coding upstream 124659 33197794 ~ 33294488 (-)
G148571 NA non-coding upstream 196271 33269406 ~ 33270814 (-)
G148509 NA other downstream 100963 32831676 ~ 32962233 (-)
G148536 NA other downstream 117390 32945345 ~ 32945806 (-)
LOC120572814 NA other downstream 251592 32603498 ~ 32811604 (-)
G148472 NA other downstream 307835 32731080 ~ 32755361 (-)
G148453 NA other downstream 362791 32652556 ~ 32700405 (-)
LOC120572612 NA other upstream 37064 33110199 ~ 33132675 (-)
corin nfxl1,corin,LOC102297304 other upstream 148600 33221735 ~ 33341537 (-)
LOC120572843 NA other upstream 422578 33495713 ~ 33498046 (-)
G148879 NA other upstream 651530 33724665 ~ 33789375 (-)
G148918 NA other upstream 947437 34020572 ~ 34021079 (-)

Expression


Co-expression Network