G148308


Basic Information

Item Value
gene id G148308
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 32549868 ~ 33048284 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200514
agaaaaaaaatatttattggatACAGATACAAGAGTAAAACAGTTTAAAAGCGCAGTGGGTCTGAGTTGATATTGTCTGAACCTCTCTGTATCGGCTCCTTAATTCAAACCTTATGATGAAGAACATTAGTTATCaattaagtagcctacatttgttTTCCCTGAAGCAACTTTTCCTTGGGTAAATATTCTAGTTCTTTAAAGCTAAAGTTAATTTGAAGTGAATCCCTCTTAGTCTGACCCTCGTCTGGGACAAATCTGTCATGGGAAACCCTACAGAGCTCAGAGCTCCAGATGATACAGCTCTCAGACTTATTGGGTACAAAAGCCCCTCCACCACGACAAGGTGGAGATTCACGGAGGGGAAATGATTTATCATCATCAGCAACAGCAGGCGGTCCTGGTCTCATGTcattatgtcttttatttatcagGACcccaacagttacaacagttaGAAGCAGTCCACCTGGAACAGCTGCTGCCAGTCCATGGTATCGGCCTGCAGGAGAGGAGTTTCCATCCTCGGGGACATCATTCATTGAGTTTTCATCCATGGAGAGTGGACTCTTCtgacCTGGCTCTGGAACCTGCAGACggatgattctgattggctcagAGTTGATGATGGCTCTCTTTTTACGGCTTGAATCATCTGGTTTAACTCGACACTCGTATGTTCCAGTGTCAATGCTGCTCACATTCTTCAGAATTAAAGACACGTCTCCATCATTCAGatctctgtccaccagctccACCCTGTCCTTAAAGGATGGATGCTGGTAGGTTGATTTCAAGTGTCCATCGATGTTTAGGAGGACGTACTCTGGCTCCAGGTCAGGTTTGATCCACTTTAAAACTGTGATGGAGGGACCAGCAGCCTGACATTTCAGAGTGACATCATCTCCAGGGTGCACTGTTACGTCagtgttgtctgaaaaacaataacaaaacattttaatcaataatgaataataaaagGCGTCCACAGGTGTGACCCTGCACATTGCACAGCTAAATGCACGTCACACCCCCCTCTCAAAGCCGTACATTGTATCAAATTAGACCAAAACATAGaatataatgttgtttttcttgGACAGAAAACGATCAGTTATACCCTAATTAAAGGCCAAATGCCTAAA
>TU200515
gtgaagtgagacacggtgaatggcttctttgggaatatttatgttgacgtttatgtcctcattcatctcGTTTCCTTTTTGCATAGCCGCTGCATGTTGACACACCTGTAAGTTAAAGTTAAACAAGTTGCAATGTAAGCTAACTAATTAGCGGCTGAAGTTACTGCGTAGcgatcatagaccgtatataaagatgtGGCGATAGGCGCTCACCAGATCTATTGTCATTGCTTGAATTGGAGGACAGAagtttcagcggattgattgatagctgccctccagagtgaacagaactgtgtccatggcaacgctctgctatgcatggcaacggtgtgttatccttagcagcgtctgttatcaagaaataacagagcGCATTTTAcgttagaattcaaccaagccatgtaataaatataataaatgcattATGGTAAAGTCCGTCACTGCCTTTAGAGAACTAGAacattttacttgagtaaaagtactgttacttggggcgacctctagctcacccagtcagagcgtgcgccccatgtaggctgagtcctttgcagcggcccgggttcgagtccaacctactgcctttgctgcatgtcgtccccatctctctcccccctttcctgtctatgcactgtcactctgaaataaagggaaaaaaaaaaccaaaataatcttttaaaaagtACTGTTGCTTTAAAGAGAAACAGTTACTTAACTAAAAGTACTTTTACTATGAATGAATTGTAGTAAAAAACAAAGTTAGTCTACTTATTTGATACCTGAAAATTATGCTCAGATAAAAGATAAGTCAGTTAAAATGTTCTTTAAGAGCAGAATGAAGCAGCCAACACAGAGATGTTCAGACAATATAAACTCAGCAGCAGTACACAGAAATACTTTGCTCCATTAAATGACAAATGTAATCCATTACTTCAGCCCAGCTGTACTCAGCGCTAGTATATTAGGCTATAGCAAGCTTTAAACAGAAAATGATGTTTCTTTAGTTGTAAATATCAGCAGACAGAGCACTCACCAGATATCTTATAATCAGGTGTAGAGAGCTCTTCAACATGTtatctctttgtgtgttttggtggTAATACATTTTATATGGAGAGAATTTTGAATGCTTGTTTTCTGCTGGGTAATATAAAGCCTTGTGGGGCCTTCTAAGAATAATATATTTTCAGCTAATGATATAATATCAGCTAACATTGAATGGTTTAAACTGAGGAGTTGATTACATTGtgaatattgttgttgttgtaattataaaatctgatgactaGTCTGTCTCTAAATAAGACCTTAAACAGGATTTATTATCTATGAAATAGATTTACATGAAGTTTGTCAAAGGAAATATTATGAAATGTGAACTATACCAGAGTAAAAAACATTTGAGTTATCAACTTCCATCATGTCTcttatcattattatttcaaCCATTGATTCATATTCAATAATTATCAACTGATTTCAAAGATCATCACTTTGGTATAGTTcacatttcataacatttccTTTCACAAACATCATGTAATTCTACTTAGTAGATAATAAATCCAGTGTAAGGTCTTATTTAGAGACAGACTCGTCCTCTATGTCCCCCTGAGATATTCTGAGCTGCATCAGATGattttataattacaataaCTACAATATTCACAAAGTCATCAACTCCTCAGTTTAAACCATTCAATGTTAGTTGATATTATATCATTAGCTTAAAATATAACATTCTAAGCAGGCAACACGTTATTACAGTTATTTGGCCGAACAGAAAACTAAAATGCAAAATTCACTCTATAAAGAAATGTGCAATCAACTCAATCAGACACCCAAACAGATGACATGATGAAGAGCTCTTTACACCTGATTATAAGATATTTGGTGGATGCTCGGTCTGCTGACATTTCAATGTGTTAAAAGTACTCAGCACTGACTACATTATTGGAGCAAAGCATTTTTTGTGTATTGCTGTTGAGTTTATATTGTCTGAACATCTCTGCTGTTGAATTACATCTTTACTGacttacattttaatttatctGAGCACATTTTTCAAGTATCAAATATTGGTTAATATTGTTTTTACTTGAGGAAATtgtgttaaaagtaaaaTATTCAATTTCTCTGAATGTGAAAGGTAAAGGTAGACAGTTGATTTGAATCACTCTTAGTCTGACCCTCCTCTGGGACCATCAGAGCTCCAGATGATAAAGATCCCAGACTCAGATACACAAACCCCTCCACCACGGTAAGGTGGTGATTCACGAAGGGGGCAAACAGATCAAATAGCAGATTTTCACATGACCTCACACCCACAGAAATAATAAGAATCATGTTGTAAATACAGCACATGAGAAAACAGTCAGGTGTAAAGAGCTCTGGGAGTTGTCAGATGACCTGAATGGCCGATGCTtcatcagcatcatcatcatcagcagacGGTCCTGATCTCTTGTTCTTATGTCTTTTATACATCAGGACACCAACCACTGCAGCAGCTACAAGAATCAGAACACCTGCTGCCAGTCCACGGTATCGGCCTACAGGAGAGGAGTTTCCATCCTCGGAATTGGTTCTGTAACCTGCAGACGGATGGTTCTGATGGTTCTCAGAATGCTTAAGTCAGCTGCTCTCTTTTTGCGTCTGGAAACACCGTCTTTAACTCGACACTCGTATGTTCCAGCGTGAATGCTGCTCACATTCTTCAGAATTAAAGACACGTCTCCGTCCTTCAGatctctgtccaccagctccACTCTGCCCTTAAAGTCTTTATTCTGGTAGTCTGTTTGCATCGTATTACTTCTGTAAAAGAGGACGTACTCTGGCTCCAGGTCAGGTTTGATCCACTTTAAAACTGTGATGGAGGGACCAGCAGCCTGACATTTCAGAGTGACATCATCTCCAGGGTGCACTGTTACGTCagtgttgtctgaaaaacaataacaaaacattttaatcaataatgaataataaaagGCGTCCACAGGTGTGACCCTGCACATTGCACAGCTAAATGCACGTCACACCCCCCTCTCAAAGCCGTACATTGTATCAAATTAGACCAAAACATAGaatataatgttgtttttcttgGACAGAAAACGATCAGTTATACCCTAATTAAAGGCCAAATGCCTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200514 False 1145 lncRNA 0.43 3 32549868 32673155
TU200515 True 3155 lncRNA 0.38 5 32549868 33048284

Neighbor

gene id symbol gene type direction distance location
LOC120572800 NA coding downstream 63515 32476726 ~ 32486353 (-)
LOC120572804 NA coding downstream 101538 32440648 ~ 32448330 (-)
LOC120572803 NA coding downstream 130289 32381753 ~ 32419579 (-)
LOC120572747 NA coding downstream 926055 31435815 ~ 31623813 (-)
LOC120572924 NA coding upstream 1075 33049359 ~ 33055500 (-)
LOC120572785 NA coding upstream 14912 33063196 ~ 33073135 (-)
LOC120572772 LOC103367226,LOC104955725 coding upstream 36054 33084338 ~ 33090657 (-)
LOC120572926 NA coding upstream 110406 33158690 ~ 33159284 (-)
LOC120572914 NA coding upstream 138371 33186655 ~ 33192086 (-)
LOC120573060 NA non-coding downstream 9331 32539319 ~ 32540537 (-)
G148416 NA non-coding downstream 32333 32506560 ~ 32517535 (-)
G148310 NA non-coding downstream 56064 32492984 ~ 32493804 (-)
LOC120573058 NA non-coding downstream 157660 32388827 ~ 32392208 (-)
G148409 NA non-coding downstream 192719 32356458 ~ 32357149 (-)
LOC120573033 NA non-coding upstream 111009 33159293 ~ 33175504 (-)
G148558 NA non-coding upstream 127346 33175630 ~ 33261679 (-)
G148563 NA non-coding upstream 129102 33177386 ~ 33197577 (-)
G148555 corin,LOC102795062 non-coding upstream 149510 33197794 ~ 33294488 (-)
G148571 NA non-coding upstream 221122 33269406 ~ 33270814 (-)
LOC120572607 NA other downstream 174319 32132336 ~ 32375549 (-)
G148246 NA other downstream 812186 31428928 ~ 31737682 (-)
LOC120572802 NA other downstream 876244 31277977 ~ 31673624 (-)
LOC120572919 NA other downstream 1493483 31046646 ~ 31056385 (-)
LOC120572603 NA other downstream 1718538 30829613 ~ 30831330 (-)
LOC120572612 NA other upstream 61915 33110199 ~ 33132675 (-)
corin nfxl1,corin,LOC102297304 other upstream 173451 33221735 ~ 33341537 (-)
LOC120572843 NA other upstream 447429 33495713 ~ 33498046 (-)
G148879 NA other upstream 676381 33724665 ~ 33789375 (-)
G148918 NA other upstream 972288 34020572 ~ 34021079 (-)

Expression


Co-expression Network