RNA id: TU201337


Basic Information

Item Value
RNA id TU201337
length 436
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G148879
representative False

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33724665 ~ 33789375 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CtgaaggatccttccttggaAGGACTAGTCCtaccaaggaaggatccttgacattgagaaacagcttctgtctctctctatgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctgtctctctctgtctctctctctctctctgtctctctctgtctctctctctctgtctctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctgtttctctctctctctctctctgtctctctctctctctctctctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005641595.1 lncRNA downstream 4264 33719477 ~ 33720401 (-) True LOC120573021
TU201310 lncRNA downstream 50596 33579951 ~ 33674069 (-) True G148866
TU201307 lncRNA downstream 61447 33576915 ~ 33663218 (-) True G148864
XR_005641585.1 lncRNA downstream 97533 33626507 ~ 33627132 (-) True LOC120573011
XR_005641550.1 lncRNA downstream 98299 33625875 ~ 33626366 (-) True LOC120572977
TU201363 lncRNA upstream 18334 33807709 ~ 33808641 (-) False LOC120572957
XR_005641521.1 lncRNA upstream 18419 33807794 ~ 33822184 (-) True LOC120572957
TU201349 lncRNA upstream 20199 33809574 ~ 33822161 (-) False LOC120572957
TU201361 lncRNA upstream 120758 33910133 ~ 33988767 (-) False G148892
TU201382 lncRNA upstream 126223 33915598 ~ 33916227 (-) True G148909
XM_039822167.1 mRNA downstream 27418 33670442 ~ 33697247 (-) True LOC120572751
XM_039822168.1 mRNA downstream 27418 33670667 ~ 33697247 (-) False LOC120572751
XM_039822453.1 mRNA downstream 82623 33637494 ~ 33642042 (-) False LOC120572928
XM_039822454.1 mRNA downstream 84660 33637494 ~ 33640005 (-) True LOC120572928
XM_039821941.1 mRNA downstream 99528 33622683 ~ 33625137 (-) True LOC120572619
XM_039822268.1 mRNA upstream 147715 33937090 ~ 33947911 (-) True LOC120572813
XM_039822218.1 mRNA upstream 163877 33953252 ~ 33988038 (-) True LOC120572783
XM_039822219.1 mRNA upstream 191020 33980395 ~ 33988039 (-) False LOC120572783
XM_039822220.1 mRNA upstream 191020 33980395 ~ 33987646 (-) False LOC120572783
XM_039822314.1 mRNA upstream 207678 33997053 ~ 34006889 (-) True LOC120572834
TU200929 other downstream 226649 33496634 ~ 33498016 (-) False LOC120572843
TU200861 other downstream 440791 33273131 ~ 33283874 (-) False corin
TU201394 other upstream 231197 34020572 ~ 34021079 (-) True G148918
XR_005641496.1 other upstream 375752 34165127 ~ 34176045 (-) False LOC120572812
XR_005641508.1 other upstream 562657 34352032 ~ 34353438 (-) False LOC120572901
TU201452 other upstream 623905 34413280 ~ 34419912 (-) False LOC120572624
TU201453 other upstream 623905 34413280 ~ 34419912 (-) True LOC120572624

Expression Profile