fam113 (LOC101467090)


Basic Information

Item Value
gene id fam113
gene name LOC101467090
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 10579509 ~ 10590117 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822692.1
AGCATCATCAAATTGCCGACACCTGTTGTCGAACAAAAAAAACGGTAGAGTCGAGTTAAAAGTTAAAATCTGTATGTTAAAGCTACAAAATAAGACAATGGCAGAGTTTTGAACTTGTTCTAATTGTCAAACAACTTTAAAAGTGGAGCGAGGGGCCAGTTGGTGAAGACATTGCGTGTTTAACGTTAGGTCCTGGAACTAAAAACGTCCAGATTGTGATGATTCACTTTCCATTGACGTTAAAGTTAGCcaacgttaatgttagctagctagctagctaactagatTCAAAACATCAACAAACAAAGAGTTTTCACGAGTCAAATCTTAAATATTTGCCCCTAAACTCAACAATGGAGATGATGAAGTGTGTGAGCCACCAGCAGGCCAGCCAGCTGCTCCATAACAAGTTCATTGTGGTGATGGGAGACTCCATTCAGAGGTCTGTGTACAAGGACCTTGTTGTGCTGTTGCAGAAGGACAAGTATCTCACTGCAAAACAACTCAGGAGCAAGGGTGAGATGAGCTTTGAACAGGACTGCCTGGTGGAAGGAGGTTGCCTAAATCAAATGCACAATGGAACGGGGTACCGGGAGGTTCGGCAGTTTCAGTCCGCCCACCACCTCGTACGCTTCTACTTTGTGACGCGCGTCTACTCTGGCTACATGCAGAGCATCCTAGAAGACTTCCGCCAAGGCTTGAAACCTGATGTAGTAATTCTCAACTCCTGCGTTTGGGATATCTCAAGATACAACTCCAGTTGGCTTGATAACTACAAGGAGAACCTACATAAGTTATTTGATGAGCTGAAAGTGACTCTGCCAAAGGAAACCCTGGTCGTATGGAACCTCACCATGCCCTTAGGAGAGAGGATTAAAGGTGGTTTCCTGGTCCCAGAGATCGAGCACAAGGTTCCCCAGCTGCGTTATGATGTGATTGAAGCCAACTTCTACAGCGGGACTCTGGCTGACGCCTACGGGATGGATGTGTTGGACCTTCACTTTCAGTTCCGCTTCTCCCTGCACCATCGTACGAATGACGGCGTCCACTGGAACGCCCTTGCACACCGCAAGATAACCTCTCTGCTGTTACAGCACTCTGCACAGGCCTGGGGGGTTACTATGCCCTGTCCACTGACTGCTGTTGATCATGCTGAGGTTACTGCTCAGCAGGCAGCCAATGCAAATGCTACCAAACCTGCAGAGCGACACCCATCAAAGGGAAATTACAACAGCTATGACGGCTACAGGGAGGAGTTCTTCAGTGATAACCCCTCTTTTGGTTACTTCAACTTTGAGAATTACCCACAGCCACATACTTCATACCATGAGACCAGACGGGTTAGAAATGGTTTCGACTACAAGCCTCCCCACCACTTTGAGCCCTACGACGAGCACCATCATCAGGACGTGATGAAGAGCCGCCATGCCAGGCGCCACTATGCTCCGTACACCCATCACAGACCCAGATTGAACAACCACAATGGTGGCTTCTACTGAGGCAGGGAGTTTTTACAAGATTCAGATATGGTCAATTTCCATTTATCTACTGCAGACTCTTGCCTCACCTGCAGTACATTGTTTCACAACAGTCCCATTTGTCTGTGAAGGTTCTAAGTCGTCCAGGTCATGGTAGTTCTGTGATAAGCAAAGGCAACTGGGCTTGCTAGAAATTCTCTCATCCAAAAGGCTTCTTCAAATCTGACTAGTGGGGAGTTCCAGATATTTACACACAACCCACCAGAGGTATCTGGAACTCACTAATAGTCAGTCCGGATCATGGATGTATTGGTCAGATTTAAAGAAGCCTTTTGGATGAGAGCCGTCTTGAAGAATTTCTAGCAAGTCCAGTTGCCTTTGCTTATCACAGAACCGTCCCATTTGTTCAACACCGAACTATACATGCTCGTAACCAGGAGCCAACATGAATCCTCAAATGGCTTAGTTCACGCTCAAGACTGTTAATGACCTCACATTCACATATTggtccttttttcttttaatttttttttttttttcttttttagtatGTTCTTTGCCACCAAAAATTTATTTgcaatattttacatttcaaagccttttTAATTCTGCACTTTAAATGTCCGTTGATGTTTTCTATTCAAGTTGATGCTAAGATTtcaagtgttgttgtttttttttttattttattttgttttaacatgAATCCTTTATTAAAGTTCTAAATTAATGATCCTTCTGAATCTTCTCAATGTCCCACACGGATCAAGTATGGTATAAAGATTTAGTTTCCTTTAAGCCTTACAGGTGCTGTACTTGATATTCTGAACCTTTTTTAATATAGCGGAGGAAttgcatcctgtgtgtgtgtgtctgtctccactTGTTTTCTGAATATCGAGTAGAGCCTCTCAAAACATTTACAATGTAATTCTTGTTCATCACTTAGATGAACACTGATTAGGAAACAAGTGTGAGAcatatggagagagagaagctcTGGCGTTTGCCCAGGCCTGTTAAGATGTAAATCAACCTGTGCTGTGGCACTTTAGAGGACATGTTCCACATGTTATACCAAGTTCTGGTTGTTACACTattaatgtattcatttaataaaatgaaCTCCATAACAATA

Function

NR:

description
PC-esterase domain-containing protein 1A-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822692.1 True 2616 mRNA 0.43 9 10579509 10590117

Neighbor

gene id symbol gene type direction distance location
tdrd7b LOC103364796,LOC104955570 coding downstream 14318 10542200 ~ 10565191 (-)
si:dkey-85k7.11 LOC104946303,LOC103360465,LOC101470297,LOC102289136,LOC102796032,LOC100710889 coding downstream 803162 9770280 ~ 9776347 (-)
LOC120573658 LOC103360465,LOC108242867 coding downstream 811602 9766267 ~ 9767907 (-)
si:dkey-85k7.10 LOC103360461,LOC104946296,LOC103480570,LOC107084109,LOC106963058 coding downstream 813898 9763672 ~ 9765611 (-)
LOC120573654 NA coding downstream 817881 9758545 ~ 9761628 (-)
rpgrip1 LOC103146607,LOC106933061,LOC103480551,LOC107099025 coding upstream 881 10590998 ~ 10602496 (-)
btr33 LOC104955567,LOC103364808 coding upstream 12625 10602742 ~ 10607423 (-)
syt4 syt4 coding upstream 85323 10675440 ~ 10697392 (-)
sema4f LOC103364805 coding upstream 121008 10711125 ~ 10776189 (-)
trnaa-cgc_1 NA coding upstream 236665 10826782 ~ 10826853 (-)
LOC120573736 NA non-coding downstream 44215 10535104 ~ 10535294 (-)
LOC120573713 NA non-coding downstream 47662 10531684 ~ 10531847 (-)
LOC120573737 NA non-coding downstream 50137 10529189 ~ 10529372 (-)
LOC120573725 NA non-coding downstream 52959 10526387 ~ 10526550 (-)
LOC120573244 kdm6b,tmem88,LOC107664277,LOC106608825,LOC106577775,LOC104964151,LOC103375639,LOC103146602,LOC102237254 non-coding downstream 55718 10475237 ~ 10523791 (-)
LOC120573684 NA non-coding upstream 37225 10627342 ~ 10629460 (-)
G142522 NA non-coding upstream 98659 10688776 ~ 10689062 (-)
G142514 NA non-coding upstream 99295 10689412 ~ 10711125 (-)
G142516 NA non-coding upstream 117918 10708035 ~ 10709403 (-)
G142678 NA non-coding upstream 297645 10887762 ~ 10889145 (-)
tmem256 tmem256,LOC103358394 other downstream 1113730 9457850 ~ 9465779 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 1425576 9130643 ~ 9153933 (-)
LOC120572236 LOC102083041 other downstream 1474278 9032947 ~ 9105231 (-)
G142173 NA other downstream 1479095 9098741 ~ 9100414 (-)
LOC120572366 NA other downstream 2035777 8517023 ~ 8543732 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 41358 10631475 ~ 10657973 (-)
G142669 NA other upstream 339905 10930022 ~ 11144738 (-)
gpha2 gpha2 other upstream 559734 11149851 ~ 11154529 (-)
G142745 NA other upstream 851844 11441961 ~ 11443939 (-)
prox3 LOC104947722,LOC103363229 other upstream 864898 11455015 ~ 11467019 (-)

Expression


Co-expression Network