si:dkey-85k7.11 (LOC104946303,LOC103360465,LOC101470297,LOC102289136,LOC102796032,LOC100710889)


Basic Information

Item Value
gene id si:dkey-85k7.11
gene name LOC104946303,LOC103360465,LOC101470297,LOC102289136,LOC102796032,LOC100710889
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 9770280 ~ 9776347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821447.1
tacttttacttaagtaagtgatcagaatacttcttccaccactgtctaTGATGCTAACACAATGTATCTGCAAGAGGAACCATCTCTATATCTGGGCAAATCTATCAACCTATAAGAGCATGTTTGACAGAGGAACTATCTGGTCAGATGTAAAGTACATACTACATGGGTGTGAATTTATGAGATAAACTAGTATACAACCTGGCAGAAGCCTGTGCAGAGATGCATGGCTGCACAGACATTGCAGGAGCAGATAAATCAACTGTTCAGCCAATATATTcactctgagctgctgctgctttgcATGCATGCATAGTCTCGGTCCAACAGTTATTACGCTCGACTAGATCATGACGGCAACACCAATACAGCATGACACATTAACCAAACATTCCTCATTACCACATGGAATTTCTTTATTCATAGCGGTGTGTGGCAGCACATGTCGCACCCCCGAGTGACGAGCAAAGGAGCCTGTTTTTGTATTACTTTACTCAAGTTGTGTGACGATGCATCTGTTTTGCACCTGCGCCCTATCCTTCTCCCTGCTGATGGCGTCCCCCCTGGTGAGTGCCAGTGTGTCCAACAGCTTCAAAGACTGCAGCCATTTTTTCTACATGCAGACACCACCTGTAGGGATGAAGGGCACCAACCTGAGGAGGGTCTGCCAGAAGTACGCAGACAAACAGCGCTACGCCACGTTGTATGACAGCAGTCGGCACCTCCCCCTCTACTCAGCCTACATCTTTAAGAAGTCTGATGGGAAGAGGAGGATGGACACACCATGGATGTATGAGCCACAGTTGGTTTCTGATGATGAGAGTGGCAACATGAGAGCCCTTCCCCTTACTGAAGACACCCCCCCTCTGATTGAAGACAGCCAGGCCGTGTTGGAGGACTACACAGATGCTGTAGAATATAGACGTGGCCCACTGAATCCTGACctgcaccaatcacagccaGATGACAAATCCTCCACATATACTCTGACTAATGTAGTCCCATTAATCACAAACTTCCTGGACGCTTCCTGGAACCCATACATGGACATCATCCGCCGCCGCCTCAACAACTTCTGCCACGGCACATCTTTCATGGTGACAGGGGTGACCGTTTCTGGGGGGACCCTCAAACGAGATAACAAGGACCGACTCGCAATCCCAAAACACCTCTGGCTGGCTTACTGCTGCCCGCGGTTTGACCATAACTCTCCGTATGAGGTGAGGTTCATGTTCCCAAGTTATGGGGGCTATGCACTGAATGAACAGACTGACAACAGCGTGGTGGAAGTCCCTCTAAAGACTCTGGAGATTTTCCTGAAGAGCCAGTCAGACATAGACAGTGACCTGACTATTTTCTACAAGGGGTGTGTGTCAGAAAACAGCTTCAGGAAGAAGAGAGACCCGACCAGTGTTTCAGTATCAGGGGACAATCCTGAACGGGATGAACATGGATAAAGTATACCTATAAACAGAACTAGCTTGGATAAACTTGAATAGAAGCAGTGTTAGGTAGTCCTGGCTTTacgtgttttaaaaaaaaatttaattggaATTATATTAAGAAGGGAAAGGGCTCTTCATTTTGCCTTAGACAGGGCAAATTTAGATTCAGATTATAGCTCTCTATCAGTAGTAGTATGTGAGAAGGGGCTGTAGTACACATGACCAATAAGCACCACCAAAGGAAATAATGTGTAAATGCACATTAAAAGGTGAAAACTAGTATCACACTCCCATAAAGTCGGGGGCTTTACAAGACACTGATTATAAAAAattattatcaaaatcaaagcagcagagCCTGAGGTATCCTGACTTTACTGTCAAATATCAGCCAAGGCCCCAGGACTtagatcctacatttcccatcatGCAATGCAACTGTATGGCATGTGTATTTCAAAGAGAAGAAAGTCCACTTGTAGGCTATACTAAATCAGTTTAGGCATTAGTCCAAGAAATGGGTTTATACTACAGGCCTATATATGGCAGTGCTGAACAAATGAAGCGTCAATGCTTCAATATTTTGCAAACTAATCTTATCTTATGAAACGGTCTATGAGaaatatgttataaaaaaggtgctaaaacatacaaaaaagtgCACAAACAGGCCAGAGCTAAAGCTGTAAAAATGTCTTTATAAGGAGTGTAGCTTATATAGTGACTTAATGTTTTTACTGtggatatgatttttttttttttttgatgattttttggggcattttaggcctttat
>XM_039821448.1
CCGTCCGTGTGATACCACGTGACTGGACATTGACAAGCTGCTAACCAATGTTGTAGCAGGGCAAACACACCCCTATTTAACAGCCTCAAAACCGATGTGTACTGCACTTTAAAAAGGCATTCTCATATGCAGGGCGTCATTGCTGGAATTAGCCAGTAAACTGAGCAGCGAGGCCAAATTTAgcattatattgtatttttaaacatacatcGAAAACAGCCAGCTCACTACACATTCACGAGGCAGGAACGTGTAGACACAGAATAACGAAATTAACTTATACAAAGTTGTTTCATGGACTTTGTAGTCAATAGAATCGTGCTTCAAATGCATAATGCTATATTTTGAGTTATTAGTTATCAAACCCGTTAAAGTGAAGTGAATGACAAGCAGAGCATGTTGAGTAGCAATGTCgaactgagcatgtgcaagACTTTCAAGACGAAGGCAGAATAGTGTTTAGTCAGCAGAGGGCGCTGTTGAATAACAGTGGCACTATATGAATATAGAGTCGTTAAGTAGTAAATGGTTTTAGATATGGGCCATTCTTCACATATTGTAAACATGCATGAAGGCTAAATTAGTACTGAGATTATATTGCATACGCTCTTGACAAGGGGGTGAAAGTCAAAAAATATTGAGAAAATgtgcagaaataaaaacaaacttcaGTGTTGTAGGTGTGTATCATCTGGAAATATTTAAAATGGaattaattaaatgaaaatgaacattGAATATGTGACAACATGAATAGAAGAGGTGCAGATACATGTGCATGTGATCAAACTAGCTGAACAAGAGGCCAAAATGAAGAAAATTAACATCACAGTCATAGATATGGAGAAGAATGAAGCAAATCAATTCAACTGCAGTGTGACACTTGCACAATAAAGTGTAAATCAACACtttttaagacaaaataaaaaacaaaatactcaTTAAGTATGTACAAACTAAGTAGAAAAGCTTGCAGAAGGAATTACAGAGaacatgtaaacaaaaagaGTAATTAAGATAGCATAACACATTTGATAACTTTTAAaatcctttgttttgttttcatgtttggATCACTCATCGAGGCAGGCATAGCTACAGGTCACTGTCAAACCATGAAAGACTACACTTAATGTTACTGTAGCTTACCCTGTTCTAAAAGGAGTCTGAGAGAGAGGGAATTACATTAAGCAGAAAGATTTTGATCTTAATTTAAAAAGTCTTATGACCCTCCACCAGTGGTTTCCATTCCTACCTCACTGAGAGGAGGCAAGTTAGCTGGATCCTCTTTGATTTCCATCCTCAGGCTGCTGCGGGATGACACTCCATCTTGTTGTAGAAATACAAGTTGCTGTGATTCATGGGACACAAAGAGCAAGCATCATGGGAGCTGGGAGTGGAACCCTGAGTGCAGATGTTGGAGGCTGGAGCAGTAGTATTTTGCAGAATGCAGTCTTCACTAGCCCTCCTCATTCCCTTCTTCATTCCCCGGATATTTAACCAGCTGGATAAGGGTTTGATTTTCAGGCATTTTTCTTCCAGTTAGGCTACTGAAGGGAGTTTGGGTTTGGACTTGGCAGAGACGAGGAGACACCACCTGTAGGGATGAAGGGCACCAACCTGAGGAGGGTCTGCCAGAAGTACGCAGACAAACAGCGCTACGCCACGTTGTATGACAGCAGTCGGCACCTCCCCCTCTACTCAGCCTACATCTTTAAGAAGTCTGATGGGAAGAGGAGGATGGACACACCATGGATGTATGAGCCACAGTTGGTTTCTGATGATGAGAGTGGCAACATGAGAGCCCTTCCCCTTACTGAAGACACCCCCCCTCTGATTGAAGACAGCCAGGCCGTGTTGGAGGACTACACAGATGCTGTAGAATATAGACGTGGCCCACTGAATCCTGACctgcaccaatcacagccaGATGACAAATCCTCCACATATACTCTGACTAATGTAGTCCCATTAATCACAAACTTCCTGGACGCTTCCTGGAACCCATACATGGACATCATCCGCCGCCGCCTCAACAACTTCTGCCACGGCACATCTTTCATGGTGACAGGGGTGACCGTTTCTGGGGGGACCCTCAAACGAGATAACAAGGACCGACTCGCAATCCCAAAACACCTCTGGCTGGCTTACTGCTGCCCGCGGTTTGACCATAACTCTCCGTATGAGGTGAGGTTCATGTTCCCAAGTTATGGGGGCTATGCACTGAATGAACAGACTGACAACAGCGTGGTGGAAGTCCCTCTAAAGACTCTGGAGATTTTCCTGAAGAGCCAGTCAGACATAGACAGTGACCTGACTATTTTCTACAAGGGGTGTGTGTCAGAAAACAGCTTCAGGAAGAAGAGAGACCCGACCAGTGTTTCAGTATCAGGGGACAATCCTGAACGGGATGAACATGGATAAAGTATACCTATAAACAGAACTAGCTTGGATAAACTTGAATAGAAGCAGTGTTAGGTAGTCCTGGCTTTacgtgttttaaaaaaaaatttaattggaATTATATTAAGAAGGGAAAGGGCTCTTCATTTTGCCTTAGACAGGGCAAATTTAGATTCAGATTATAGCTCTCTATCAGTAGTAGTATGTGAGAAGGGGCTGTAGTACACATGACCAATAAGCACCACCAAAGGAAATAATGTGTAAATGCACATTAAAAGGTGAAAACTAGTATCACACTCCCATAAAGTCGGGGGCTTTACAAGACACTGATTATAAAAAattattatcaaaatcaaagcagcagagCCTGAGGTATCCTGACTTTACTGTCAAATATCAGCCAAGGCCCCAGGACTtagatcctacatttcccatcatGCAATGCAACTGTATGGCATGTGTATTTCAAAGAGAAGAAAGTCCACTTGTAGGCTATACTAAATCAGTTTAGGCATTAGTCCAAGAAATGGGTTTATACTACAGGCCTATATATGGCAGTGCTGAACAAATGAAGCGTCAATGCTTCAATATTTTGCAAACTAATCTTATCTTATGAAACGGTCTATGAGaaatatgttataaaaaaggtgctaaaacatacaaaaaagtgCACAAACAGGCCAGAGCTAAAGCTGTAAAAATGTCTTTATAAGGAGTGTAGCTTATATAGTGACTTAATGTTTTTACTGtggatatgatttttttttttttttgatgattttttggggcattttaggcctttat

Function

NR:

description
PREDICTED: endonuclease domain-containing 1 protein-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821447.1 False 2240 mRNA 0.44 2 9770280 9773340
XM_039821448.1 True 3207 mRNA 0.41 3 9770280 9776347

Neighbor

gene id symbol gene type direction distance location
LOC120573658 LOC103360465,LOC108242867 coding downstream 2373 9766267 ~ 9767907 (-)
si:dkey-85k7.10 LOC103360461,LOC104946296,LOC103480570,LOC107084109,LOC106963058 coding downstream 4669 9763672 ~ 9765611 (-)
LOC120573654 NA coding downstream 8652 9758545 ~ 9761628 (-)
epoa epo coding downstream 20730 9741854 ~ 9749550 (-)
LOC120573625 NA coding downstream 34921 9725297 ~ 9735359 (-)
tdrd7b LOC103364796,LOC104955570 coding upstream 765853 10542200 ~ 10565191 (-)
fam113 LOC101467090 coding upstream 803162 10579509 ~ 10590117 (-)
rpgrip1 LOC103146607,LOC106933061,LOC103480551,LOC107099025 coding upstream 814651 10590998 ~ 10602496 (-)
btr33 LOC104955567,LOC103364808 coding upstream 826395 10602742 ~ 10607423 (-)
syt4 syt4 coding upstream 899093 10675440 ~ 10697392 (-)
G142258 NA non-coding downstream 312866 9456894 ~ 9457414 (-)
G142255 NA non-coding downstream 318355 9451033 ~ 9451925 (-)
G142251 NA non-coding downstream 349277 9420540 ~ 9421003 (-)
G142250 NA non-coding downstream 351978 9416837 ~ 9418302 (-)
G142228 NA non-coding downstream 433424 9336576 ~ 9336856 (-)
G142302 NA non-coding upstream 21984 9798331 ~ 9809775 (-)
G142342 NA non-coding upstream 134353 9910700 ~ 9912909 (-)
LOC120572688 NA non-coding upstream 362040 10138387 ~ 10158142 (-)
LOC120573244 kdm6b,tmem88,LOC107664277,LOC106608825,LOC106577775,LOC104964151,LOC103375639,LOC103146602,LOC102237254 non-coding upstream 698890 10475237 ~ 10523791 (-)
LOC120573725 NA non-coding upstream 750040 10526387 ~ 10526550 (-)
tmem256 tmem256,LOC103358394 other downstream 304501 9457850 ~ 9465779 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 616347 9130643 ~ 9153933 (-)
LOC120572236 LOC102083041 other downstream 665049 9032947 ~ 9105231 (-)
G142173 NA other downstream 669866 9098741 ~ 9100414 (-)
LOC120572366 NA other downstream 1226548 8517023 ~ 8543732 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 855128 10631475 ~ 10657973 (-)
G142669 NA other upstream 1153675 10930022 ~ 11144738 (-)
gpha2 gpha2 other upstream 1373504 11149851 ~ 11154529 (-)
G142745 NA other upstream 1665614 11441961 ~ 11443939 (-)
prox3 LOC104947722,LOC103363229 other upstream 1678668 11455015 ~ 11467019 (-)

Expression


Co-expression Network