LOC120573391 (LOC106532721,LOC108250468)


Basic Information

Item Value
gene id LOC120573391
gene name LOC106532721,LOC108250468
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38475763 ~ 38487369 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823104.1
tcctggccGTGAACCACGTGTCTCTGGAGGACATCCTCCATGAAGATGCCGTGGTGGCGCTGAAGAACACGGGCGAGGTGGTGTACCTGAAGGTGGCGGCACCCACCACGCAGTACATGCACCCAGCAGACCGCTACAGCCCCCCCGACCTCACCAgctCCTACATGGAGCCGGACTACATGTGCGATTACCCACAAGCCCTCGGTCCTCCGTCTCCACGGCGATACTCCCCTATCCCCCGCGGCATGATGGGAGAGGACGATTACTCCCGGGAGCCGCGGCGCGTCTGCGTCCAGCGTGGCTCCACCGGGCTGGGATTCAACATCGTCGGAGGAGAAGACGGCGAAGGAATCTTCATCTCCTTCATCCTCGCCGGGGGACCGGCAGACCTCAGCGGGGAGCTGCGCAAGGGGGACCAGATCCTCAGCgtTAATGGTGTGGATCTCCGGTATGCGACACATGAACAGGCGGCAGCAGCTCTGAAGAACGCCGGACAGATGGTGACCATCGTGGCTCAGTACAGACCTGAAGAGTACAGTCGCTTCGAAGCAAAGATCCACGACCTGAGAGAGCAGATGATGAACAACTCGTCTGGAAGTCTGAGAGCCAACCGCAGCTTCTACCTCAGGGCGCTGTTTGACTACGATAAGCAGTGGGACTGTGGCGTCCTCTCACAGGCTCTGGACTTTAACTTTGGCGAGGTTCTTCATGTGATGGACAGCAGCGACGACGAGTGGTGGCAGGCCAGACGGGTGAACCAGCAGGGCGAGATGGAGGAACTGGGATACATCCCGTCCAAACACAGAGTGGAGAGGAAAGAGTGGTCACGCATGAAGGGGAAAGGTCGAGAAGGGTTCGTTCACAGCTATGAGCTCGTCACTCAGATTGAAGTGGACTACGCTCGTCCTGTCATCATCCTGGGACCGACCAAAGACCGAGTCAACGACGACCTGCTGTCTGACTTCCCGGACAAGTTCGGCTCCTGCGTGCCTCaCACGACTCGCCCTCAGAGGGACTACGAGGCCGACGGGCGGGACTACCACTTTGTGTCGTCACGGGAACAGATGGAGCGGGACATCCAGTCGCACCGCTTCATCGAGGCGGGGCAGTACAACAACCACCTGTACGGGACGTCGGTGCAGAGCGTCCGACAGGTGGCCGAGCAGgGGAAGCACTGCATCCTGGACGTGTCGGCCAATGCTGTGAGGAGGCTGCAGGCCGCTCAGCTTCAACCCATCGCCATCTTCATCCGACCACGATCCCTGGAGAACATCCTggatctGAATAAGCGTCTGTCGGAGGATCAGGCGAGGAAAGCTCTGGACCGAGCCATCAAACTGGAACAAGACTTCCTCGAGTGTTTCACGGccatCGTGCATGGCGACAGCTTCGAGGAGGTCTACCATCTGGTCAAAGCCGTCATAGAGGAGCAGAGTGGCCCGTACATCTGGGTTCCCGCTCGCGACAGGCTCTGATTGGACGCACTGCCAACGACGGGTGCCGTCTCCATGGAGACTGCCGTCGTGACCTGACGGtttcttatttttctttctaCGGGGTGAAGACGAGCAACGTGGTGATTGGACGGATGCTGTCGAACTAAGAAAGATGTTTTGATGATTGATCAGTGAATAATGAATCAGGACTGTAGAGTTCAGTTGGTATTGAAGTATTTATAAtatcctatttatttatttatttatctatttatttatttatttacgtgATGtgaaaatggtgtgtgtgtgcttgagtgtgtgtgcgtgtgtttgtgtgtagtgtaCATAAAGACTTGTGTGACTGTAAATAAAACGATGGGGCTCAAACA
>XM_039823105.1
GGACACATCTGGAAACATACTCAGATATCGGAGAAAACAAGGGGGACCAGATCCTCAGCGTGAGTACCCATACACATCTGGACACATCTGGAAACATACTCAGATATCAGAGAAAACAAGGGGGACCAGATCCTCAGCGTGAGTACCCATACACATCTGGACACATCTGGAAACATACTCAGATATCAGAGAAAACAAGGGGGACCAGGTCCTCAGCGTGAGTACCCATACACATCTGGACACATCTGGAAACATACTCAGATACCACAGAAAACAAGGGGGACCAGATCCTCAGCgtTAATGGTGTGGATCTCCGGTATGCGACACATGAACAGGCGGCAGCAGCTCTGAAGAACGCCGGACAGATGGTGACCATCGTGGCTCAGTACAGACCTGAAGAGTACAGTCGCTTCGAAGCAAAGATCCACGACCTGAGAGAGCAGATGATGAACAACTCGTCTGGAAGTCTGAGAGCCAACCGCAGCTTCTACCTCAGGGCGCTGTTTGACTACGATAAGCAGTGGGACTGTGGCGTCCTCTCACAGGCTCTGGACTTTAACTTTGGCGAGGTTCTTCATGTGATGGACAGCAGCGACGACGAGTGGTGGCAGGCCAGACGGGTGAACCAGCAGGGCGAGATGGAGGAACTGGGATACATCCCGTCCAAACACAGAGTGGAGAGGAAAGAGTGGTCACGCATGAAGGGGAAAGGTCGAGAAGGGTTCGTTCACAGCTATGAGCTCGTCACTCAGATTGAAGTGGACTACGCTCGTCCTGTCATCATCCTGGGACCGACCAAAGACCGAGTCAACGACGACCTGCTGTCTGACTTCCCGGACAAGTTCGGCTCCTGCGTGCCTCaCACGACTCGCCCTCAGAGGGACTACGAGGCCGACGGGCGGGACTACCACTTTGTGTCGTCACGGGAACAGATGGAGCGGGACATCCAGTCGCACCGCTTCATCGAGGCGGGGCAGTACAACAACCACCTGTACGGGACGTCGGTGCAGAGCGTCCGACAGGTGGCCGAGCAGgGGAAGCACTGCATCCTGGACGTGTCGGCCAATGCTGTGAGGAGGCTGCAGGCCGCTCAGCTTCAACCCATCGCCATCTTCATCCGACCACGATCCCTGGAGAACATCCTggatctGAATAAGCGTCTGTCGGAGGATCAGGCGAGGAAAGCTCTGGACCGAGCCATCAAACTGGAACAAGACTTCCTCGAGTGTTTCACGGccatCGTGCATGGCGACAGCTTCGAGGAGGTCTACCATCTGGTCAAAGCCGTCATAGAGGAGCAGAGTGGCCCGTACATCTGGGTTCCCGCTCGCGACAGGCTCTGATTGGACGCACTGCCAACGACGGGTGCCGTCTCCATGGAGACTGCCGTCGTGACCTGACGGtttcttatttttctttctaCGGGGTGAAGACGAGCAACGTGGTGATTGGACGGATGCTGTCGAACTAAGAAAGATGTTTTGATGATTGATCAGTGAATAATGAATCAGGACTGTAGAGTTCAGTTGGTATTGAAGTATTTATAAtatcctatttatttatttatttatctatttatttatttatttacgtgATGtgaaaatggtgtgtgtgtgcttgagtgtgtgtgcgtgtgtttgtgtgtagtgtaCATAAAGACTTGTGTGACTGTAAATAAAACGATGGGGCTCAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823104.1 True 1828 mRNA 0.56 13 38475763 38487369
XM_039823105.1 False 1696 mRNA 0.52 11 38475763 38485653

Neighbor

gene id symbol gene type direction distance location
LOC120573402 NA coding downstream 137004 38285892 ~ 38338759 (-)
LOC120573407 NA coding downstream 273419 38199809 ~ 38202344 (-)
LOC120573396 NA coding downstream 443661 38027935 ~ 38032102 (-)
LOC120573400 NA coding downstream 465188 38007345 ~ 38010575 (-)
LOC120573408 NA coding downstream 475672 37993777 ~ 38000091 (-)
LOC120573401 NA coding upstream 74593 38561962 ~ 38565649 (-)
LOC120572654 rbm46,LOC102795526 coding upstream 118920 38606289 ~ 38627304 (-)
LOC120572225 LOC104940940 coding upstream 247815 38735184 ~ 38743390 (-)
cfi NA coding upstream 306193 38793562 ~ 38816682 (-)
LOC120572318 LOC103365258,LOC100696033,LOC101477093,LOC102302035 coding upstream 341191 38828560 ~ 38866782 (-)
G150057 NA non-coding downstream 18169 38455011 ~ 38457594 (-)
LOC120573412 NA non-coding downstream 84099 38388610 ~ 38391664 (-)
G149996 NA non-coding downstream 118727 38352481 ~ 38357036 (-)
G150029 NA non-coding downstream 127792 38347565 ~ 38347971 (-)
G150021 NA non-coding downstream 152652 38322571 ~ 38323111 (-)
LOC120573413 NA non-coding upstream 4578 38491947 ~ 38493628 (-)
G150170 NA non-coding upstream 10296 38497665 ~ 38501382 (-)
G150169 NA non-coding upstream 62603 38549972 ~ 38570686 (-)
G150196 NA non-coding upstream 124878 38612247 ~ 38613055 (-)
G150202 NA non-coding upstream 191736 38679105 ~ 38679480 (-)
G150012 NA other downstream 197516 38246640 ~ 38278247 (-)
LOC120573395 NA other downstream 296283 38155598 ~ 38179480 (-)
LOC120572652 NA other downstream 512015 37960642 ~ 37963748 (-)
G149973 NA other downstream 576236 37844163 ~ 37899527 (-)
G149826 NA other downstream 872943 37600942 ~ 37602820 (-)
G150174 NA other upstream 41548 38528917 ~ 38533300 (-)
LOC120572655 NA other upstream 73900 38561269 ~ 38635593 (-)
G150192 NA other upstream 124286 38611655 ~ 38689593 (-)
lratb.1 LOC101070953,LOC108248302,LOC106910222,LOC103149051,LOC103367949,LOC106949946,LOC107082284 other upstream 157197 38644566 ~ 38671813 (-)

Expression


Co-expression Network