LOC120573516


Basic Information

Item Value
gene id LOC120573516
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28927342 ~ 28930638 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823295.1
tcattcggaaaaacgtttttctgatgtccatgaacgcacagTCTGTGCAGTTAGCCTGCTCCCAACCAGGGCAGTGGTACTGTACACATCCTTGGCATTTGACTCATGACTCAAATCTCCAGAGATAACAATGAAGGCATTGGGCTTCTGCGTCTGAAGATTTGAGACAGTGTTGTGGATGACGTCAGCAGCTGCCTTCATATCAACAGATCATGGAATGTAAACAACGGTCACTATGGCGGacgtggggtgggggggggcatggatgtattaagataGGAGCAAAGTGTGTCTGCTCGGCACAGACAGCCAGGTCGCCTCTTTGATCGAACTGCAGCGGTgcatactggagagaaactgAAACTAGCGAAGACAGCCAGGTCGCCTCTTTGATTGAACTGCAGCGGTgcatactggagagaaactgAAACTAGCGATCTCATCAATGTTGGTATtgatattattgatatttggaTCGATCTGCCCACCACAAGTTCTCAGGCGAAAATTTAAAGATTTGCCGACAGCCACATCAAAAATGGCAGCAGGTACAAGCTATAGAAAAAGAGCCACAATGGAGTTGGTCCTGAAATCCGCCTACCAAATAAAACTGAGgTCGGCAAATCAGCTGTTTGGTCTAATTAGTTGCAAACAATGTGAAGGGGAAACAGGTTCAGAATACCTGAAAGGGGTGTTAGGCTTTGTGTCCAAAACCAGACACAAGACTTTCAACTTGAAGAATCCAGCTGGTGCTACATGGAAGATAGGAGACCTGGGCGATACTATTTATAGTGGGGAAGATTACGAGGTAAATGGTTGGGGAAAGTTTTACCTTCCCGAGAAAGTAAATATGCAGGTTGTAGGTGTAGTGAAGGGGATCTCGTGCCCGTGTGACCAGCTCGTTGTGATGACCTGCTGTGAGGACAGACAGGTGTATGCCTACGATGGAGAGAAGCTGCATCTGGTAGCTTCAAACCTGCAGCAGCTAATGGATGAGGGAATAAAGTACCCAGGGTCCAGGAGCTATTACAATGGGGAGGCCTTCAAAGATATGACAGATGAGGACTGGGACAAAGTGAACAAGAGGCTGGACCAAGAACACCATGAACTGGTGATgtcaaaaaaaactgaattccTTAAGAATCTCAAATCAATCAAAGACAACCTAGGGAAGCCAGAGAtccttcagcagcagactgctcCACCCTCAGAAGAAGGAGCGCTACCGCAGGTccttcattccagcagcagtcagactctttaatgcaacatcataatgtagcactgTTAGCTGTTTCTGCAATATGAGCATCACTCGACTATATTCTGCACTATacatattaatttatttatttattactctcTGTTACTTTCGATA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823295.1 True 1378 mRNA 0.46 6 28927342 28930638

Neighbor

gene id symbol gene type direction distance location
LOC120573484 LOC103371991,LOC100698793,LOC102798587,LOC101487164 coding upstream 170657 28741993 ~ 28756685 (+)
LOC120572585 NA coding upstream 216282 28706623 ~ 28711060 (+)
LOC120572584 NA coding upstream 223195 28683021 ~ 28704147 (+)
LOC120572212 NA coding upstream 256521 28662620 ~ 28670821 (+)
LOC120572291 NA coding upstream 313799 28612776 ~ 28613543 (+)
LOC120572238 NA coding downstream 142172 29072810 ~ 29077484 (+)
LOC120572237 NA coding downstream 149575 29080213 ~ 29090950 (+)
LOC120572882 NA coding downstream 243705 29174343 ~ 29236780 (+)
LOC120572868 NA coding downstream 263172 29193810 ~ 29202524 (+)
LOC120572873 NA coding downstream 323443 29254081 ~ 29260458 (+)
G147007 NA non-coding upstream 24003 28891335 ~ 28903339 (+)
G146996 NA non-coding upstream 72489 28849421 ~ 28854853 (+)
G146986 NA non-coding upstream 148347 28724210 ~ 28778995 (+)
G146989 NA non-coding upstream 164289 28759641 ~ 28763053 (+)
G146755 NA non-coding upstream 352899 28551799 ~ 28574443 (+)
G147017 NA non-coding downstream 6428 28937066 ~ 28941715 (+)
G147042 NA non-coding downstream 165632 29096270 ~ 29096600 (+)
G147129 NA non-coding downstream 242916 29173554 ~ 29173851 (+)
LOC120573012 NA non-coding downstream 277773 29208411 ~ 29235418 (+)
G147198 NA non-coding downstream 360812 29291450 ~ 29426726 (+)
tec tec other upstream 275796 28617865 ~ 28651546 (+)
G146753 NA other upstream 342275 28555552 ~ 28585067 (+)
G146744 LOC103480850,LOC103151628 other upstream 508230 28331156 ~ 28419112 (+)
G147035 NA other downstream 98844 29029482 ~ 29065509 (+)
G147192 NA other downstream 338776 29269414 ~ 29480487 (+)
LOC120572956 NA other downstream 483625 29414263 ~ 29421799 (+)
G147303 NA other downstream 642789 29573427 ~ 29618152 (+)
clrn1 clrn1,LOC102780584 other downstream 744675 29675313 ~ 29690845 (+)

Expression


Co-expression Network