LOC120573484 (LOC103371991,LOC100698793,LOC102798587,LOC101487164)


Basic Information

Item Value
gene id LOC120573484
gene name LOC103371991,LOC100698793,LOC102798587,LOC101487164
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 28741993 ~ 28756685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823236.1
ATGACTCTTTCAGAGATGTCGTGGCGCTCGTCTTTCCGCTGCTCGAAGTTTCGTCACATTTTCGGGAAGCCGTCCACGAAGGAGCACAGCTACGACGGGGTGCCAATCACACGCAGCGTCCACGACAACCACTACTGCTCGGCCAATCCTTGCTTCATCGCCGTGGTGACAGAGTGCGCCGGGGGCGGGTCCTTTTTAGTCCTGCCCATCCATCACACGGGCAGGGTGGACCCTCAGCACCCGAGGGTGTGCGGTCACAGTGGGAGCGTCCTGGATGTCAAGTGGAACCCGTTTGATGATCACTGCATCGCCTCGTGCTCAGAGGACTGCACTGTGAAGGTCTGGGACATCCCGGTCTGTGGCGTCCAACAGAACCTCACCAAGGCCAGGAAGACTCTGATTGGTCACTGCAGGAGGGTGGCGCTTATTGAGTGGCATCCGACAGCTGAGAACCTGCTGCTTAGCGCCGCCTACGACTACAAGGTCCTCCTCTGGGATGTGTCCCAGGTAGGTGCGGTGATTAGGTACCCGGTGCGGGTGGTTCTGATGCCCGTCCACCACCGCTACCCGTCTGACTCGCTGCTGCTGTCCGTCAGCTTCAACAGCGATGGAAGCAGGCTGGCAGTCACATCCAAAGACAGACGGGTTCGAGTCCTGGACCCGCGGACAGGAAGAATCCTACAAGTGTCGAACAGTAAGTCCCACAGAGCCAATAAGGTTTTATACATCGGAGGGTTGAAGATGCTTGTGTCCACCGGCAGCTCACCCTGGAACCACAGACAGATCGTCCTCTGGGACCCTGACGACTTATCTGAGCCTCTGTATGAAGAAGAGTTGGACGGATCTGCAGGAGTCCTCTTCCCATTCTACGATCCAGACACACAGATGCTCTACTTGGCTGGAAAGGGTGATGGGAACATCCGTTACTACGAGCTGAGCACTGAGAAACCTTACATCAGCTTCCTGACGGAGTACAGGTCTCTGCTGCCACAGAAAGGACTCGCGGTGATGCCAAAGCGCGGCCTGGACGTGAGCGCCTGTGAGGTTTTCCGATTTTACCGTCTGATCGCCTTTAAAGACCTGGTGGAACCACTGTCAATGATCGTACCACGAAAAGAGTCAGGTGTTTTCCAAGAGGATCTTTACCCAATGACAGCTGGGAACCAGGCAGCCATGACGGCTCAAGAGTGGCTGTTAGGGATCAACAGAAGCCCGGTGCTGATGTCCCTGAGGCCCGGGACTTTAATAGCCAACCCTTACCCAGAAACCCCTGCTGAGAAGGGGCTAGTGAGGCAGCTGAGCTCCCTGAGGTTCCAGATGGATCCGTCAGTCGGTGCCGTGACCAAGGCCCGCCTGGAGTTTATGGAAGAGGACTTCCTTGAGGAGCAGCTAGCCTACCAGGACGCCAAATACCCCAGGGAGGTGAGCGACCTGTCGGGGTGGCAGCCGGACGAGACCCAGATCCCGCTGTGGACGTACTGCTGCACTCCACACTGTTGTGAACCTGCAGAGAGGCCTCCGCCTACAACCGAGAGCGAGCTCCTGCGAGCGTTTTACAAACAGCAAGACGAGATCAAAGGCCTGAGAGAACAACTTAAAGACAAAGACGTGAGGATCGCTCAGCTGGAGCTGGACATCAAAAACACCAGAAACAACATGAGGGCGGCCTTCTGA

Function

NR:

description
PREDICTED: coronin-2B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823236.1 True 1674 mRNA 0.57 14 28741993 28756685

Neighbor

gene id symbol gene type direction distance location
LOC120572585 NA coding upstream 30933 28706623 ~ 28711060 (+)
LOC120572584 NA coding upstream 37846 28683021 ~ 28704147 (+)
LOC120572212 NA coding upstream 71172 28662620 ~ 28670821 (+)
LOC120572291 NA coding upstream 128450 28612776 ~ 28613543 (+)
LOC120572276 cdkl2,LOC103363889,LOC102296890,LOC105921304 coding upstream 274872 28451993 ~ 28467121 (+)
LOC120573516 NA coding downstream 170657 28927342 ~ 28930638 (+)
LOC120572238 NA coding downstream 316125 29072810 ~ 29077484 (+)
LOC120572237 NA coding downstream 323528 29080213 ~ 29090950 (+)
LOC120572882 NA coding downstream 417658 29174343 ~ 29236780 (+)
LOC120572868 NA coding downstream 437125 29193810 ~ 29202524 (+)
G146755 NA non-coding upstream 167550 28551799 ~ 28574443 (+)
LOC120572290 NA non-coding upstream 193299 28539345 ~ 28548694 (+)
G146783 NA non-coding upstream 197044 28544240 ~ 28544949 (+)
G146778 NA non-coding upstream 212825 28520927 ~ 28529168 (+)
G146989 NA non-coding downstream 2956 28759641 ~ 28763053 (+)
G146996 NA non-coding downstream 92736 28849421 ~ 28854853 (+)
G147007 NA non-coding downstream 134650 28891335 ~ 28903339 (+)
G147017 NA non-coding downstream 180381 28937066 ~ 28941715 (+)
G147042 NA non-coding downstream 339585 29096270 ~ 29096600 (+)
tec tec other upstream 90447 28617865 ~ 28651546 (+)
G146753 NA other upstream 156926 28555552 ~ 28585067 (+)
G146744 LOC103480850,LOC103151628 other upstream 322881 28331156 ~ 28419112 (+)
G147035 NA other downstream 272797 29029482 ~ 29065509 (+)
G147192 NA other downstream 512729 29269414 ~ 29480487 (+)
LOC120572956 NA other downstream 657578 29414263 ~ 29421799 (+)
G147303 NA other downstream 816742 29573427 ~ 29618152 (+)
clrn1 clrn1,LOC102780584 other downstream 918628 29675313 ~ 29690845 (+)

Expression


Co-expression Network