Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120572354 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 6648784 ~ 6655885 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005641427.1 | False | 483 | lncRNA | 0.45 | 4 | 6648784 | 6655879 |
| XR_005641428.1 | True | 486 | lncRNA | 0.44 | 4 | 6648784 | 6655885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rela | rela | coding | upstream | 82217 | 6549081 ~ 6566567 (+) |
| LOC120572493 | LOC103366238 | coding | upstream | 112908 | 6492379 ~ 6535876 (+) |
| mpdu1b | mpdu1 | coding | upstream | 360553 | 6280432 ~ 6288231 (+) |
| LOC120573493 | NA | coding | upstream | 371443 | 6267364 ~ 6277341 (+) |
| mblac1 | mblac1 | coding | upstream | 388781 | 6256293 ~ 6260003 (+) |
| alpk1 | LOC102787108 | coding | downstream | 1048962 | 7704847 ~ 7715407 (+) |
| LOC120572296 | NA | coding | downstream | 1066324 | 7722209 ~ 7724614 (+) |
| fxr2 | fxr2 | coding | downstream | 1314132 | 7970017 ~ 7985215 (+) |
| LOC120573420 | LOC104946620,LOC103361161 | coding | downstream | 1349888 | 8005773 ~ 8009869 (+) |
| LOC120572361 | NA | coding | downstream | 1363351 | 8019236 ~ 8020881 (+) |
| G141659 | NA | non-coding | upstream | 3569 | 6558298 ~ 6645215 (+) |
| G141661 | NA | non-coding | upstream | 73613 | 6574848 ~ 6575171 (+) |
| G141660 | drap1,LOC105923970,LOC107714888 | non-coding | upstream | 78066 | 6568309 ~ 6570718 (+) |
| G141652 | LOC104965782,LOC102208922,LOC107376753,LOC101158483,LOC102786212 | non-coding | upstream | 125159 | 6514814 ~ 6523625 (+) |
| G141650 | NA | non-coding | upstream | 165632 | 6471771 ~ 6483152 (+) |
| G141703 | NA | non-coding | downstream | 43413 | 6699298 ~ 6705104 (+) |
| LOC120572353 | NA | non-coding | downstream | 172942 | 6828827 ~ 6831376 (+) |
| LOC120573369 | NA | non-coding | downstream | 822613 | 7478498 ~ 7497332 (+) |
| G141772 | NA | non-coding | downstream | 862448 | 7518333 ~ 7518703 (+) |
| G141780 | NA | non-coding | downstream | 902821 | 7558706 ~ 7559187 (+) |
| LOC120573071 | map3k11 | other | upstream | 8539 | 6588951 ~ 6640245 (+) |
| drap1 | drap1 | other | upstream | 70027 | 6571721 ~ 6578757 (+) |
| trnaw-cca_15 | NA | other | upstream | 411710 | 6237003 ~ 6237074 (+) |
| G141063 | NA | other | upstream | 2161177 | 4483692 ~ 4487607 (+) |
| G141060 | men1 | other | upstream | 2203837 | 4440638 ~ 4444947 (+) |
| LOC120573538 | NA | other | downstream | 1060719 | 7716604 ~ 7721656 (+) |
| LOC120572330 | LOC107104736,LOC106920517,LOC103140598,LOC106947113 | other | downstream | 1334313 | 7990198 ~ 7997708 (+) |
| LOC120572385 | NA | other | downstream | 1401770 | 8057655 ~ 8060478 (+) |
| LOC120573547 | NA | other | downstream | 1734930 | 8390815 ~ 8400539 (+) |
| LOC120573548 | NA | other | downstream | 1756794 | 8412679 ~ 8413334 (+) |
