LOC120573028


Basic Information

Item Value
gene id LOC120573028
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 30177557 ~ 30179036 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641602.1
TCCACCCACTTTTAAACATTTGATTAAATAGCAAAGCCTCAAACTAAAACTCACGGACAAGAGACGGCAATGGATCAAGACTCTCTCAGCTCTCATGGCTCCATTTCTGCTCCTGTTGCTCATTCTGTCTGAAGCAGCTCCTGTGTTGTACAGTGGAGCAGACGTGACCTGGAGCTGCCAGAGTACGTCCTCTTTTACAGCGATGGACACTTGGATGCAACCCAGCATTCATCCTTTAAGGACAGGGTGGACCTGTTGGACAGAGATCTGAAGGACGGAAATGTGTCTTTAATTCTGAAGAATGTGAGCAGACACAACGCTGGAAAATACGAGTGTCAAGTTGCATCAGCTGGTTCATTCGAgtcaGGAGAGCGCACACTCCAAGGATGAAAACTCAATGAATGCTGTCCCTGAGGATGTAAACTCCTCTTCTGATAATTTGTATTGGCAGCAGGTGGACTGCTTCTTTGTAGCTGCTGCAGCGGATGGTGTCCTGACATATAAAAGACGTGAGGACAAGAGATCGGGACAACATGCTGCTGATGATGATAAAGTATTGGCTGTTCAGTTCATCTGACAACTCAcagaccagaggcctgtactacgaggcaagatttggcgttaacgaggtaacttcaggttcaactcTGGGATTTCTGTATCTtgacggtggatcacttgttaccaaGTTAAATCACCGTGGTAACCTATGCTGTATACctaacctggtcaggagcaggttatgttggagattagagaccaacaggtgttaaagcaccgcctactgaccaatcaacaCTCAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641602.1 True 807 lncRNA 0.46 3 30177557 30179036

Neighbor

gene id symbol gene type direction distance location
LOC120572780 NA coding upstream 4892 30157980 ~ 30172665 (+)
LOC120572769 LOC101480196,LOC103389327 coding upstream 23017 30130332 ~ 30154540 (+)
LOC120572819 NA coding upstream 224150 29939194 ~ 29953407 (+)
LOC120572923 NA coding upstream 224632 29951149 ~ 29952925 (+)
LOC120572883 NA coding upstream 243459 29911422 ~ 29934098 (+)
LOC120572877 NA coding downstream 108253 30287289 ~ 30291890 (+)
LOC120572855 NA coding downstream 439980 30619016 ~ 30625059 (+)
LOC120572903 NA coding downstream 514255 30693291 ~ 30696500 (+)
LOC120572809 NA coding downstream 522221 30701257 ~ 30708322 (+)
LOC120572602 NA coding downstream 572196 30751232 ~ 30754016 (+)
G147403 NA non-coding upstream 55755 30061685 ~ 30121802 (+)
G147409 NA non-coding upstream 59735 30074642 ~ 30117822 (+)
G147414 NA non-coding upstream 69545 30105626 ~ 30108012 (+)
G147402 NA non-coding upstream 98632 30078499 ~ 30078925 (+)
G147408 NA non-coding upstream 102261 30073742 ~ 30075296 (+)
LOC120573025 NA non-coding downstream 65439 30244475 ~ 30248058 (+)
G147436 NA non-coding downstream 87337 30266373 ~ 30356296 (+)
LOC120573039 NA non-coding downstream 91565 30270601 ~ 30272022 (+)
LOC120573054 NA non-coding downstream 233951 30412987 ~ 30415794 (+)
G147462 NA non-coding downstream 272600 30451636 ~ 30453822 (+)
atp6v1g1 atp6v1g1,LOC103369321,LOC101172700,LOC106512071 other upstream 118396 30056585 ~ 30059161 (+)
prpf4 prpf4,LOC102784297 other upstream 123852 30035573 ~ 30053705 (+)
fer fer,LOC102300771,LOC102783831 other upstream 149676 30002376 ~ 30027881 (+)
G147371 NA other upstream 175056 29819999 ~ 30002501 (+)
LOC120572774 NA other downstream 11157 30190193 ~ 30214405 (+)
LOC120572833 NA other downstream 246553 30425589 ~ 30445428 (+)
G147478 NA other downstream 349856 30528892 ~ 30542509 (+)
LOC120572899 NA other downstream 555811 30734847 ~ 30768337 (+)
G147518 NA other downstream 691748 30870784 ~ 30872888 (+)

Expression


Co-expression Network