LOC120574377


Basic Information

Item Value
gene id LOC120574377
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9446883 ~ 9455662 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207917
tggacacacagtttaacatgatggactataggacaggactgctgcttttaactctttgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACATTCAGCAGCTACCGTAtgaactgggtcagacaggctcctggaaaaggactggagtggatcGCTTTTATACACACAGGCAGTTCTCATCTCTATTACTCCCAGTCAGTCCAGGGGAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAACtctatctgcagatgaacagtctgaagaccgAGGACACAGCAGTGTATTACTGTGCCCGAGAGACACAGTGAGAGACGATAATAGGAGAGTCAT
>unassigned_transcript_771
atgccgatcccaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACATTCAGCAGCTACCGTAtgaactgggtcagacaggctcctggaaaaggactggagtggatcGCTTTTATACACACAGGCAGTTCTCATCTCTATTACTCCCAGTCAGTCCAGGGGAGATTCACCATCTCCAGAGATGACTCCAGCAGTAAACtctatctgcagatgaacagtctgaagaccgAGGACACAGCAGTGTATTACTGTGCCCGAGAGACACAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207917 True 402 TUCP 0.47 2 9446883 9447372
unassigned_transcript_771 False 357 V_gene_segment 0.49 3 9446905 9455662

Neighbor

gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 10017 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 21837 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 26185 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 38401 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 40079 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 605624 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 711050 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 1153336 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 1217680 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1283246 10738908 ~ 10772253 (-)
G153527 NA non-coding downstream 87033 9359528 ~ 9359850 (-)
G153508 NA non-coding downstream 143536 9248397 ~ 9303347 (-)
G153509 NA non-coding downstream 181516 9258210 ~ 9265367 (-)
G153462 NA non-coding downstream 226980 9219599 ~ 9219903 (-)
G153455 NA non-coding downstream 243024 9196758 ~ 9203859 (-)
G153539 NA non-coding upstream 86456 9542118 ~ 9548305 (-)
G153481 NA non-coding upstream 147195 9602857 ~ 9603106 (-)
G153588 NA non-coding upstream 296597 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 323627 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 338430 9794092 ~ 9842982 (-)
LOC120574376 NA other downstream 3159 9443243 ~ 9443724 (-)
LOC120574607 NA other downstream 4086 9442247 ~ 9442797 (-)
LOC120574375 NA other downstream 5783 9440564 ~ 9441100 (-)
LOC120574374 NA other downstream 7390 9438974 ~ 9439493 (-)
G153473 NA other downstream 13882 9428183 ~ 9433001 (-)
LOC120574645 NA other upstream 1304 9456966 ~ 9457470 (-)
LOC120574378 NA other upstream 7929 9463591 ~ 9469202 (-)
LOC120574379 LOC106526304 other upstream 8938 9464600 ~ 9465189 (-)
LOC120574380 NA other upstream 11846 9467508 ~ 9467948 (-)
LOC120574601 NA other upstream 16153 9471815 ~ 9472365 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location