LOC120574660


Basic Information

Item Value
gene id LOC120574660
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9420152 ~ 9420698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_764
atggactataggacaggactgctgcttttaactttctgctgggcagGTGTTTACAGTCAGACTCTGACTGAGTCTGAACCAGTGGTAAAGTGCCCTGGAGAATCCCACAAACTGACCTGTACATATGCAGGAATAGCAGATGATAGCGCTCGTGTCGCTTGGATCAGACAAGCTGAaggaaaaggactggagtgggttGCCTACATTTCTGCTCCAAGTGGAGACACTAAAGCTTATTCAACGTCAGTCCAGAATCGCTTCACCATCTCCAGAGACAACAACGTGGACCAggtgtatctgcagatgaacagcctGACGACTGAAGactctgctgtttattattgtgctcgagaGCCACAGTGATACAGGAAGCCACAGAGCTGTACACAAACCACTGCAGATGTCACTGTGACAGTCACTGGTAGAAAGTGCTAGTTTA

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_764 True 439 V_gene_segment 0.48 2 9420152 9420698

Neighbor

gene id symbol gene type direction distance location
LOC120574369 NA coding downstream 11670 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 13348 9391565 ~ 9406804 (-)
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding downstream 372029 9043413 ~ 9048123 (-)
sez6l2 sez6l2 coding downstream 383324 9020086 ~ 9036828 (-)
kctd13 kctd13,LOC104945278 coding downstream 401412 9011223 ~ 9018740 (-)
LOC120574659 NA coding upstream 3811 9424509 ~ 9425046 (-)
LOC120574373 NA coding upstream 14594 9435292 ~ 9436866 (-)
cacna1aa NA coding upstream 640588 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 746014 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 1188300 10608998 ~ 10618057 (-)
G153527 NA non-coding downstream 60302 9359528 ~ 9359850 (-)
G153508 NA non-coding downstream 116805 9248397 ~ 9303347 (-)
G153509 NA non-coding downstream 154785 9258210 ~ 9265367 (-)
G153462 NA non-coding downstream 200249 9219599 ~ 9219903 (-)
G153455 NA non-coding downstream 216293 9196758 ~ 9203859 (-)
G153539 NA non-coding upstream 121420 9542118 ~ 9548305 (-)
G153481 NA non-coding upstream 182159 9602857 ~ 9603106 (-)
G153588 NA non-coding upstream 331561 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 358591 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 373394 9794092 ~ 9842982 (-)
G153499 NA other downstream 24225 9395424 ~ 9395927 (-)
LOC120574367 NA other downstream 31147 9387327 ~ 9389005 (-)
LOC120574366 NA other downstream 43115 9376433 ~ 9377037 (-)
LOC120574646 NA other downstream 51003 9368657 ~ 9369149 (-)
LOC120574365 NA other downstream 70379 9348069 ~ 9349773 (-)
G153473 NA other upstream 7485 9428183 ~ 9433001 (-)
LOC120574374 NA other upstream 18276 9438974 ~ 9439493 (-)
LOC120574375 NA other upstream 19866 9440564 ~ 9441100 (-)
LOC120574607 NA other upstream 21549 9442247 ~ 9442797 (-)
LOC120574376 NA other upstream 22545 9443243 ~ 9443724 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026535 ighv9-4 coding NC_007114.7 CM002887.2 34036619 ~ 34042028 (-)
grasscarp (Ctenopharyngodon idella) CI01083751_00000037_00000350 IGHV10-1 coding CI01083751 null 37 ~ 391 (+)