LOC120574455


Basic Information

Item Value
gene id LOC120574455
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10784112 ~ 10791565 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208443
ACGAAATACAGGAAATATCTGTCTCCAGTCAAAGCTCTGGTTTTGAAAAGAATCTCTCAGTTTTACTTTCTAATTGCCTCACTCGGTACCAGGCAGCTCCAGGAGAAAGGTTAAGATTTCTGAAGGTGGAAAAAGGATACCCAGCAAAGGATTCGGCTCCACCATACCCTGGGCCAACTATGAACCACGGGGGTGCCGTGGAGCAGCCAGGTGCTCCGCCCCTGGCTGCACCTGTCGCAACAGTGACTCAAACGATAGTAACGCCAGCACTAAATGATGTCCCGGGACAAACTGTGTGTACCCACTGCCAGGAGACGGTCATCACCAAGACAGAGCACAAAGCAGGCCTGATGACCTGGGCCATCTGTGGTGGCCTCACCCTCTTTGGGttttttctttgctgttttATCCCGTTCTGTGTTGATTCCTGCAAAGATGTGGAGCATCGCTGTCCTAACTGCAACAATGTCATCTACATATACAAGCGAATGTGAAAGTGACTGTGAATGAAGGAAAAGACCTCAATGCTTATCTGTAGCCTTAACTTGCTCTACAACatctttggtaacactttacaataaggtacacaaaaaaataggtagttaatgattagtttttgaaagggtagttactgtttttcagaagggtacttaccctttttcagaagggtaacgaatgattagttaccctttttcagaagggtagttactgtttttcagaagggtaacgaatgattagttacccttttttaGAAGGgtacttactgtttttcagaagggtagttacccttttt
>XM_039824730.1
CTAAAACAGTCCGTCCATTACATTGCACGAAATACAGGAAATATCTGTCTCCAGTCAAAGCTCTGGTTTTGAAAAGAATCTCTCAGTTTTACTTTCTAATTGCCTCACTCGGTACCAGGCAGCTCCAGGAGAAAGGTTAAGATTTCTGAAGGTGGAAAAAGGATACCCAGCAAAGGATTCGGCTCCACCATACCCTGGGCCAACTATGAACCACGGGGGTGCCGTGGAGCAGCCAGGTGCTCCGCCCCTGGCTGCACCTGTCGCAACAGTGACTCAAACGATAGTAACGCCAGCACTAAATGATGTCCCGGGACAAACTGTGTGTACCCACTGCCAGGAGACGGTCATCACCAAGACAGAGCACAAAGCAGGCCTGATGACCTGGGCCATCTGTGGTGGCCTCACCCTCTTTGGGttttttctttgctgttttATCCCGTTCTGTGTTGATTCCTGCAAAGATGTGGAGCATCGCTGTCCTAACTGCAACAATGTCATCTACATATACAAGCGAATGTGAAAGTGACTGTGAATGAAGGAAAAGACCTCAATGCTTATCTGTAGCCTTAACTTGCTCTACAACatctttggtaacactttacaataaggtacacaaaaaaataggtagttaatgattagtttttgaaagggtagttactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208443 True 793 TUCP 0.44 5 10784112 10791539
XM_039824730.1 False 660 mRNA 0.46 5 10784271 10791565

Neighbor

gene id symbol gene type direction distance location
spag9a NA coding downstream 11859 10738908 ~ 10772253 (-)
LOC120574864 tob1 coding downstream 106822 10673342 ~ 10677290 (-)
luc7l3 luc7l3,LOC102798435 coding downstream 166055 10608998 ~ 10618057 (-)
gtf2f1 gtf2f1 coding downstream 608101 10166712 ~ 10176011 (-)
cacna1aa NA coding downstream 634630 10061286 ~ 10149482 (-)
LOC120574453 NA coding upstream 16742 10808307 ~ 10811425 (-)
LOC120574454 LOC106520401,LOC108239207,LOC102796162 coding upstream 21288 10812853 ~ 10820285 (-)
dhps dhps,LOC102794989 coding upstream 140233 10931798 ~ 10941167 (-)
fbxw9 NA coding upstream 151247 10942812 ~ 10947670 (-)
LOC120575016 tnpo2,LOC103360699 coding upstream 162605 10954170 ~ 10969756 (-)
G153734 NA non-coding downstream 189105 10594743 ~ 10595007 (-)
G153671 NA non-coding downstream 489946 10286635 ~ 10294166 (-)
G153663 NA non-coding downstream 614673 10163444 ~ 10169439 (-)
G153631 NA non-coding downstream 745327 10034440 ~ 10038785 (-)
G153630 NA non-coding downstream 756413 10025317 ~ 10027699 (-)
G153937 NA non-coding upstream 113790 10905355 ~ 10907608 (-)
G153950 NA non-coding upstream 159006 10950571 ~ 10959521 (-)
G153943 LOC104934589,LOC102791985 non-coding upstream 241641 11033206 ~ 11035516 (-)
G153987 NA non-coding upstream 277478 11069043 ~ 11073776 (-)
G154036 NA non-coding upstream 480254 11271819 ~ 11272848 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 393936 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 961119 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1047278 9735626 ~ 9736834 (-)
LOC120574609 NA other downstream 1050917 9732686 ~ 9733195 (-)
LOC120574633 LOC102776372 other downstream 1052872 9730610 ~ 9731240 (-)
LOC120574486 NA other upstream 286980 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 306751 11098316 ~ 11137528 (-)
G154033 NA other upstream 411885 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1294420 12085985 ~ 12090981 (-)
cep112 NA other upstream 1635939 12427504 ~ 12565471 (-)

Expression


Co-expression Network