LOC120574454 (LOC106520401,LOC108239207,LOC102796162)


Basic Information

Item Value
gene id LOC120574454
gene name LOC106520401,LOC108239207,LOC102796162
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10812853 ~ 10820285 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824728.1
GGTAAGGAGGGGGAGGAATCAGAGATTGTAGGACTAAAACACTCCGTCCATTACATTGTAAGAAATACAGGAAATACCTGAAATATCTGTCTCCGGTCACAGTTTTACTGTGCTTCTAAATGCCTCACTCGGTAACAGGCAGCTCCAGGAGAAAGGATTtctgaagatggaaaaaggatACCCAGCAGAGGATTCGGCTCCACCATATCCTGGGCCACCTATGAACTACGGGGGTGCCGTGCAGCAGCCAGGGATGTACCCTCAGCCGGTCTTCTACCCTGCAGCGCCTCCACCTGCTTACCAGGGAGGTGCTCCTTATGCTCCGCCCCCGGCTGCACCTGTCACAACAGTGACTCACATGATAGTAACGCCAGCACTAAATGATGTCCCGGGACAAACTGTGTGTCCCCACTGCCAGCAGACGGTCATCACCAAGACAGAGCACACAGCAGGCCTGATGACCTGGGCCATCTGTGGTGGCCTCACCCTCTTTGGgtgtTTTCTTTGCTGTTGTATCCCGTTCTGTGTTGACTCCTGCCAAGATGTGGAGCATCGCTGTCCTAACTGCAACAATGTCATCTACATATACAAGCGAATGTGAAAGTGACTCAATGCTTATCTGTAGCCTTAACTTGCtctacaacattttttatactgattaaaattatattaaatGCAGCTATACTGACATTGTTGTCATTTTACGTCTCTTTTACATTATAATTTCAATGCTAATCAAATACATGATGAGGCATCAAACTGTGGATATTACTGTATATTCAGCAAGCATTTGTAGTACATTAAACatataaatgccaataaaaaaacaacctttttttcagCTGTCTGCAGTATTATGAGTTGTCCAGCGGTGAATCCAGTTGGTTGCTGGGTGTTTTACATTTTCTGCCGCATAATTTCATGTTTTCTCAGTGCCCCgtattttcttctgtcttttcTCATTGTGCTTCATAGTTTGTAATTCATAGTTTGTAATTCATTGTTTTACTAAttattcctgtttttcttttaaaagaaagGCATTTGTTGAATGTTCTGTTTGATCCTCTCTCAGAAGAGGGTCAACGAGACAGATTACAGTCATGCTAACTCCTCTGTGAGGCTACACACAGCAGTGCTTGGAGCTAAATGCTCATGTTAGTATGTGAACATACAGTGAAAATGCTAACATGTAGGAGATAGGCTATAATAAGGTTCAACTTTtgagtttagcgtgttagcatgctaacattaaaggtgcagCAGGTAAGACttacaaaactaactttctgtcatatttcattcattctcccttgtgggggcaggggcttaggagaccgttttgggctttagcagaaaggggggagggactgagaagttgttcacacaatcctacctacagcacctttaacactaaacacaaagtatggTTACGGAGATGTTTTTGTCTTGAGgtgtttggtcataaaccaaagtattggacaaaaagAACTTTTGACTTGATGGTGCTAAATGAAAGGTTAGGGCACCAAAGTTATCATGATTTATCATCTGGGGATGCTGACCTTCAGGTAATGTCACCAATTATCTGCATGTACACAGTGtatatttattgtaattttaaaataaatcggACAACTAATCTA

Function

NR:

description
PREDICTED: cell death-inducing p53-target protein 1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824728.1 True 1646 mRNA 0.42 5 10812853 10820285

Neighbor

gene id symbol gene type direction distance location
LOC120574453 NA coding downstream 1428 10808307 ~ 10811425 (-)
spag9a NA coding downstream 40600 10738908 ~ 10772253 (-)
LOC120574864 tob1 coding downstream 135563 10673342 ~ 10677290 (-)
luc7l3 luc7l3,LOC102798435 coding downstream 194796 10608998 ~ 10618057 (-)
gtf2f1 gtf2f1 coding downstream 636842 10166712 ~ 10176011 (-)
dhps dhps,LOC102794989 coding upstream 111513 10931798 ~ 10941167 (-)
fbxw9 NA coding upstream 122527 10942812 ~ 10947670 (-)
LOC120575016 tnpo2,LOC103360699 coding upstream 133885 10954170 ~ 10969756 (-)
LOC120575512 NA coding upstream 147821 10968106 ~ 10968174 (-)
il12rb2l NA coding upstream 155356 10975641 ~ 10987160 (-)
G153734 NA non-coding downstream 217846 10594743 ~ 10595007 (-)
G153671 NA non-coding downstream 518687 10286635 ~ 10294166 (-)
G153663 NA non-coding downstream 643414 10163444 ~ 10169439 (-)
G153631 NA non-coding downstream 774068 10034440 ~ 10038785 (-)
G153630 NA non-coding downstream 785154 10025317 ~ 10027699 (-)
G153937 NA non-coding upstream 85070 10905355 ~ 10907608 (-)
G153950 NA non-coding upstream 130286 10950571 ~ 10959521 (-)
G153943 LOC104934589,LOC102791985 non-coding upstream 212921 11033206 ~ 11035516 (-)
G153987 NA non-coding upstream 248758 11069043 ~ 11073776 (-)
G154036 NA non-coding upstream 451534 11271819 ~ 11272848 (-)
LOC120574455 NA other downstream 21288 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 422677 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 989860 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1076019 9735626 ~ 9736834 (-)
LOC120574609 NA other downstream 1079658 9732686 ~ 9733195 (-)
LOC120574486 NA other upstream 258260 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 278031 11098316 ~ 11137528 (-)
G154033 NA other upstream 383165 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1265700 12085985 ~ 12090981 (-)
cep112 NA other upstream 1607219 12427504 ~ 12565471 (-)

Expression


Co-expression Network