G155234 (LOC106925874,LOC103468796,LOC106529779,LOC106946608)


Basic Information

Item Value
gene id G155234
gene name LOC106925874,LOC103468796,LOC106529779,LOC106946608
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15541557 ~ 15544017 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210389
CTTCTCCACTCAGTAGTAGTGTTTACATAAAGGagcaaaacaaagattttctttttaaaactacTACAATACTTCTCTCAAACACATGCAGTCAGAGTAATATTTTATCTgttatcataaaaatgtaaacacacactaTTTCCCTCAGTAGAGGATTTGGAGGACAAAaacttttattgtatttaacacTTACAGAGAACAAGGTTATTAAAGGATATCAGgtatgaaataataaaatgagtTCAGTTGTTCCCAAACAGCCTCCTGCAGCTTTTCAGAGAAAAAAGCTAACTGGaataacattaaatataaaataattacaaGTAGCAAAATCAAAAGGAGAGGAGTCAGGTTTGTCATTGTTTAGGGTGTATTTGTGGGACTTGAAGGCATTCCAAAATTTTGGAAACTTAAACATAACCTTTGACTTGTGTGGCAGGTGCCCTGCGAGGACTACTTTCTCCACTGCTGAAGGTGGGAGAGCCTGGCATGCCAGGGGGACTTGACCCAGCATAGAGCAGAGATCCCCCAATGAGGAGCAAGGCTGATGCCCCCCAGCCAATGTAAAGGGCAGGGCCAAGCTCACGCTTGTGTGGGGCTGCCACATGTGGATCATAGAAATCCCTGATGATGGAGTGGGCAGTCCAGCAGACGGGCACAAGGTAGAGGAACCCTGCGATGGCAAAAATGGCGCCCGAGATGCGAGCAATACGGGCCTTGACGCTGTTTACACCGATGCACTTAGTACACTTGACTCCTAGGACACCCAGAGACAGAGCCAGGCCACAGATCAGAATGGAGAACACGGTGAGGCCTCGGGCAGCCTGCATGTCACTGGGCAGAGCCAGCAAGCTGTCATACACCTTACACTGGATCTGACCTGTGCTCTGCACAATGCAATTCATCCAAAGGCCTTCCCAAATGATCTGAGCCGTCACTATGTTGTTACCGATGAAGGCAGTGACCCGCCACAGAGGGATGGCACAGACTATcgccccacccacccaccccacaAGGGACATGATTAGGCCCAGCAACTGCATGCCCGTGGTTGCCATGGTGAAATGTGTTTGAATCAGATGgatttgtctttgttttatttcagtCTTTGTTTGTTGCAGAAAGACAACTTATAGTCCCACAAAGAGTCTACAGTACTGGAAATATTGCGCTCCACTGCAGGATCCTCAGTCTTCAGGTGATGATCTCGTTTAGCTCGGCTTGGGTCAGACAAGGACAGGTATCCTCAAATGAAGTTCTTGCGCTTCTCTCCTTGGTCCTAGTGTTACTGGTCTTTGCTAGTGTAGATCAGTTGGGATGCCTGGAGTTGTGAATGACGGCCCTGAGAATTCAGTTCAGTCCACAGGAAGGCTGGAGAGTCTCTATCTCGGAGGTCAGGTGAACTGAAGTAGAGAGGGTCGATCAGTTTCGACACCCAGGACTGGACTGGAGATGGGGCTGCCCTCCGAGATGCCAGCAC

Function

NR:

description
PREDICTED: claudin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210389 True 1480 lncRNA 0.47 2 15541557 15544017

Neighbor

gene id symbol gene type direction distance location
rsad1 rsad1,LOC102775824 coding downstream 7031 15530445 ~ 15534526 (-)
epn3a epn3 coding downstream 19048 15512352 ~ 15522509 (-)
LOC120573957 LOC104960327,LOC108241277,LOC101068065,LOC104918611,LOC102777936 coding downstream 31593 15507726 ~ 15509964 (-)
tbcd NA coding downstream 36103 15476359 ~ 15505454 (-)
LOC120573906 acsf2,LOC102294907 coding downstream 117354 15417045 ~ 15424203 (-)
zgc:103625 LOC104960319,LOC103356288,LOC100689735 coding upstream 13063 15557080 ~ 15558737 (-)
trnae-cuc_25 NA coding upstream 20116 15564133 ~ 15564204 (-)
gcgra LOC103367158 coding upstream 61486 15605503 ~ 15645622 (-)
LOC120574497 LOC104960315,LOC103367159 coding upstream 118257 15662274 ~ 15664597 (-)
crb3a crb3 coding upstream 126148 15670165 ~ 15673455 (-)
G155232 LOC104918633,LOC103356299,LOC102214648,LOC102291995,LOC101464722,LOC100701808 non-coding downstream 13952 15526949 ~ 15527605 (-)
G155151 NA non-coding downstream 136988 15368229 ~ 15404569 (-)
G155126 NA non-coding downstream 227965 15312080 ~ 15313592 (-)
G155106 NA non-coding downstream 379122 15156429 ~ 15162435 (-)
G155047 NA non-coding downstream 556193 14985134 ~ 14985364 (-)
G155239 NA non-coding upstream 6987 15551004 ~ 15632836 (-)
G155242 hgs non-coding upstream 10026 15554043 ~ 15554886 (-)
G155295 NA non-coding upstream 138352 15682369 ~ 15691652 (-)
G155298 LOC108429687,LOC105910964,LOC100700452,LOC104918597,LOC103367163,LOC101470440 non-coding upstream 150756 15694773 ~ 15695558 (-)
G155307 LOC104918593,LOC104960307,LOC103367166 non-coding upstream 184916 15728933 ~ 15774308 (-)
metrnla metrnl,LOC102778978 other downstream 92040 15443124 ~ 15449517 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other downstream 401704 15106757 ~ 15139853 (-)
LOC120573850 LOC106674513,LOC106098575 other downstream 531217 15009798 ~ 15010340 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other downstream 532845 15003013 ~ 15008712 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other downstream 652075 14879627 ~ 14889482 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other upstream 173830 15717847 ~ 15724422 (-)
LOC120574537 NA other upstream 197746 15741763 ~ 15745572 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other upstream 202774 15746791 ~ 15788515 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other upstream 269041 15813058 ~ 15815369 (-)
LOC120574545 chchd5 other upstream 609770 16153787 ~ 16156067 (-)

Expression


Co-expression Network