tecra (LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989)


Basic Information

Item Value
gene id tecra
gene name LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15717847 ~ 15724422 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824905.1
CTGTGTAACAAGCGAGGTGCAGAACAGACAGGAGATGTGTCTTATAGCCTATAAGATAGGTCTAATGAGAGCACATTGGCATGTGTCACTGGGTTGGGCTGTATGTGGCTGCCCAAGGTTACCAAGCTGGTGTAGAGCAAATCAGGCAACTTATATTTAGCCTTGCAAATGGCGCGCTATGGATTATGTCTTGGGGCTCTCCAGTTTCGTCTTCAGTGCGTTTTGTAGCATGAAGGGGGGCTGTGGATCATGAAGAGGCTGTTATTCAGGTGAGGAGCAGGTTCACTTCATATTCTTAGACCAGCTCTTCTTCCACTTCTTCTCCCTTTCTTCCCTGCTCACTTTCCCTCCACTCTCTCATCCATACACTCGTATCAAAGTGTTTATGGTCTCACATACTTCTTCTCGACGTGGGGGGCTATTCAGAGCGTCCAAAAGGCACCAAAGAAGACACGCTTGAGTTGGACTGACAGTTGCGTTGAGGGGTGAGCAGGGAGTTGCTTCCCATACCAGGAGAGGACATCCAGTGTGATTGGACGTATCACAGATTATTTCATCAACAGGCTACTGAGATTTGGGATTAAACAGTATCATGGATGTACTCGCTTTAGAGGCAAAGAGTGTAAATGGAGCAGATGCTGAAAAGAAGTCTTCATCAAGGCCAAAACCGAAACCTCCTAAAAAGGCCAAAAGGATTGTTTACTTTGAGGTGGAGATCTTGGACTCCAAGACTAAAGagaaactgctgctgctggacaaGGTGGAACCAACTGCCACTGTTTTCGACATCAAAGCTTTGTTTCAAAAATCATATCCAAAGTGGTATCCAGCCAGACAGTCCCTTCGTTTGGATCCAAAGGCCAGATGTCTCAGGGATGAGGAAATTCTGCAGACACTTCCTGTGGGAACCACAGCCAGCTTTTACTTCAGTGACCTAGGACCTCAGCTCACATGGGGAACCGTGTTCCTAGCAGAGTGTGTTGGTCCACTGGTCATATACTTAATGTTCTACTTCCACCTTCCCTTCATCTACTCTCCGAAATATGACTTCACCAGCAGCAAGCACTGGGTCGTACACTTGGCCTGCATGTGTCACTCCTTCCACTACATCAAGAGGATCCTGGAGACACTGTTTGTCCACCGTATCTCCCATGGGACCATGCCTCTCAGAAACATATTTAAGAACTGTGGCTATTACTGGTGCACTGCAGCTTGGATGGCGTACTACATTAACCACCCTCTCTACACCACACCCTATTACGGGCAGCAGCAGGTGAATACAGGACTTTATATTTTCTTGTTCTGTCAAGTAGGGAATTTTTCCATCCATGTCGCTCTTCGTAACCTCAAACCACCAGGTTCAAAAATCAAGAAGATTCCTTACCCAACGAAAAATCCCTTCACATGGATGTTTTGGCTGGTCTCTTGTCCGAACTACACATATGAGATGGGCACCTGGATTGGCTTCACAGTGATGACCCAGTGTGTGCCTGTGGCTTTCTTCACTCTCGTGGCCTTCATTCAGATGACTGTGTGGGCCAAAGGCAAACACTGCGGCTACTTAAAGGAGTTCAGAGATTATCCGACCCTGCGCTCCTCCATACTCCCTTTCATCCTGTAGAGCTGGGCACAGAAAACAACGGTCACTACACACAGCCGGTTCTTTTTAAGGGCCTCTCCATCCACTGGATGTCAGAAAGTGTGTGCTGAGGtcaacagcatggatggattttggTCATATGGATTCCATGTAACATTTTCTTACATGTCACTCCATAAGGAGTAGCTGTTACGGTTACTCTGAGCGTTGGACCGGTGAATGCAGGACTGTTAGAGGCAAAGGAAGCCATCAGAGGTAAATGCCGCAAAGTCTTAATTTAAAGTTGTATGTGCTATTGAAGAGCAAGaggatgaaaaaaatattttgctaCGCTGCTGTAACATGTTTGAGTGAGAGTgctgtttagtttaaaaaaaaaatcacattgttTTCATAGATTTTGGCAACCTGATCAGTGACGTTTCCCACCAAGAGGCTAATCTGCAGTGTCCAATTAGTGTGCAGCCTGGAGCTGAGAACTTTGTGGCCTCCTGCAGTGTTCTACTGATCCAAGTGACATTTACACCATGATAGTACTAGTGCTATCTGGGTTAGAAATAGAATGGGTGGGAAAGTGTTTTTCTTGTATATCTAAAATAATGGAGAGAAAAACACTGCTGATAGCATTAACACGCACATCCTTTAAAATATACCTTACTTACACATGATTATAGTGCAGAGTGTTCaattgaagtaaaaaaaaaaaaggttttagtcATCAAACCATTGTCATAGTATTATATGCACATATTTATAAcacatatttattattatgtttcTCTGCATTGTTGGCGCTGTGgcgatgttttatttttatactatTCTGAAGAGTTGTGCAGCTACAAACACATACTGAGACTTTATCTGGTGGTGCTTTCCAGGATTGGATAAGGATGTGGGAAAAACTTGCAAAATTGTTTATTCTTTGCTATTCCATTTTCACTGAATGTGCATTTCACAGAATGCTGCATCGACTGAaccttttaaatgaaatgaggaACTTCTGCGTGAAGAGACCATTCAGTGTCGAGCAGGACTTCTATCTAAAGTGGAAAGTTTGTTTGCAATATTTGATTGACACTGTAGAGGGGCCTTCACACCCTCTTAAGGCAACGCTGACCCACTGAATCAATTGTTTTTAGGCAAACTATAAATACAACGAGTGTAATAGGGtaatgggtaaaaaaaaaaa
>XR_005641871.1
CTGTGTAACAAGCGAGGTGCAGAACAGACAGGAGATGTGTCTTATAGCCTATAAGATAGGTCTAATGAGAGCACATTGGCATGTGTCACTGGGTTGGGCTGTATGTGGCTGCCCAAGGTTACCAAGCTGGTGTAGAGCAAATCAGGCAACTTATATTTAGCCTTGCAAATGGCGCGCTATGGATTATGTCTTGGGGCTCTCCAGTTTCGTCTTCAGTGCGTTTTGTAGCATGAAGGGGGGCTGTGGATCATGAAGAGGCTGTTATTCAGGTGAGGAGCAGGTTCACTTCATATTCTTAGACCAGCTCTTCTTCCACTTCTTCTCCCTTTCTTCCCTGCTCACTTTCCCTCCACTCTCTCATCCATACACTCGTATCAAAGTGTTTATGGTCTCACATACTTCTTCTCGACGTGGGGGGCTATTCAGAGCGTCCAAAAGGCACCAAAGAAGACACGCTTGAGTTGGACTGACAGTTGCGTTGAGGGGTGAGCAGGGAGTTGCTTCCCATACCAGGAGAGGACATCCAGTGTGATTGGACGTATCACAGATTATTTCATCAACAGGCTACTGAGATTTGGGATTAAACAGTATCATGGATGTACTCGCTTTAGAGGCAAAGAGTGTAAATGGAGCAGATGCTGAAAAGAAGTCTTCATCAAGGCCAAAACCGAAACCTCCTAAAAAGGCCAAAAGGATTGTTTACTTTGAGGTGGAGATCTTGGACTCCAAGACTAAAGagaaactgctgctgctggacaaGGTGGAACCAACTGCCACTGTTTTCGACATCAAAGCTTTGTTTCAAAAATCATATCCAAAGTGGTATCCAGCCAGACAGTCCCTTCGTTTGGATCCAAAGGCCAGATGTCTCAGGGATGAGGAAATTCTGCAGACACTTCCTGTGGGAACCACAGCCAGCTTTTACTTCAGTGACCTAGGACCTCAGCTCACATGGGGAACCGTGTTCCTAGCAGAGTGTGTTGGTCCACTGGTCATATACTTAATGTTCTACTTCCACCTTCCCTTCATCTACTCTCCGAAATATGACTTCACCAGCAGCAAGCACTGGGTCGTACACTTGGCCTGCATGTGTCACTCCTTCCACTACATCAAGAGGATCCTGGAGACACTGTTTGTCCACCGTATCTCCCATGGGACCATGCCTCTCAGAAACATATTTAAGAACTGTGGCTATTACTGGTGCACTGCAGCTTGGATGGCGTACTACATTAACCACCCTCTCTACACCACACCCTATTACGGGCAGCAGCAGGTGAATACAGGACTTTATATTTTCTTGTTCTGTCAAGTAGGGAATTTTTCCATCCATGTCGCTCTTCGTAACCTCAAACCACCAGGTTCAAAAATCAAGAAGATTCCTTACCCAACGAAAAATCCCTTCACATGGATGTTTTGGCTGGTCTCTTGTCCGAACTACACATATGAGATGGGCACCTGGATTGGCTTCACAGTGATGACCCAGTGTGTGCCTGTGGCTTTCTTCACTCTCGTGGCCTTCATTCAGATGACTGTGTGGGCCAAAGGCAAACACTGCGGCTACTTAAAGGAGTTCAGAGATTATCCGACCCTGCGCTCCTCCATACTCCCTTTCATCCTGTAGAGCTGGGCACAGAAAACAACGGTCACTACACACAGCCGGTTCTTTTTAAGGGCCTCTCCATCCACTGGATGTCAGAAAGTGTGTGCTGAGGtcaacagcatggatggattttggTCATATGGATTCCATGTAACATTTTCTTACATGTCACTCCATAAGGAGTAGCTGTTACGGTTACTCTGAGCGTTGGACCGGTGAATGCAGGACTGTTAGAGGCAAAGGAAGCCATCAGAGATTTTGGCAACCTGATCAGTGACGTTTCCCACCAAGAGGCTAATCTGCAGTGTCCAATTAGTGTGCAGCCTGGAGCTGAGAACTTTGTGGCCTCCTGCAGTGTTCTACTGATCCAAGTGACATTTACACCATGATAGTACTAGTGCTATCTGGGTTAGAAATAGAATGGGTGGGAAAGTGTTTTTCTTGTATATCTAAAATAATGGAGAGAAAAACACTGCTGATAGCATTAACACGCACATCCTTTAAAATATACCTTACTTACACATGATTATAGTGCAGAGTGTTCaattgaagtaaaaaaaaaaaaggttttagtcATCAAACCATTGTCATAGTATTATATGCACATATTTATAAcacatatttattattatgtttcTCTGCATTGTTGGCGCTGTGgcgatgttttatttttatactatTCTGAAGAGTTGTGCAGCTACAAACACATACTGAGACTTTATCTGGTGGTGCTTTCCAGGATTGGATAAGGATGTGGGAAAAACTTGCAAAATTGTTTATTCTTTGCTATTCCATTTTCACTGAATGTGCATTTCACAGAATGCTGCATCGACTGAaccttttaaatgaaatgaggaACTTCTGCGTGAAGAGACCATTCAGTGTCGAGCAGGACTTCTATCTAAAGTGGAAAGTTTGTTTGCAATATTTGATTGACACTGTAGAGGGGCCTTCACACCCTCTTAAGGCAACGCTGACCCACTGAATCAATTGTTTTTAGGCAAACTATAAATACAACGAGTGTAATAGGGtaatgggtaaaaaaaaaaa

Function

NR:

description
PREDICTED: very-long-chain enoyl-CoA reductase-like

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors molecular_function

KEGG:

id description
K10258 TER, TSC13, CER10; very-long-chain enoyl-CoA reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824905.1 True 2792 mRNA 0.44 11 15717847 15724422
XR_005641871.1 False 2650 transcript 0.44 12 15717847 15724422

Neighbor

gene id symbol gene type direction distance location
crb3a crb3 coding downstream 44392 15670165 ~ 15673455 (-)
LOC120574497 LOC104960315,LOC103367159 coding downstream 53250 15662274 ~ 15664597 (-)
gcgra LOC103367158 coding downstream 72225 15605503 ~ 15645622 (-)
trnae-cuc_25 NA coding downstream 153643 15564133 ~ 15564204 (-)
zgc:103625 LOC104960319,LOC103356288,LOC100689735 coding downstream 159110 15557080 ~ 15558737 (-)
qtrt1 qtrt1 coding upstream 65629 15790051 ~ 15796449 (-)
tmed1a tmed1 coding upstream 109078 15833500 ~ 15837068 (-)
adgrl1a adgrl1,LOC103392844 coding upstream 169587 15894009 ~ 15990185 (-)
trim35-13 LOC103364132,LOC102792268,LOC102305948,LOC101478242 coding upstream 364992 16089414 ~ 16092725 (-)
vac14 vac14 coding upstream 371289 16095711 ~ 16098989 (-)
G155298 LOC108429687,LOC105910964,LOC100700452,LOC104918597,LOC103367163,LOC101470440 non-coding downstream 22289 15694773 ~ 15695558 (-)
G155295 NA non-coding downstream 26195 15682369 ~ 15691652 (-)
G155239 NA non-coding downstream 85011 15551004 ~ 15632836 (-)
G155242 hgs non-coding downstream 162961 15554043 ~ 15554886 (-)
G155234 LOC106925874,LOC103468796,LOC106529779,LOC106946608 non-coding downstream 173830 15541557 ~ 15544017 (-)
G155307 LOC104918593,LOC104960307,LOC103367166 non-coding upstream 4511 15728933 ~ 15774308 (-)
LOC120574547 NA non-coding upstream 98569 15822991 ~ 15825654 (-)
G155359 NA non-coding upstream 166599 15891021 ~ 15891931 (-)
G155439 NA non-coding upstream 329568 16053990 ~ 16054756 (-)
G155460 NA non-coding upstream 386277 16110699 ~ 16112063 (-)
metrnla metrnl,LOC102778978 other downstream 268330 15443124 ~ 15449517 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other downstream 577994 15106757 ~ 15139853 (-)
LOC120573850 LOC106674513,LOC106098575 other downstream 707507 15009798 ~ 15010340 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other downstream 709135 15003013 ~ 15008712 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other downstream 828365 14879627 ~ 14889482 (-)
LOC120574537 NA other upstream 17341 15741763 ~ 15745572 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other upstream 22369 15746791 ~ 15788515 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other upstream 88636 15813058 ~ 15815369 (-)
LOC120574545 chchd5 other upstream 429365 16153787 ~ 16156067 (-)
LOC120574432 LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284 other upstream 506037 16230459 ~ 16259025 (-)

Expression


Co-expression Network