G155257


Basic Information

Item Value
gene id G155257
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15661368 ~ 15731815 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210424
agtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctacaAGTATGTTGAGAGCATGTGTGTATCCTGTTATGTTTGACTGACAAACTACCAAAAGCTATTTACTGCATCTGTACCCtttgcatacagtatgtaccaTGTTTCTGCCAGTGagtttatttcttcttctttttgaccCAACATGGCATCAGTCTGATCCCCGCTAAATATTGCAGACTGAGATATGAAAATAAGTTTAAATACCTGACCTAAATGCCTGcagaatatatttttgttgaattATTTTGTCTTATACGCTCTCGTACCTGAGAGCATCCGCACCAAGATGTACATCATCTGGAAATATGGAATTTAAAAGTTCAGTAGGAATcttaagaaaatatatatagaaCTCAGAGGCATATTTAGCCCTGTGCACCTTGACTGTAGTGATGATGGATGTTAGTAAATCAGTTggtttattttcacattatttagtatttttagtGTTGACTGCTCCTGCTGGAGTTTTAAGTTTCTAACATGTGGTTTAACATGAATGTAGAGATGTGTAATCTCTGTAATGTGTATGTTTTTCTtgccaacattttccttttttaagggAAAAGGGTGTACACATCTTGTTTTATCTCTGGTTTATGTTTTGAAATGCCTCAGGTTGGCATTCAAGATATTTTGATTTTTAACAACCAAGCTTTTTCGAATTGATAGTGGGGTGGACATCTTTAATAGACCCTCCCTATGCTGTGATGATTTGCATTTCCACATTAAAAGAGACCGGCAAATATCTAATCAAGTATGGCCTACATGTTTGAGTTATTGAGGACATTTTAGCGATTAAAGCATTGAAAGCTAATTTCATGGTAGTCAACATATTACTATTTAATATCTTGTGAACAGATTTGAAACTTAAAGATTCAAGAAAAGTTTTCCTTTCCTATGTATGCagtgctttttatttattttttacaaaatgtttaattgcacAAAAA
>TU210425
ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctacaAGTATGTTGAGAGCATGTGTGTATCCTGTTATGTTTGACTGACAAACTACCAAAAGCTATTTACTGCATCTGTACCCtttgcatacagtatgtaccaTGTTTCTGCCAGTGagtttatttcttcttctttttgaccCAACATGGCATCAGTCTGATCCCCGCTAAATATTGCAGACTGAGATATGAAAATAAGTTTAAATACCTGACCTAAATGCCTGcagaatatatttttgttgaattATTTTGTCTTATACGCTCTCGTACCTGAGAGCATCCGCACCAAGATGTACATCATCTGGAAATATGGAATTTAAAAGTTCAGTAGGAATcttaagaaaatatatatagaaCTCAGAGGCATATTTAGCCCTGTGCACCTTGACTGTAGTGATGATGGATGTTAGTAAATCAGTTggtttattttcacattatttagtatttttagtGTTGACTGCTCCTGCTGGAGTTTTAAGTTTCTAACATGTGGTTTAACATGAATGTAGAGATGTGTAATCTCTGTAATGTGTATGTTTTTCTtgccaacattttccttttttaagggAAAAGGGTGTACACATCTTGTTTTATCTCTGGTTTATGTTTTGAAATGCCTCAGGTTGGCATTCAAGATATTTTGATTTTTAACAACCAAGCTTTTTCGAATTGATAGTGGGGTGGACATCTTTAATAGACCCTCCCTATGCTGTGATGATTTGCATTTCCACATTAAAAGAGACCGGCAAATATCTAATCAA
>TU210429
ctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctacaAGTATGTTGAGAGCATGTGTGTATCCTGTTATGTTTGACTGACAAACTACCAAAAGCTATTTACTGCATCTGTACCCtttgcatacagtatgtaccaTGTTTCTGCCAGTGagtttatttcttcttctttttgaccCAACATGGCATCAGTCTGATCCCCGCTAAATATTGCAGACTGAGATATGAAAATAAGTTTAAATACCTGACCTAAATGCCTGcagaatatatttttgttgaattATTTTGTCTTATACGCTCTCGTACCTGAGAGCATCCGCACCAAGATGTACATCATCTGGAAATATGGAATTTAAAAGTTCAGTAGGAATcttaagaaaatatatatagaaCTCAGAGGCATATTTAGCCCTGTGCACCTTGACTGTAGTGATGATGGATGTTAGTAAATCAGTTggtttattttcacattatttagtatttttagtGTTGACTGCTCCTGCTGGAGTTTTAAGTTTCTAACATGTGGTTTAACATGAATGTAGAGATGTGTAATCTCTGTAATGTGTATGTTTTTCTtgccaacattttccttttttaagggAAAAGGGTGTACACATCTTGTTTTATCTCTGGTTTATGTTTTGAAATGCCTCAGGTTGGCATTCAAGATATTTTGATTTTTAACAACCAAGCTTTTTCGAATTGATAGTGGGGTGGACATCTTTAATAGACCCTCCCTATGCTGTGATGATTTGCATTTCCACATTAAAAGAGACCGGCAAATATCTAATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210424 True 1017 lncRNA 0.35 3 15665459 15731815
TU210425 False 800 lncRNA 0.36 3 15661368 15731619
TU210429 False 810 lncRNA 0.36 3 15661368 15731619

Neighbor

gene id symbol gene type direction distance location
LOC120574430 LOC104960337 coding upstream 311 15660071 ~ 15661057 (+)
LOC120574823 NA coding upstream 91059 15567077 ~ 15570309 (+)
mrpl12 mrpl12 coding upstream 97965 15559318 ~ 15563403 (+)
hgs hgs coding upstream 104351 15545816 ~ 15557017 (+)
cldnk LOC106925874,LOC103468796,LOC106529779,LOC106946608 coding upstream 117501 15542947 ~ 15543867 (+)
gipc1 gipc1,LOC106529657 coding downstream 847 15732662 ~ 15737461 (+)
trim35-12 LOC101076486 coding downstream 6117 15737932 ~ 15741720 (+)
dnm2a dnm2,LOC102793658,LOC101473937,LOC102206614 coding downstream 64810 15796625 ~ 15834604 (+)
tnfsf14 NA coding downstream 103783 15835598 ~ 15844637 (+)
ppap2d LOC104918584,LOC104945815,LOC103364129,LOC101077623 coding downstream 124328 15856143 ~ 15872350 (+)
G155212 NA non-coding upstream 116819 15544242 ~ 15544549 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding upstream 153049 15507053 ~ 15508319 (+)
G155180 metrnl non-coding upstream 211810 15446884 ~ 15449558 (+)
G155104 NA non-coding upstream 488005 15173092 ~ 15173363 (+)
G155077 NA non-coding upstream 545920 15055351 ~ 15115448 (+)
G155346 NA non-coding downstream 159280 15891095 ~ 15892034 (+)
G155342 adgrl1,LOC103392844 non-coding downstream 162059 15893874 ~ 15900522 (+)
G155384 NA non-coding downstream 426836 16158651 ~ 16201112 (+)
G155393 NA non-coding downstream 484699 16216514 ~ 16241082 (+)
G155413 NA non-coding downstream 582951 16314766 ~ 16314974 (+)
rasd2 NA other upstream 132898 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 148558 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 256763 15366920 ~ 15404605 (+)
G155088 NA other upstream 521662 15135791 ~ 15139706 (+)
LOC120575440 LOC102304323 other upstream 668860 14992013 ~ 14992508 (+)
LOC120574525 NA other downstream 155360 15887175 ~ 15891028 (+)
LOC120574544 pet100 other downstream 527869 16259684 ~ 16262058 (+)
camsap3 NA other downstream 584017 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 719418 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 789167 16520982 ~ 16563997 (+)

Expression


Co-expression Network