LOC120574823


Basic Information

Item Value
gene id LOC120574823
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15567077 ~ 15570309 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825267.1
TGCCTTCTTGCTTTGGACTTTGTTTCACCAACAACATGCAGCAGAATCGCCTTTCTCGTTGGTATTTTGGTGGAGTCTCCTCCAGTGTGGCTGCCTGTTTAACACACCCACTGGATTTAATTAAGGTGCACTTACAGACGCAGCAGGAGGTGAAGGTGAGGATGATTGGGATGGTTGTTACCGTGGTGAGGAGAGAAGGTTATCTGGCGCTCTACAGTGGCCTCAGCGCGTCCCTCTTCCGGCAGATGACATATTCTTTATCACGGTTTGCCATTTATGAAACTGTCAGGGACGAGATGAACAGGAAGAACAAAGGTTTCATGCCTTTCTACCAGAAAGTCTTGATGGGTGCCTTTGGAGCGGGAATAAGGAAACTGTTCTCTGGTGCTTCAATGGCTTCTACTAGAGGTGCACTGGTCTCTGTCGGACAGCTGTCCTGTTACGAGCAGTCCAAGCAGTTAGTTCTGGCTGCTGGTTACCTGACTGACAACATCCTCACTCACTTCCTGGCCAGTGTGTTTGCGGGAGGCTGTGCCACACTCCTGTGCCAACCACTTGATGTTGTTAAAACAAGATTAATGAACTCAAAACTGGAATATGGGGGTGTGTTTCACTGTCTAACAGAAACAGCAAGACTGGGCCCAAAGGCATTTTACAAGGGTCTTGTTCCCGCAGCTATCCGTCTCATCCCTCACACAGTCTTCACCTTCATATTCCTCGAACAACTGAGGCAGCATTTTGGTGTAGTGGTAGTCACCTGAGAGAGTTGTAAGGAAGTCTCTGCAGTTTCACTGGTTCTCTGTGTTGGACAGCTTCATTATTGATGCTATTCCTACAAAGCCATCTCAGCAGGAGTCCACTAGATACCACTAATTACAAGAACCAAGAGTAAGTCACATACCAATGTACGTCTAAAAAACCCCATTTTcctgcaaaataaaaaagttcaTCGGTAACAGAAAATTAAAGTGAGTCATGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825267.1 True 981 mRNA 0.46 8 15567077 15570309

Neighbor

gene id symbol gene type direction distance location
mrpl12 mrpl12 coding upstream 3674 15559318 ~ 15563403 (+)
hgs hgs coding upstream 10060 15545816 ~ 15557017 (+)
cldnk LOC106925874,LOC103468796,LOC106529779,LOC106946608 coding upstream 23210 15542947 ~ 15543867 (+)
btr02 LOC104960320,LOC103356290,LOC100690538,LOC106529769 coding upstream 25971 15537621 ~ 15541106 (+)
LOC120575067 NA coding upstream 29237 15535692 ~ 15537840 (+)
LOC120574430 LOC104960337 coding downstream 89762 15660071 ~ 15661057 (+)
tubb4bl tubb4a,LOC103367161,LOC100712088,LOC103372938,LOC107711200 coding downstream 96077 15666386 ~ 15669387 (+)
asf1ba LOC104960312,LOC106534676,LOC108241280,LOC102230375,LOC101069596,LOC102210765 coding downstream 104843 15675152 ~ 15681680 (+)
prkacaa prkaca,LOC104918597,LOC103367163,LOC100700452,LOC107378291,LOC101470440,LOC102230641,LOC107093417 coding downstream 112030 15682339 ~ 15703249 (+)
samd1a LOC104960309 coding downstream 135474 15705783 ~ 15717834 (+)
G155212 NA non-coding upstream 22528 15544242 ~ 15544549 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding upstream 58758 15507053 ~ 15508319 (+)
G155180 metrnl non-coding upstream 117519 15446884 ~ 15449558 (+)
G155104 NA non-coding upstream 393714 15173092 ~ 15173363 (+)
G155077 NA non-coding upstream 451629 15055351 ~ 15115448 (+)
G155257 NA non-coding downstream 91059 15661368 ~ 15731815 (+)
G155346 NA non-coding downstream 320786 15891095 ~ 15892034 (+)
G155342 adgrl1,LOC103392844 non-coding downstream 323565 15893874 ~ 15900522 (+)
G155384 NA non-coding downstream 588342 16158651 ~ 16201112 (+)
G155393 NA non-coding downstream 646205 16216514 ~ 16241082 (+)
rasd2 NA other upstream 38607 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 54267 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 162472 15366920 ~ 15404605 (+)
G155088 NA other upstream 427371 15135791 ~ 15139706 (+)
LOC120575440 LOC102304323 other upstream 574569 14992013 ~ 14992508 (+)
LOC120574525 NA other downstream 316866 15887175 ~ 15891028 (+)
LOC120574544 pet100 other downstream 689375 16259684 ~ 16262058 (+)
camsap3 NA other downstream 745523 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 880924 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 950673 16520982 ~ 16563997 (+)

Expression


Co-expression Network