LOC120574430 (LOC104960337)


Basic Information

Item Value
gene id LOC120574430
gene name LOC104960337
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15660071 ~ 15661057 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824688.1
ATGGAGAGAAATGTATCTTCACCACTGAACTTGACCTCTCTCCCAACTCAACTCCCTCTAAACAACACCGCTGACATCAACGCCACAGCAAAACCCTTCAGTGTGTTTGACAACTGCGATCATCAGGTAGAAGGCATTCTCTTTGACCTGACCCTGCAGTGCATCAACGTAGTCGTGGGAATCCCGGCCAACATACTTGTCATTGCCATCCTCATTCACAATCGCAAAGAACCCACCACCTCTGACATATTCTTGGGCTCCCTGGCCTTCATGGATGCCTACTTTAGTGCCATGACCCCTTTAATCTTCCTTAACTTGTACTACTGGCAGAGCAAACAGATGTGGTCCGCCTTCAAGTTTTCCTACGGTGTGAAAGACACGAGCGGGCCattgtttctctcctgtgtctgCCTAGATCGCTTTGTGGCTGTGCTCTTTCCAGTTATGTTTGGGGAGTTTAAACACATTAAGTACAGGTTAAGCCTCTCAGTGCTGGTATTCTGCCTCACATTTGCCTACTCTGCAGCCAAGGTTGTGGGAGGCATCCACGACTTCGAGAAGGTGTTCACCAGTGAGATCTTGGCAGCATTTACATGGATGGTCTTGAGTAATGTGTGCATCCTGTGGACCCTGAAGAAGTCCCGCGGTGCAGGGAAAGATGAGATGCACCCCATGAAGAAGAAGGCCTTCAAGACGGTGCTGTCTATCCTTTGTATCATTGTGTTCAACTACCTGCCACCTGTGGCCCTGTTTCCTTTCGAAAACCACTACTCCCCTGATGTGTTTCGCTGCTACGTGCAGCCTGTGGGCTTCGGTTTCCTCAACATCAGCAGCACCATCCAGCCACTGGTCTATCTATACCGTCTGGAGAAGGTGCCTTTCCTCTCAGACACCTGCTTTAAGAGGTGCTGCACCTGTGTCTCTGCAGAGAACAACAAACCCCCACCTGCTAATACACATGTTGAGCCTCATGGATGCTCAGTTTAA

Function

NR:

description
PREDICTED: G-protein coupled receptor 183-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824688.1 True 987 mRNA 0.50 1 15660071 15661057

Neighbor

gene id symbol gene type direction distance location
LOC120574823 NA coding upstream 89762 15567077 ~ 15570309 (+)
mrpl12 mrpl12 coding upstream 96668 15559318 ~ 15563403 (+)
hgs hgs coding upstream 103054 15545816 ~ 15557017 (+)
cldnk LOC106925874,LOC103468796,LOC106529779,LOC106946608 coding upstream 116204 15542947 ~ 15543867 (+)
btr02 LOC104960320,LOC103356290,LOC100690538,LOC106529769 coding upstream 118965 15537621 ~ 15541106 (+)
tubb4bl tubb4a,LOC103367161,LOC100712088,LOC103372938,LOC107711200 coding downstream 5329 15666386 ~ 15669387 (+)
asf1ba LOC104960312,LOC106534676,LOC108241280,LOC102230375,LOC101069596,LOC102210765 coding downstream 14095 15675152 ~ 15681680 (+)
prkacaa prkaca,LOC104918597,LOC103367163,LOC100700452,LOC107378291,LOC101470440,LOC102230641,LOC107093417 coding downstream 21282 15682339 ~ 15703249 (+)
samd1a LOC104960309 coding downstream 44726 15705783 ~ 15717834 (+)
dnajb1a LOC104918593,LOC103367166,LOC104960307 coding downstream 65242 15726299 ~ 15730345 (+)
G155212 NA non-coding upstream 115522 15544242 ~ 15544549 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding upstream 151752 15507053 ~ 15508319 (+)
G155180 metrnl non-coding upstream 210513 15446884 ~ 15449558 (+)
G155104 NA non-coding upstream 486708 15173092 ~ 15173363 (+)
G155077 NA non-coding upstream 544623 15055351 ~ 15115448 (+)
G155257 NA non-coding downstream 311 15661368 ~ 15731815 (+)
G155346 NA non-coding downstream 230038 15891095 ~ 15892034 (+)
G155342 adgrl1,LOC103392844 non-coding downstream 232817 15893874 ~ 15900522 (+)
G155384 NA non-coding downstream 497594 16158651 ~ 16201112 (+)
G155393 NA non-coding downstream 555457 16216514 ~ 16241082 (+)
rasd2 NA other upstream 131601 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 147261 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 255466 15366920 ~ 15404605 (+)
G155088 NA other upstream 520365 15135791 ~ 15139706 (+)
LOC120575440 LOC102304323 other upstream 667563 14992013 ~ 14992508 (+)
LOC120574525 NA other downstream 226118 15887175 ~ 15891028 (+)
LOC120574544 pet100 other downstream 598627 16259684 ~ 16262058 (+)
camsap3 NA other downstream 654775 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 790176 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 859925 16520982 ~ 16563997 (+)

Expression


Co-expression Network