G155384


Basic Information

Item Value
gene id G155384
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16158651 ~ 16201112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210615
gtatatatatatatatatatatatatttattattattattattatttaacatgaaaTCATTGGTAAACCGTTGTCTTCTTCAGCcaagacagtatataatattattttgtGTAATCAGAAACCTAGACACAATCTTAACTCATTCTGTATTGCTGCAGCAAGCCAGCTGTTAAGAGTCAAAATGTCTTTTCATTAATGGTATCAAATAAAGGATTCTAAATGtaacaaagaagaaaatgaaagatTCCAAAATTTGGACAAAAATATGCAGTAttatcaacttttttttctaagGTGGCCTAGTTACTCTacattattttacaataaagCATTTGATTGTATTGTTTCCTATCCATATTTGTTTTTCAACTTCATCCCTATAAGTAATTAATCgcagatactttttttaaatgtttgacaCTTCAAGTTGTTTGTTGCTTGGACCTAACAAATTGTCCTGCACGCCACTTAGTCATGATAAAATCCGAGACAGCTGAGCATTGTGCAGTGTGGGTAGCCGTGGTCTTTGGTTGTCTGCTAGCCAAGATTTGCCATATCTTGTGCCATTTTGTGTGTCAGATGCTTTTCTAACATATATTTCCAAACATTTCCCTATAACTTTGAACTGTTGTGATGTGATCGAACTGTTGTGATGTGatattagttacagttacagggACTCACCTGATGTCTGCTTCAAGTGCTTTCTGTCAATCTGCCATATTTTCTTGTAGACCAAaaatcatatttctgtatttttctgtaGATATGTATACACAATACATATCTTGGTATTTACTACgtagtgggctaaatgttcaggtCCATCTCTGAGAATGCCCTTCAGTTGTTTTCAACAAAagtaacagactgattaaaagagagaggGCTCATAGACGAGAGAAGGAgtgtgcgatggactgaagtgTACGATACAAAAACTTTCTCCGATCATGAAGCTGATTGATACTGTACAATTctctggtttatcagtgaaCTACAATGCAGACTGGATTCTCTACTCAGAGTGACAGCTAACTCATTTGAACGGGTCCAGCGCAGGTTGAATGTGTATCGGCAGATCATCTGCGTTACATACCTCTCATGTCTGAAATGTCTATAttgtcactgcgctgcattttatgAACCATGATAATCTGGtcatgggtcacatctctcgccTGCATCCAGATGCCGTCTCAGTTGCTCTTACTCATAGTAATGAAGTTAACGTTAATATCCAGTAACTACTGTTCTTCAGTGTTTTTCGCCATAGAGGCCACCACAACAGAAcattaccagcggaaacactgttACAATTCCTCTCTGTTTAACAAAATATACAGCTACAATAAAAAATTAAGGCAAAAGTCAGCAGTGTGGACCTGCGCTATTGCAGGAGAGCCTGTAAGCAAGTGGGGGCGGGGTTTCCCAGAGAGTGCGAGAGGAGAGATGCAAACACAGTAACAACTTCAAGGAAGAAATGGGTTTTGTAACGCAAAATCAAACTATATTGATATAAACCGTAATGTCTCATCCCATATCTCGTTTGAGAACCTAAAAAGTCATTATTTAattcctttttgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210615 True 1608 lncRNA 0.37 2 16158651 16201112

Neighbor

gene id symbol gene type direction distance location
lmx1al LOC104952501,LOC103364142 coding upstream 4937 16136066 ~ 16153714 (+)
LOC120574504 gmip coding upstream 22912 16119109 ~ 16135739 (+)
colgalt1a colgalt1 coding upstream 40124 16111417 ~ 16118527 (+)
pgls pgls coding upstream 47300 16104065 ~ 16111351 (+)
LOC120574519 NA coding upstream 56908 16099058 ~ 16101743 (+)
stxbp2 stxbp2 coding downstream 61604 16262716 ~ 16275058 (+)
LOC120574510 NA coding downstream 75340 16276452 ~ 16282540 (+)
xab2 xab2 coding downstream 105114 16306226 ~ 16314296 (+)
LOC120574536 LOC107711259,LOC102297959,LOC104952486,LOC100696339,LOC103358202 coding downstream 162147 16363259 ~ 16366875 (+)
LOC120574433 ppan,LOC104950896 coding downstream 428530 16629642 ~ 16636386 (+)
G155342 adgrl1,LOC103392844 non-coding upstream 258129 15893874 ~ 15900522 (+)
G155346 NA non-coding upstream 266617 15891095 ~ 15892034 (+)
G155257 NA non-coding upstream 426836 15661368 ~ 15731815 (+)
G155212 NA non-coding upstream 614102 15544242 ~ 15544549 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding upstream 650332 15507053 ~ 15508319 (+)
G155393 NA non-coding downstream 15402 16216514 ~ 16241082 (+)
G155413 NA non-coding downstream 113654 16314766 ~ 16314974 (+)
G155602 NA non-coding downstream 451821 16652933 ~ 16653513 (+)
G155616 NA non-coding downstream 517064 16718176 ~ 16722663 (+)
G155677 NA non-coding downstream 637811 16838923 ~ 16840294 (+)
LOC120574525 NA other upstream 267623 15887175 ~ 15891028 (+)
rasd2 NA other upstream 630181 15526854 ~ 15528470 (+)
arl16 arl16 other upstream 645841 15510093 ~ 15512810 (+)
ndel1b ndel1,LOC104940291 other upstream 754046 15366920 ~ 15404605 (+)
G155088 NA other upstream 1018945 15135791 ~ 15139706 (+)
LOC120574544 pet100 other downstream 58572 16259684 ~ 16262058 (+)
camsap3 NA other downstream 114720 16315832 ~ 16387522 (+)
col5a3a col5a3,LOC104952480,LOC102201017,LOC101485068,LOC102299321,LOC100695815,LOC107378343,LOC108243746 other downstream 250121 16451233 ~ 16501704 (+)
olfm2a olfm2,LOC104918560,LOC107378344,LOC100706999 other downstream 319870 16520982 ~ 16563997 (+)
cmc4 NA other downstream 532344 16733456 ~ 16734344 (+)

Expression


Co-expression Network