G155532 (LOC103358202,LOC104952486,LOC100696339)


Basic Information

Item Value
gene id G155532
gene name LOC103358202,LOC104952486,LOC100696339
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16366002 ~ 16366852 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210807
cCTTGCTCTAGTTTTCCTTAAAATTAACATAACAAACTGaatgaaaagagaaaatggTAAAATGCTTATAATTCACATGTGGTGATATTATTTGCAGTGTTTACCTGTACAAACTAATGATGAAAAGATGCtccatatttacagtacatgacAAATTAACATTATTTTAGTTACCGTACTGTAGATACAACATTCTATGGCTCGTGCCATGTTCATTGCTTCTCAGAAGGAAACTTCTGtcacattacagttggatatttTACTAAAAACCTCTGACAACAAGTTGTAGCTACCATAGTCAATCACTGTTCCCTTAGGAATAACATTTATAGTCTGTGCAATCTTTATTTCTTCCCTGTGCTCCTCTGCAGCATGCGCAGCACCCCGAGAGTAGCATTGAACACGCTGTCGTGTTTAAATATCATCTTATAGAAGGTGTCCAGAGGCAGTCGACCAGTGGGATCTGCGTGCTTCAGTGCAGTCATGGGCATGTATAGGCGGTTGGTCTGGTGGCGCAGAGGAGGCTCCTTGGCTGTGATCACTTTAACGGTTTgCTCAGCCACTTCCTCTGGTGTCTGGCCTAATGAGGAGAAGATCTTTTTAGAGTATGGTAGGTAAACTTCACGGAAGATTTTGGCGGTCTCCTCGTCCGTCCCTGAAAGATCCATCTTCTCAGCATCCTCATACACT

Function

NR:

description
PREDICTED: retinol dehydrogenase 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210807 True 690 lncRNA 0.42 2 16366002 16366852

Neighbor

gene id symbol gene type direction distance location
soul5 NA coding downstream 17093 16346378 ~ 16348909 (-)
nr5a5 LOC104952484,LOC103370553 coding downstream 21039 16341094 ~ 16344963 (-)
LOC120574499 LOC101164155,LOC101071797 coding downstream 69578 16282880 ~ 16296424 (-)
brd4 LOC104952514,LOC103370560 coding downstream 136145 16221359 ~ 16229857 (-)
lpar2a lpar2,LOC104918571,LOC103392869 coding downstream 150609 16208250 ~ 16215393 (-)
notch3 LOC103358203,LOC104952487 coding upstream 1754 16368606 ~ 16397486 (-)
rdh8a rdh8,LOC103358204,LOC102201298 coding upstream 66771 16433623 ~ 16439841 (-)
trip10a trip10,LOC104918559,LOC103358209 coding upstream 232406 16599258 ~ 16615856 (-)
icam5 NA coding upstream 249551 16616403 ~ 16621702 (-)
dnmt1 dnmt1 coding upstream 276339 16643191 ~ 16655959 (-)
G155512 NA non-coding downstream 65241 16300547 ~ 16300761 (-)
G155508 NA non-coding downstream 84434 16280383 ~ 16281568 (-)
G155507 NA non-coding downstream 85778 16279491 ~ 16280224 (-)
G155500 pet100 non-coding downstream 103972 16259819 ~ 16262030 (-)
G155493 NA non-coding downstream 142752 16204528 ~ 16223250 (-)
G155619 NA non-coding upstream 337683 16704535 ~ 16725040 (-)
G155637 LOC101467188,LOC102307478,LOC102778330 non-coding upstream 365489 16732341 ~ 16733171 (-)
G155644 NA non-coding upstream 374560 16741412 ~ 16742961 (-)
G155659 NA non-coding upstream 400581 16767433 ~ 16769938 (-)
G155693 NA non-coding upstream 467514 16834366 ~ 16836389 (-)
LOC120574432 LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284 other downstream 106977 16230459 ~ 16259025 (-)
LOC120574545 chchd5 other downstream 209935 16153787 ~ 16156067 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other downstream 550633 15813058 ~ 15815369 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other downstream 577487 15746791 ~ 15788515 (-)
LOC120574537 NA other downstream 620430 15741763 ~ 15745572 (-)
G155583 eif3g other upstream 202594 16569446 ~ 16642131 (-)
angptl6 angptl6 other upstream 254974 16621826 ~ 16626733 (-)
mgrn1b mgrn1 other upstream 645559 17012411 ~ 17023208 (-)
polr3k polr3k other upstream 666133 17032985 ~ 17035040 (-)
unkl unkl,LOC102789129 other upstream 779256 17146108 ~ 17162165 (-)

Expression


Co-expression Network