icam5


Basic Information

Item Value
gene id icam5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16616403 ~ 16621702 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826220.1
TTTCCTGTTCTGGGCGTATAATTTCCCCTGGTTTAGGCTACTTTCTTTTTATCGCCCTAAACTCATGTAACTATCAGCAACAGGTCATTACCATCAGGGCCAGTTCTGAGCCAGGATTAATCTTAACCAGGTACTGAAGCTGGGCATCAACGGGTCCATCCTGAAACACACCTCATCTCTTCCTTCCACCTCCTTCCTCCTGCATGCTCATCCAGCATGCTTCCTCTCAAGATGTTGGGCTTCCTCACGCTCATGTTTTCCCTGTGTGATGCAGACAGTTTATGCCCCACTGATCTCAACCCTCTCACCCTGGATCCCCCTGAGGTTATAAAAGAATATAAAGAGTCAGTGTTGGTAAACTGCACCAGCACAGAGGAGGATCATGACGGGATGTCCTGGACTGTTGGAAACACAGCCTCTACAACGGAACGTGACAATAGTTATATCCAAGCGCTACTCTCAAACTGGACTGTAACGGCAGAGTGCAAAATAAAGCTTAATGACACTCATGAATGCAGCAAAGACCTTAAAATCACTGTATACAAGAATCCAGAAATGGTCAGCGTTTTTTCTACAGGGCATCTACCTACAGTGGAAGGGGAAGGGACACCGTTCGAACTGCAGTGTGATATCGTCGATGTTGCTCCTATTCAAAACCTCACTGTGAGGTGGTACAAAAACAATCAAGCCATCAGGAACGACTCTTTCACCAACACGACCAAAACACCAGTAAGTGAGTCTTCTACGCTTGCAATCAACATCAGCAGAGAAGATAACGGAGCTGAGTTTAGATGTGAGGCTCAGCTGGACTTTGGGCCTCATGGATCACAACCTGTTACTTCTGACACATACACAGTTACTGTGCGCTATGCTCCTGAGCTCAAGAACAAAACGGAAGATGTCTATATGTATGGGTATAATGATATCACCCTGAACTGTGACGCTGAGGGGCAGCCTCCTCCCAACTTTCATTGGACATGTGATGGGTTAAATATCTTGGAGAACACAAATAATCTCAACATCCGTAGAGTAATCACAAACACAACCTGCAACTGCACAGCTACCAACTATCTGGGAAGCATAAATAAGCAAATCCATGTTCATGTGATACCTAGAGGTTGCCCCTTAGTAGTGACGCCTGCTGAAATGGTGGTGAGATTTGGAGATCCAGCTTCAGTTAACTGCAGCACAGATGAAGATGTTCAACAAATGGGCTGGGAGACACCAGTTGGAGCCACATCAACTCCAGGTCCTGCTGTCATCTGGAAAGTTGAAAAACTGGAAGACTGGCAGATAACCCCTTTGTGTTACATTAAGATGAAAGATAATAACAAGTGTTCTAAGAAGCTAACCATCACTCTTTATAAGACTCCAGACATTGTGTCAGTCTCTGCGTTGGGTGATGGGCCGATGGTGGAGGGCACAGAGTACCACTTGAAATGTGACATCATCAATGTGGCTCCTGTGCAGAAGCTCAAAGTGACGTGGTACCGCGACAATGAAACTGTGCACACAGAAGTGTTTAGCGGGACCAGTAAGGTCCCAGTAAATGTGTCCTCTACCTTAAGAGTGACTCCGGTGGGAGATTACAACGGAGCACATTTCATATGCAAGGCTGATCTACAGCTTGGACCAAATGGACCAGAGACCGACCCTACTGTAACCTCATCTCCTTACGTGGCTGTTGTGCACTATAAACCAGTGTTCAAAGCTTGTCCAGGCAGTTACGCTGGTTTGGAGCATGAGTTCAGTATGGACAAGTTGTCCTGTCTAGCTGATGGGAACCCTCCACCCTCCATTCTTAAGTGGAGGTTTGAGGGAAATCTGATCGATGCATCTGAGAACCTCACCAGGGCTCAATCAGGGACGTACACAGCTGAAATTGGAAATGACCTTGGCAATAGCACCACCCCTGTCGTTATCACAATCGAATATGGTGCTTCATTTACTTGTGAAGATCGCTACAAGGTTAAAGAGAATGAGAATGGTAAGCTCCCGTGTGTACCAGAGGGAATACCTAAGCCTACCATCACCTGgagtaaagatggaaaagaGATTGTTTCCCCACAGCGCTGGACAAAGCACGATAGTGGAAATTATTCACTTACTGCAACCAACAAACATGGGACAGCCAATCACGTTCTACATCTTGAAGTTTTGTACGCCCCTGTGTTCAAGAAGGGAACTAACAATATGGAGGTGAACCGGGGTGAAAATGTAACTATTGACTGCAGTGCTGAGGGCAACCCTGTCCCTGAGATCCATTTCAAATACAGCCCTGCACTGAATGTGAAAAACACCACCTGGGGGCGCCAGAAGAGAATCAGCATCACAGGAGCCACGTCAACCAATGCTGGTGTTTACAGCTGTGTTGCCATCAATGAAGTTGGGAACGGGACACTATCTGTCACGCTGACGATTAAAGGTAAAACCAGTGCAGTCTTGTCAACAGCCATTTGGTGGTTGCTAATTATATTGATCGGCACTCTCATCTTCATCATCCTGGTCATTGTCCACAACCGCTGCAAAAAACATGGACAATATAGTTTTGTCCCTGACAAAGCCAATGACGGTTCAGAACTCCCAATGACTCCTCTGTCTAACGGGGTGCAAGCTTAGGGTACATATAACTTGCTCTATGGGTAAGATTAATATGTCATTTGTTTTCTTGCATGACAAGAATGACCTGTAAAtattgtatttacatttttactttgGTATGGTACGATTCTACTACAATGAATAATAATGACAAGTCTTGTTTTCCAAGAAGTGCTACTGACAAAGCAGGTGTATTATAACATGAATTTGTCTTTGTGGGGCATTACATTCTaacctatgttttttttttaattcttaatAAAGTTACACAATAGCCta

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826220.1 True 2880 mRNA 0.45 10 16616403 16621702

Neighbor

gene id symbol gene type direction distance location
trip10a trip10,LOC104918559,LOC103358209 coding downstream 547 16599258 ~ 16615856 (-)
rdh8a rdh8,LOC103358204,LOC102201298 coding downstream 176562 16433623 ~ 16439841 (-)
notch3 LOC103358203,LOC104952487 coding downstream 218917 16368606 ~ 16397486 (-)
soul5 NA coding downstream 267494 16346378 ~ 16348909 (-)
nr5a5 LOC104952484,LOC103370553 coding downstream 271440 16341094 ~ 16344963 (-)
dnmt1 dnmt1 coding upstream 21489 16643191 ~ 16655959 (-)
s1pr2 s1pr2,LOC103392577 coding upstream 36213 16657915 ~ 16676439 (-)
elavl3 elavl3,LOC106607222,LOC102780136,LOC107754020 coding upstream 218730 16840432 ~ 16856848 (-)
angptl8 NA coding upstream 253382 16875084 ~ 16876941 (-)
LOC120575000 LOC100174873 coding upstream 299444 16921146 ~ 16922018 (-)
G155532 LOC103358202,LOC104952486,LOC100696339 non-coding downstream 249551 16366002 ~ 16366852 (-)
G155512 NA non-coding downstream 315642 16300547 ~ 16300761 (-)
G155508 NA non-coding downstream 334835 16280383 ~ 16281568 (-)
G155507 NA non-coding downstream 336179 16279491 ~ 16280224 (-)
G155500 pet100 non-coding downstream 354373 16259819 ~ 16262030 (-)
G155619 NA non-coding upstream 82833 16704535 ~ 16725040 (-)
G155637 LOC101467188,LOC102307478,LOC102778330 non-coding upstream 110639 16732341 ~ 16733171 (-)
G155644 NA non-coding upstream 119710 16741412 ~ 16742961 (-)
G155659 NA non-coding upstream 145731 16767433 ~ 16769938 (-)
G155693 NA non-coding upstream 212664 16834366 ~ 16836389 (-)
LOC120574432 LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284 other downstream 357378 16230459 ~ 16259025 (-)
LOC120574545 chchd5 other downstream 460336 16153787 ~ 16156067 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other downstream 801034 15813058 ~ 15815369 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other downstream 827888 15746791 ~ 15788515 (-)
LOC120574537 NA other downstream 870831 15741763 ~ 15745572 (-)
angptl6 angptl6 other upstream 124 16621826 ~ 16626733 (-)
mgrn1b mgrn1 other upstream 390709 17012411 ~ 17023208 (-)
polr3k polr3k other upstream 411283 17032985 ~ 17035040 (-)
unkl unkl,LOC102789129 other upstream 524406 17146108 ~ 17162165 (-)
gper1 gper1,LOC104918709,LOC100699814,LOC101483480 other upstream 543780 17165482 ~ 17173284 (-)

Expression


Co-expression Network