ndufa6 (ndufa6)


Basic Information

Item Value
gene id ndufa6
gene name ndufa6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4824252 ~ 4828932 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824372.1
CCGGAAACGCTGTAACAACAGCAATCATGGCGTCCGCAGCGACCCGAGTTGCAGCCGGTGCTGCTAAAGTTGTCAAACCAATATTTAGCCGGGACGTGGACGAAGCAAAGCGCAGGGCCCGGGAGCTGTATCGAGCCTGGTACCGAGAGGTCCCTAACACAGTGGCAACGTTTCAGCTGGACATCACAGCGCGCCAGGGAAGAGACAAAGTGAGGGAGATGTTCAACAAGAACAAGCATATCTCTGACCCCCGCGTGATCGACATGCTAGTCATTAAGGGGAAAATGGAACTCGAGGAAACGATCCATGTCTGGAAGCAGAAGACCCACGTACTGCGCTACTTTCAGGAGACTGAGGAACCTCGTGCCAATGATTTCCTGTCCAAATTCTACGGGGGTCATGACCCATGAACTGTGCAGCTGTCTGCTTCCCTCTGACCCCTCTTTGCTTGTGTCCAGTGTGACAGATGTTCCCctttactgtaaatacaaactTAACACTCACA

Function

symbol description
ndufa6 Predicted to be involved in response to oxidative stress. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 33. Orthologous to human NDUFA6 (NADH:ubiquinone oxidoreductase subunit A6).

NR:

description
NADH dehydrogenase 1 alpha subcomplex subunit 6

GO: NA

KEGG:

id description
K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824372.1 True 505 mRNA 0.52 3 4824252 4828932

Neighbor

gene id symbol gene type direction distance location
poldip3 poldip3,LOC102796373 coding downstream 20509 4795719 ~ 4803743 (-)
rrp7a rrp7a,LOC102796085 coding downstream 29403 4791444 ~ 4794849 (-)
wbp2nl wbp2nl coding downstream 42068 4776762 ~ 4782184 (-)
tcf20 tcf20 coding downstream 263808 4542290 ~ 4560444 (-)
LOC120573943 gsg1 coding downstream 284536 4528452 ~ 4539716 (-)
triobpb triobp coding upstream 2401 4831333 ~ 4855600 (-)
LOC120574312 NA coding upstream 26345 4855277 ~ 4860089 (-)
nol12 NA coding upstream 32483 4861415 ~ 4866582 (-)
srebf2 srebf2,LOC102798161 coding upstream 42665 4871597 ~ 4897912 (-)
LOC120574180 LOC103371177,LOC102309677,LOC102203270,LOC101480034 coding upstream 70694 4899626 ~ 4903295 (-)
G151799 NA non-coding downstream 240092 4583204 ~ 4584160 (-)
G151790 NA non-coding downstream 300678 4518781 ~ 4523574 (-)
G151785 NA non-coding downstream 345373 4477384 ~ 4478879 (-)
G151783 NA non-coding downstream 411092 4411516 ~ 4413160 (-)
LOC120574176 NA non-coding downstream 487028 4334272 ~ 4337224 (-)
G151924 NA non-coding upstream 40955 4869887 ~ 4893318 (-)
G151951 NA non-coding upstream 184585 5013517 ~ 5024092 (-)
G152052 NA non-coding upstream 341372 5170304 ~ 5170652 (-)
G152081 NA non-coding upstream 458926 5287858 ~ 5290361 (-)
G152104 tob2 non-coding upstream 561573 5390505 ~ 5395115 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 58759 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 359261 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 456909 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 1507337 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1908885 2911326 ~ 2915367 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 349384 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 632914 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 720359 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 745748 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 751331 5580263 ~ 5582864 (-)

Expression


Co-expression Network