LOC120574889 (bglap)


Basic Information

Item Value
gene id LOC120574889
gene name bglap
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4355685 ~ 4358977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825390.1
aagagaaagagagagagagagagagagagaagagtgacAGAGCTGTTGAAGAAAAAAGAAGCTGAAAGATGAAGACTTTGGCCGTCCTGGTTCTCTGCTCCCTGGCTGTCGTCTGTCTGACTTCAGATGCCTCCACTGGCTCCCAGCCTGCTGACAACCCTGCTCAGGAGGGTTTGTTTGTGGAGAGGGAGCAGGCCTCCGCTGTGGTGAGGCAGAAGAGAGCTGCTGGAGAGTTAACCCTGACCCAGCTGGAGAGCCTGAGAGAAGTGTGTGAGGCCAACTTGGCTTGCGAGGACATGATGGACACGCAGGGAATCATCGCCGCCTACACCGCCTACTACGGACCCATTCCCTATTAGAAGCCAAACCGCAACGACCGATTTTCTTTGCAGTTAAGCCACTCACAAAATAAGCACGAGAATACTTTTCCAAAAAAGTGTTTCAAAGTTTTgacaaacattaaaaagtgaGAGATGTGGGGTTAAAGATGGaagcagatgtgtgagaggaaTAACATGTGAATGTATTTTCCCATCCTGCATACAGACCTACACAATTCTCTCTATAATTCTATTATTGCTGTTTGCCTGTAGAGTAGTGCGATGACATTAAAATACACATAAATCAAA

Function

symbol description
bglap Predicted to enable calcium ion binding activity and hydroxyapatite binding activity. Predicted to be a structural constituent of bone. Acts upstream of or within response to mechanical stimulus. Predicted to be active in extracellular region. Is expressed in several structures, including osteoblast; renal tubule; scale; skeletal system; and trabecular layer. Human ortholog(s) of this gene implicated in osteoarthritis; osteoporosis; prostate cancer; rheumatoid arthritis; and vitamin K deficiency bleeding. Orthologous to human BGLAP (bone gamma-carboxyglutamate protein).

NR:

description
PREDICTED: osteocalcin

GO:

id name namespace
GO:0031214 biomineral tissue development biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825390.1 True 629 mRNA 0.47 4 4355685 4358977

Neighbor

gene id symbol gene type direction distance location
LOC120573904 NA coding downstream 4591 4347972 ~ 4351094 (-)
LOC120574171 wbp11 coding downstream 31044 4314794 ~ 4324641 (-)
ddx47 ddx47,LOC102790298 coding downstream 41349 4305836 ~ 4314336 (-)
LOC120574358 LOC102302242,LOC108236130,LOC103143665,LOC107376256,LOC103468406,LOC101471213,LOC105929903 coding downstream 52026 4215833 ~ 4303659 (-)
LOC120573799 aanat1b,LOC104938975,LOC106934060,LOC102233098,LOC106937025,LOC103468403,LOC105929941,LOC107104616 coding downstream 141590 4211146 ~ 4214095 (-)
LOC120574253 NA coding upstream 134607 4493584 ~ 4505527 (-)
LOC120573943 gsg1 coding upstream 169475 4528452 ~ 4539716 (-)
tcf20 tcf20 coding upstream 183313 4542290 ~ 4560444 (-)
wbp2nl wbp2nl coding upstream 417785 4776762 ~ 4782184 (-)
rrp7a rrp7a,LOC102796085 coding upstream 432467 4791444 ~ 4794849 (-)
LOC120574176 NA non-coding downstream 18461 4334272 ~ 4337224 (-)
G151691 NA non-coding downstream 87031 4268330 ~ 4268654 (-)
G151639 LOC103360002,LOC100712452,LOC105013158,LOC102214151,LOC101470166,LOC106937022,LOC103143670 non-coding downstream 190187 4130804 ~ 4165498 (-)
G151615 NA non-coding downstream 243496 4055214 ~ 4112189 (-)
G151783 NA non-coding upstream 52539 4411516 ~ 4413160 (-)
G151785 NA non-coding upstream 118407 4477384 ~ 4478879 (-)
G151790 NA non-coding upstream 159804 4518781 ~ 4523574 (-)
G151799 NA non-coding upstream 224227 4583204 ~ 4584160 (-)
G151924 NA non-coding upstream 510910 4869887 ~ 4893318 (-)
G151344 smarca4 other downstream 1038770 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1440318 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 1459342 2873918 ~ 2896343 (-)
G151146 NA other downstream 1550274 2399809 ~ 2805411 (-)
farsa farsa other downstream 2193961 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 2871 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 57200 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 226196 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 819339 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 1102869 5461846 ~ 5464418 (-)

Expression


Co-expression Network