zgc:86896 (LOC104927173,LOC107391795,LOC103363450,LOC103393532)


Basic Information

Item Value
gene id zgc:86896
gene name LOC104927173,LOC107391795,LOC103363450,LOC103393532
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 27859823 ~ 27872407 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825574.1
TTCACTCCCATGAGTAGTCACTTCCTTCACCCAGTCAGACTGCACAGCTCCATTCGTGTTGACTGCCCAGAGTCCACGAACACAGCCCTGCACCTCTAGCTACCAACAAGAATTCCACCTggccacacatacacagcaaaAGCAACACAGATCAGCCCTCACAAGCAGCTACATTCCAGCAGCCTCTCCTGCCTCTGTTGGGACATGTCGCTTTACAGTTTTGGCCTGGAGCCACTCTCCTGCCACACCTGGAACAAAGACAGGACCCAGATTGCAGTGAGTCCTAACAACAATGTGGTAAACATCTACGAAAAGAACGGCAAAGAATGGGTCAAGATCCATGAGCTGACTGAGCACAGTGGACGAATCACAGGCATTGACTGGGCCCCAGAGTCCAACCGCATTGTAACATGTGCCTCTGACCGCAATGCCTACGTGTGGACTCTGAAGGATGGCGTTTGGAAGCCCACCTTGGTCCTGGTGCGCATCAACCGGGCAGCCACCTGTGTGAAGTGGTCACCACTGGAGAACAAGTTTGCCCTGGGCAGCGGGGCTCGCCTCATCTCTGTCTGCTACTTTGAGAAGGAGAACGACTGGTGGCTGAGTAAACACATCAAGAAACCCATTTGCTCCACAGTCCTGAGTCTGGATTGGCATCCAAACAACATCCTACTGGCGGCTGGGTCTGCAGACTTCCACTGCAGGGTTTTCTCAGCCTACATCAAGGACATCGAGGACAAGCCCGGACCTACTGcctggggggccaaaatgccttTTGGGGAGGTGCTGATGGAACATAAGGACTGTGGAGGCTGGGTGCACAGTGTCTCCTTCTCCCCTGTGGGAGACCAGCTGGCCTGTGTGGCCCACAACAGCAGCATCACTGTGGTGGATGCCGCCCAGGCGAAGGAGGTCACCCAGCTGACTACCGACCATCTGCCACTTCTGAGTGTGCTCTATGTCAGCCCCACTGAGCTTGTTGCTGCGGGCCATGACTGTTGCCCGTACCAGTTCACCTATAAGGGTCCAGGTGCTCTGGAGTTTGTGAAGAAGCTGGACATCCCCAAGCAGACCTCTAAGGCCAGCATGTCAGCCATGCAACACTTCCGCAACCTGGACAAGAAGGCCACTGATGAGGAGAGCAATGAGATGGGCAACCTGCACCAGAACAGCATCACGCAGCTGTGTGTTGTATCTGGGAAGAAAGCCAAAGTGGAGAAGTACAGCAGTGTGGGTCTGGATGGAGCCATTGTGATCTGGGATTTTAAGCACTGAGACACCACAGAGTGTCAGTCTTTGAGGCGTCAGAGGCTGAAGAGACCAACGCACCCTGCCGCAGCTAAACCTACGGAACTACTGATGTGCTTTTGAGTAACTGGAAACCAATGGGAGCCCATGTGCTTTGCGAAActtgtcattaaaaaaattcaTTTGAATAAATAAAGAGGAGATTTACAGGCCAGA

Function

NR:

description
PREDICTED: actin-related protein 2/3 complex subunit 1A-like

GO: NA

KEGG:

id description
K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825574.1 True 1464 mRNA 0.53 10 27859823 27872407

Neighbor

gene id symbol gene type direction distance location
LOC120575474 NA coding upstream 85639 27761978 ~ 27774184 (+)
hao1 hao1 coding upstream 188765 27664253 ~ 27671058 (+)
sept12 LOC104934564 coding upstream 321134 27438277 ~ 27538689 (+)
jupb LOC103359554,LOC100701331,LOC102214474,LOC101475556 coding upstream 973521 26740037 ~ 26886302 (+)
LOC120574712 LOC102077703,LOC102789758,LOC102295644,LOC101478841,LOC107104997 coding upstream 1370134 26484137 ~ 26489689 (+)
wipi1 NA coding downstream 3728 27876135 ~ 27907407 (+)
slc16a6b LOC103363453 coding downstream 41333 27913740 ~ 27928660 (+)
rgs9a rgs9,LOC101473220,LOC102302237,LOC101080113 coding downstream 89615 27962022 ~ 27998962 (+)
LOC120574550 NA coding downstream 185243 28057650 ~ 28062795 (+)
smim22 NA coding downstream 200182 28072589 ~ 28079397 (+)
G158553 NA non-coding upstream 54529 27804705 ~ 27805294 (+)
G158551 NA non-coding upstream 57911 27799515 ~ 27801912 (+)
G158550 NA non-coding upstream 61498 27798034 ~ 27798325 (+)
G158549 NA non-coding upstream 62092 27797049 ~ 27797731 (+)
G158548 NA non-coding upstream 65849 27793762 ~ 27793974 (+)
G158592 NA non-coding downstream 58630 27931037 ~ 27931273 (+)
G158593 NA non-coding downstream 60605 27933012 ~ 27934506 (+)
G158594 NA non-coding downstream 62716 27935123 ~ 27982455 (+)
G158596 NA non-coding downstream 76455 27948862 ~ 28010553 (+)
G158619 NA non-coding downstream 207878 28080285 ~ 28084463 (+)
smg1 smg1 other upstream 198200 27601793 ~ 27661623 (+)
LOC120575279 NA other upstream 458855 27399876 ~ 27400968 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other upstream 1231787 26575639 ~ 26628036 (+)
G158276 NA other upstream 1390056 26455638 ~ 26469767 (+)
LOC120575027 NA other upstream 1768815 26089652 ~ 26091008 (+)
G158612 NA other downstream 176105 28048512 ~ 28052449 (+)
G158767 gps1 other downstream 654428 28526835 ~ 28532630 (+)
rras rras other downstream 867261 28739668 ~ 28767614 (+)
prrg2 NA other downstream 903666 28776073 ~ 28781350 (+)
mettl22 mettl22 other downstream 1014511 28886918 ~ 28915929 (+)

Expression


Co-expression Network