LOC120575239 (nosip)


Basic Information

Item Value
gene id LOC120575239
gene name nosip
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 28859003 ~ 28867282 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825936.1
AGGGGGCGCCATAAAACCGTCTATGCATAAaatcaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggcgaCAACAACAAGAACTTCTGTCGATGCTAGATTAACCAGGTAAAGCAGAAGTAGAATGACTCGCCATGGAAAGAACTGCACGGCCGGAGCTGTGTACACGTACCACGAGAAGAAGAAAGACACGGCGGCGTCTGGTTACGGCACACAGAGCATCCGACTGGGCAAAGACGCCATCAAAGACTTTGACTGCTGCTGCCTGTCCCTGCAGCCCTGTCGGGACCCTGTGGTGACTCCAGATGGATTCTTGTACGAAAAACAGGCCATCCTCGAATACATTTTGCACCAGAAGACAGAAACTGCCAAAAAAATGAAGGCATACGAGAAGCAGAAGCAGGTGCAGAAGAGCAGCAGCCAGCTGGAGTCCAAGTCGTCGGAGAGAGAGCGGGTGGAGCTGTTTAAAACCAGGGAGAACAGCATCGTGTCCAAACCCATCAACCCCTTCACATCTGGGCTGAACAGAGGAGGTGATCAGGGCCGAGCAGACAGCAGCTCGGCGGGAGAGTCCTCTTCGTCCTCTTCATCCTTTTCGTCCTCTGCGTCCTCAGCATCCTCGTCCTCGTCCAGCCTCAGCCTGCCCAGCTTCTGGGTCCCCTGTCTGACTCCAGAGGCCAAGCCCACCCTGCTCAAGAAACCTAGCAAGGTGGTGTTATGTCCCATGTCAGGACGAGCCATCAGGATGAACGAGCTTATCACCGTGCGCTTCACCCCGCTGGACCCCAGCCTGGACCGCGTGGCCCTGCTCACCCGCCAGGACAGGTACGTCTGTGCAGTAACCAGAGATGTCCTAGGAAACAGTGTCCCCTGCGCTGTCCTGCGGCCCTCGGGCGCCGTGGTGACGCAGGAGTGCGTGGACAGGTTGATCAAGAAGGACATGATGGATCCTGTGACTGGAGACAAGCTGTCCGACAGAGACATCATCCCCCTCCAGAGGGGGGGGACCGGCTTCGCTGCCTCAGGGATTGACCTCAGTGCCAAAGAGGCTCGTCCGGTCATGCAAGTGTGAGGCGAAGGCCCGCGGCGTGCACAGCGGCGCGTCGGGCTGGTTCCGTGGACAGCCTAGCTCGCTGACTGCTTCTCCCAGCACGTTCACAACCTTCACCTGTTTTGTCGTCCGCTGAAATGTCTTTCATGTTCCTGTAGctaattggcatttcttccATCATAGACCACACGTAATATTTAAGTGTCTATATAAGACGAGACGAGGCAGAGGACTCTACATAAGAGTAGAATCAAATGAATTGATCTGTCAATCATTAATTCTTTGAAATGTGCtgcaaaatgtattcaaattcaGAGCCATGGGATTAGTTTGATAGAATGTTCCACCCTGATGACGAGATACTGTAAATGTTTCGTAGCTTTTATATTTGATGCTCAGGGCCAGGCATTGGTTCCTATTAAACTGCATATAAGTTTAA
>XM_039825937.1
TAAAACCGTCTATGCATAAaatcaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggcgaCAACAACAAGAACTTCTGTCGATGATTAACCAGGTAAAGCAGAAGTAGAATGACTCGCCATGGAAAGAACTGCACGGCCGGAGCTGTGTACACGTACCACGAGAAGAAGAAAGACACGGCGGCGTCTGGTTACGGCACACAGAGCATCCGACTGGGCAAAGACGCCATCAAAGACTTTGACTGCTGCTGCCTGTCCCTGCAGCCCTGTCGGGACCCTGTGGTGACTCCAGATGGATTCTTGTACGAAAAACAGGCCATCCTCGAATACATTTTGCACCAGAAGACAGAAACTGCCAAAAAAATGAAGGCATACGAGAAGCAGAAGCAGGTGCAGAAGAGCAGCAGCCAGCTGGAGTCCAAGTCGTCGGAGAGAGAGCGGGTGGAGCTGTTTAAAACCAGGGAGAACAGCATCGTGTCCAAACCCATCAACCCCTTCACATCTGGGCTGAACAGAGGAGGTGATCAGGGCCGAGCAGACAGCAGCTCGGCGGGAGAGTCCTCTTCGTCCTCTTCATCCTTTTCGTCCTCTGCGTCCTCAGCATCCTCGTCCTCGTCCAGCCTCAGCCTGCCCAGCTTCTGGGTCCCCTGTCTGACTCCAGAGGCCAAGCCCACCCTGCTCAAGAAACCTAGCAAGGTGGTGTTATGTCCCATGTCAGGACGAGCCATCAGGATGAACGAGCTTATCACCGTGCGCTTCACCCCGCTGGACCCCAGCCTGGACCGCGTGGCCCTGCTCACCCGCCAGGACAGGTACGTCTGTGCAGTAACCAGAGATGTCCTAGGAAACAGTGTCCCCTGCGCTGTCCTGCGGCCCTCGGGCGCCGTGGTGACGCAGGAGTGCGTGGACAGGTTGATCAAGAAGGACATGATGGATCCTGTGACTGGAGACAAGCTGTCCGACAGAGACATCATCCCCCTCCAGAGGGGGGGGACCGGCTTCGCTGCCTCAGGGATTGACCTCAGTGCCAAAGAGGCTCGTCCGGTCATGCAAGTGTGAGGCGAAGGCCCGCGGCGTGCACAGCGGCGCGTCGGGCTGGTTCCGTGGACAGCCTAGCTCGCTGACTGCTTCTCCCAGCACGTTCACAACCTTCACCTGTTTTGTCGTCCGCTGAAATGTCTTTCATGTTCCTGTAGctaattggcatttcttccATCATAGACCACACGTAATATTTAAGTGTCTATATAAGACGAGACGAGGCAGAGGACTCTACATAAGAGTAGAATCAAATGAATTGATCTGTCAATCATTAATTCTTTGAAATGTGCtgcaaaatgtattcaaattcaGAGCCATGGGATTAGTTTGATAGAATGTTCCACCCTGATGACGAGATACTGTAAATGTTTCGTAGCTTTTATATTTGATGCTCAGGGCCAGGCATTGGTTCCTATTAAACTGCATATAAGTTTAA
>XM_039825938.1
agaagaagaagaagaagaagaagaagaagaagaagaagaaggcgaCAACAACAAGAACTTCTGTCGATGGTAATACCCTCCGAGCAGAACGGGCTAAACGCTAACGTTCTCTGAATACATTAATCTAGATTAACCAGGTAAAGCAGAAGTAGAATGACTCGCCATGGAAAGAACTGCACGGCCGGAGCTGTGTACACGTACCACGAGAAGAAGAAAGACACGGCGGCGTCTGGTTACGGCACACAGAGCATCCGACTGGGCAAAGACGCCATCAAAGACTTTGACTGCTGCTGCCTGTCCCTGCAGCCCTGTCGGGACCCTGTGGTGACTCCAGATGGATTCTTGTACGAAAAACAGGCCATCCTCGAATACATTTTGCACCAGAAGACAGAAACTGCCAAAAAAATGAAGGCATACGAGAAGCAGAAGCAGGTGCAGAAGAGCAGCAGCCAGCTGGAGTCCAAGTCGTCGGAGAGAGAGCGGGTGGAGCTGTTTAAAACCAGGGAGAACAGCATCGTGTCCAAACCCATCAACCCCTTCACATCTGGGCTGAACAGAGGAGGTGATCAGGGCCGAGCAGACAGCAGCTCGGCGGGAGAGTCCTCTTCGTCCTCTTCATCCTTTTCGTCCTCTGCGTCCTCAGCATCCTCGTCCTCGTCCAGCCTCAGCCTGCCCAGCTTCTGGGTCCCCTGTCTGACTCCAGAGGCCAAGCCCACCCTGCTCAAGAAACCTAGCAAGGTGGTGTTATGTCCCATGTCAGGACGAGCCATCAGGATGAACGAGCTTATCACCGTGCGCTTCACCCCGCTGGACCCCAGCCTGGACCGCGTGGCCCTGCTCACCCGCCAGGACAGGTACGTCTGTGCAGTAACCAGAGATGTCCTAGGAAACAGTGTCCCCTGCGCTGTCCTGCGGCCCTCGGGCGCCGTGGTGACGCAGGAGTGCGTGGACAGGTTGATCAAGAAGGACATGATGGATCCTGTGACTGGAGACAAGCTGTCCGACAGAGACATCATCCCCCTCCAGAGGGGGGGGACCGGCTTCGCTGCCTCAGGGATTGACCTCAGTGCCAAAGAGGCTCGTCCGGTCATGCAAGTGTGAGGCGAAGGCCCGCGGCGTGCACAGCGGCGCGTCGGGCTGGTTCCGTGGACAGCCTAGCTCGCTGACTGCTTCTCCCAGCACGTTCACAACCTTCACCTGTTTTGTCGTCCGCTGAAATGTCTTTCATGTTCCTGTAGctaattggcatttcttccATCATAGACCACACGTAATATTTAAGTGTCTATATAAGACGAGACGAGGCAGAGGACTCTACATAAGAGTAGAATCAAATGAATTGATCTGTCAATCATTAATTCTTTGAAATGTGCtgcaaaatgtattcaaattcaGAGCCATGGGATTAGTTTGATAGAATGTTCCACCCTGATGACGAGATACTGTAAATGTTTCGTAGCTTTTATATTTGATGCTCAGGGCCAGGCATTGGTTCCTATTAAACTGCATATAAGTTTAA
>XM_039825939.1
gaagaagaagaagaagaagaagaagaagaagaagaagaagaaggcgaCAACAACAAGAACTTCTGTCGATGGTAATACCCTCCGAGCAGAACGGGCTAAACGCTAACGTTCTCTGAATACATTAATATTAACCAGGTAAAGCAGAAGTAGAATGACTCGCCATGGAAAGAACTGCACGGCCGGAGCTGTGTACACGTACCACGAGAAGAAGAAAGACACGGCGGCGTCTGGTTACGGCACACAGAGCATCCGACTGGGCAAAGACGCCATCAAAGACTTTGACTGCTGCTGCCTGTCCCTGCAGCCCTGTCGGGACCCTGTGGTGACTCCAGATGGATTCTTGTACGAAAAACAGGCCATCCTCGAATACATTTTGCACCAGAAGACAGAAACTGCCAAAAAAATGAAGGCATACGAGAAGCAGAAGCAGGTGCAGAAGAGCAGCAGCCAGCTGGAGTCCAAGTCGTCGGAGAGAGAGCGGGTGGAGCTGTTTAAAACCAGGGAGAACAGCATCGTGTCCAAACCCATCAACCCCTTCACATCTGGGCTGAACAGAGGAGGTGATCAGGGCCGAGCAGACAGCAGCTCGGCGGGAGAGTCCTCTTCGTCCTCTTCATCCTTTTCGTCCTCTGCGTCCTCAGCATCCTCGTCCTCGTCCAGCCTCAGCCTGCCCAGCTTCTGGGTCCCCTGTCTGACTCCAGAGGCCAAGCCCACCCTGCTCAAGAAACCTAGCAAGGTGGTGTTATGTCCCATGTCAGGACGAGCCATCAGGATGAACGAGCTTATCACCGTGCGCTTCACCCCGCTGGACCCCAGCCTGGACCGCGTGGCCCTGCTCACCCGCCAGGACAGGTACGTCTGTGCAGTAACCAGAGATGTCCTAGGAAACAGTGTCCCCTGCGCTGTCCTGCGGCCCTCGGGCGCCGTGGTGACGCAGGAGTGCGTGGACAGGTTGATCAAGAAGGACATGATGGATCCTGTGACTGGAGACAAGCTGTCCGACAGAGACATCATCCCCCTCCAGAGGGGGGGGACCGGCTTCGCTGCCTCAGGGATTGACCTCAGTGCCAAAGAGGCTCGTCCGGTCATGCAAGTGTGAGGCGAAGGCCCGCGGCGTGCACAGCGGCGCGTCGGGCTGGTTCCGTGGACAGCCTAGCTCGCTGACTGCTTCTCCCAGCACGTTCACAACCTTCACCTGTTTTGTCGTCCGCTGAAATGTCTTTCATGTTCCTGTAGctaattggcatttcttccATCATAGACCACACGTAATATTTAAGTGTCTATATAAGACGAGACGAGGCAGAGGACTCTACATAAGAGTAGAATCAAATGAATTGATCTGTCAATCATTAATTCTTTGAAATGTGCtgcaaaatgtattcaaattcaGAGCCATGGGATTAGTTTGATAGAATGTTCCACCCTGATGACGAGATACTGTAAATGTTTCGTAGCTTTTATATTTGATGCTCAGGGCCAGGCATTGGTTCCTATTAAACTGCATATAAGTTTAA

Function

symbol description
nosip Predicted to enable ubiquitin protein ligase activity. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human NOSIP (nitric oxide synthase interacting protein).

NR:

description
PREDICTED: nitric oxide synthase-interacting protein isoform X2

GO: NA

KEGG:

id description
K13125 NOSIP; nitric oxide synthase-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825936.1 False 1513 mRNA 0.52 10 28859003 28867282
XM_039825937.1 False 1498 mRNA 0.52 10 28859014 28867282
XM_039825938.1 True 1519 mRNA 0.52 11 28859052 28867282
XM_039825939.1 False 1517 mRNA 0.52 11 28859050 28867282

Neighbor

gene id symbol gene type direction distance location
tspan4b LOC103363438,LOC103393501 coding upstream 20752 28824784 ~ 28838251 (+)
prr12b prr12,LOC103373617 coding upstream 36855 28781865 ~ 28822148 (+)
si:ch211-195b15.8 LOC108248462,LOC106526370,LOC105939812,LOC102226595 coding upstream 122418 28729167 ~ 28736585 (+)
ap2a1 LOC103373570,LOC104937940 coding upstream 131762 28685689 ~ 28727241 (+)
si:dkeyp-72e1.9 LOC103365753 coding upstream 540895 28213059 ~ 28318108 (+)
abat abat coding downstream 48776 28916058 ~ 28953950 (+)
rpain rpain,LOC102791362 coding downstream 87838 28955120 ~ 28958984 (+)
LOC120574945 LOC100697339,LOC101476507,LOC102792132,LOC102298486 coding downstream 108668 28975950 ~ 28985626 (+)
nags nags coding downstream 237382 29104664 ~ 29119016 (+)
LOC120574188 NA coding downstream 255928 29123210 ~ 29156378 (+)
G158818 NA non-coding upstream 84047 28774738 ~ 28774956 (+)
G158810 NA non-coding upstream 89388 28768302 ~ 28769615 (+)
G158811 NA non-coding upstream 91035 28767711 ~ 28767968 (+)
G158807 NA non-coding upstream 183712 28650686 ~ 28675291 (+)
G158806 NA non-coding upstream 203228 28649080 ~ 28655775 (+)
G158917 NA non-coding downstream 87239 28954521 ~ 28954769 (+)
G158922 NA non-coding downstream 107497 28974779 ~ 28975010 (+)
G158925 NA non-coding downstream 114127 28981409 ~ 28981864 (+)
G158923 NA non-coding downstream 120882 28988164 ~ 28988672 (+)
G158975 NA non-coding downstream 235988 29103270 ~ 29103668 (+)
prrg2 NA other upstream 77653 28776073 ~ 28781350 (+)
rras rras other upstream 91389 28739668 ~ 28767614 (+)
G158767 gps1 other upstream 326373 28526835 ~ 28532630 (+)
G158612 NA other upstream 806554 28048512 ~ 28052449 (+)
smg1 smg1 other upstream 1197380 27601793 ~ 27661623 (+)
mettl22 mettl22 other downstream 19636 28886918 ~ 28915929 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other downstream 92865 28960147 ~ 28985647 (+)
LOC120574189 LOC103364161 other downstream 333298 29200580 ~ 29207687 (+)
LOC120575282 NA other downstream 498561 29365843 ~ 29382617 (+)
G159073 hdac5 other downstream 601643 29468925 ~ 29471599 (+)

Expression


Co-expression Network