LOC120574188


Basic Information

Item Value
gene id LOC120574188
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 29123210 ~ 29156378 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824407.1
acctctGCCTATGACCATGACCTGTTGGGCCGGGAGTGGGCGTTGTTTGCGTGTGGTTAGGTAGCAGTTTCTTGTGTCTTTTTAAGAGCGGGTCAAACAGGTTTGTCAACCTCTTATGTGCCATCTGTCATAATCACCATTGCCACGGGTACAGCAGCTAAAAGTAGAGCCTGAAGAAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATATTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGGTTTTCACTCCAGAGTCATCTTCCCCCACCTAGTCCATGCACCTGTCCAGACGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGGACTACATCTGTATTATCGAGACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCTTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCAGGACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATGTAGCTGAAGGTGTGAAGGTCCAAGGTGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGGCTAAAGTGATCTACACCAGCACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATCACTGGAGAACACATCCGGCAGTACTTCATGCCTCCAGCACaggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACGTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGAGGCTGCCTGTACAGGAAGTCTCAAGGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAGTGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAAGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCGCACTCAGAGTTCTTTATTGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAACAACAAGGACAATGCTCACTACGCCCGTTTTAGAAACCCTGGAAACAGTGATGTGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTGTCAAATATGGATAGAAGACTACAATAGGAAATTGGGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGATGGCAAAACCAGGTCTGAACAGTCTCTAAGTTTCCCTATTTATGAATCTCCTTACAATGTCGCCCCCTCTGGGATAGGGAGAGACTCtttaaataccaataaaccagagaattGGTGCTTAAAGATAAATGCAGGGCCTGTATGAATGCAATTTTAAGTTAAGTTTTGAATTAGaaatctttttctctctttatcttcCAAAATGATTTAATTTTATCATTCATCTTTGTTTAaggggatacgccaccgtttgttgaaa
>XM_039824408.1
acctctGCCTATGACCATGACCTGTTGGGCCGGGAGTGGGCGTTGTTTGCGTGTGGTTAGGTAGCAGTTTCTTGTGTCTTTTTAAGAGCGGGTCAAACAGGTTTGTCAACCTCTTATGTGCCATCTGTCATAATCACCATTGCCACGGGTACAGCAGCTAAAAGTAGAGCCTGAAGAAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATATTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGGTTTTCACTCCAGAGTCATCTTCCCCCACCTAGTCCATGCACCTGTCCAGACGGCTCAGTGCTGCTCAAAGATCACATCCCCAAGGATCAGTATGAGAAGGTGGCCAAACGCCGAGCTAAGGAGCTCCAACAACACAAAGCCAGGACTACATCTGTATTATCGAGACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCTTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCAGGACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATGTAGCTGAAGGTGTGAAGGTCCAAGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATCACTGGAGAACACATCCGGCAGTACTTCATGCCTCCAGCACaggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACGTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGAGGCTGCCTGTACAGGAAGTCTCAAGGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAGTGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAAGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCGCACTCAGAGTTCTTTATTGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAACAACAAGGACAATGCTCACTACGCCCGTTTTAGAAACCCTGGAAACAGTGATGTGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTGTCAAATATGGATAGAAGACTACAATAGGAAATTGGGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGATGGCAAAACCAGGTCTGAACAGTCTCTAAGTTTCCCTATTTATGAATCTCCTTACAATGTCGCCCCCTCTGGGATAGGGAGAGACTCtttaaataccaataaaccagagaattGGTGCTTAAAGATAAATGCAGGGCCTGTATGAATGCAATTTTAAGTTAAGTTTTGAATTAGaaatctttttctctctttatcttcCAAAATGATTTAATTTTATCATTCATCTTTGTTTAaggggatacgccaccgtttgttgaaa
>XM_039824409.1
ctacctctGCCTATGACCATGACCTGTTGGGCCGGGAGTGGGCGTTGTTTGCGTGTGGTTAGGTAGCAGTTTCTTGTGTCTTTTTAAGAGCGGGTCAAACAGGTTTGTCAACCTCTTATGTGCCATCTGTCATAATCACCATTGCCACGGGTACAGCAGCTAAAAGTAGAGCCTGAAGAAAGAGAACATGAGTGCTGAGATTACCAGAACACTACAGAGggctgctgttgtgtgtgtgatcatcCTGCCGATATTATATTTGGTGATAGTCTATTACCGTCCCGGAGAGCTAAGACAAGAGGTTCCTACCACACAAAAGAGGACTACATCTGTATTATCGAGACTGCTGATTGCTTTGCCAAACTCTCCTCTGCAGTATCCTATCCAGGGTTTTACAGTACGACCTTTGACCACCACTCCCATACCAGGTTTAGCACTGCATGCAGGACAAAGAAGCAGCTACAAGGTGTCCTTGAATGTGTCCAAAGGGGTCCTGACTACGGAGAATGTAGCTGAAGGTGTGAAGGTCCAAGGTGGTGGTGGGACCAGACTGATTATGGAATCTAGCAGCCTGGTGATCCTCAACGATGCACTGGCTAAAGTGATCTACACCAGCACTGTCTACCATATACACACTGGAGACCTCGCATCCTTCCAGTTTGAAAACCATGAAGCTGTGTTTCCCATTACCATCAAACAGCCTCAGCTGCCAGTGCTGCACGACATGGGGACAGATATCAACTCTCACGTCACCATCGCCACAAAGACATTTCTGCGCTACCCACAACTCAAGGTGTTGTTGAGTAGCATCCGGCGTTTCTATAGCAACATAGAAGTCGTCATTGCAGATGACAGCTTTGAACCAGAGCACATCACTGGAGAACACATCCGGCAGTACTTCATGCCTCCAGCACaggGCTGGTTTGCTGGCAGGAATCTGGCCGTCTCCCAGGTAACCACCAAGTACTTCCTGTGGGTGGACGATGACTTTTTGTTCACGGAGAACACAAAGATAGAGAAGCTGGTGGAGGTGATGGAGGCGGTCCCAGAACTGGACGTGCTAGGTGGGACAGTACAAGGGAACcagttttatttctctcttctctatgaggaaggagaggaaatgGAAGGAGGCTGCCTGTACAGGAAGTCTCAAGGGAAGTTCCAATCACTTCCTGGTTACCCACAATGCTTTCTGGCCAGTGGGGTGGTCAACTTCTTCCTGGCTCGCACAGATGCCATCCAGAAGGTGGGATTTGACCCTAAGCTCCAAAGGGTAGCGCACTCAGAGTTCTTTATTGATGGCCTGGGCTCGTTGCTGGTCGCCACGTGTGACCATGTGTCCATTGACCATCAGCCCAAAACAGGCAACAACAAGGACAATGCTCACTACGCCCGTTTTAGAAACCCTGGAAACAGTGATGTGGAGTTCAAACTGCAGCTTCACTTTTTCAAAAACCACCTAAAGTGTGTCAAATATGGATAGAAGACTACAATAGGAAATTGGGTTACATATTTCCCTGCAGTTATTCAAATAAATAGTTCTGATTCTGGATGGCAAAACCAGGTCTGAACAGTCTCTAAGTTTCCCTATTTATGAATCTCCTTACAATGTCGCCCCCTCTGGGATAGGGAGAGACTCtttaaataccaataaaccagagaattGGTGCTTAAAGATAAATGCAGGGCCTGTATGAATGCAATTTTAAGTTAAGTTTTGAATTAGaaatctttttctctctttatcttcCAAAATGATTTAATTTTATCATTCATCTTTGTTTAaggggatacgccaccgtttgttgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824407.1 True 1956 mRNA 0.47 12 29123212 29156378
XM_039824408.1 False 1842 mRNA 0.47 11 29123212 29156378
XM_039824409.1 False 1814 mRNA 0.47 11 29123210 29156378

Neighbor

gene id symbol gene type direction distance location
nags nags coding upstream 4194 29104664 ~ 29119016 (+)
LOC120574945 LOC100697339,LOC101476507,LOC102792132,LOC102298486 coding upstream 137584 28975950 ~ 28985626 (+)
rpain rpain,LOC102791362 coding upstream 164226 28955120 ~ 28958984 (+)
abat abat coding upstream 169260 28916058 ~ 28953950 (+)
LOC120575239 nosip coding upstream 255928 28859003 ~ 28867282 (+)
LOC120574186 NA coding downstream 15617 29171995 ~ 29198622 (+)
LOC120574190 NA coding downstream 56087 29212465 ~ 29215793 (+)
col1a1a col1a1,LOC104944135 coding downstream 143034 29299412 ~ 29326460 (+)
pex12 pex12,LOC102797618 coding downstream 262590 29418968 ~ 29425336 (+)
LOC120574120 LOC103367371 coding downstream 375022 29531400 ~ 29544306 (+)
G158987 NA non-coding upstream 2222 29120778 ~ 29120988 (+)
G158975 NA non-coding upstream 19542 29103270 ~ 29103668 (+)
G158923 NA non-coding upstream 134538 28988164 ~ 28988672 (+)
G158925 NA non-coding upstream 141346 28981409 ~ 28981864 (+)
G158922 NA non-coding upstream 148200 28974779 ~ 28975010 (+)
G159060 NA non-coding downstream 234831 29391209 ~ 29391965 (+)
G159064 NA non-coding downstream 242332 29398710 ~ 29398910 (+)
G159070 NA non-coding downstream 257961 29414339 ~ 29418732 (+)
G159063 NA non-coding downstream 274864 29431242 ~ 29433842 (+)
G159071 NA non-coding downstream 292766 29449144 ~ 29454487 (+)
LOC120574944 LOC104926834,LOC101476208,LOC100703712,LOC103358663,LOC108247076,LOC106525245 other upstream 137563 28960147 ~ 28985647 (+)
mettl22 mettl22 other upstream 207281 28886918 ~ 28915929 (+)
prrg2 NA other upstream 341860 28776073 ~ 28781350 (+)
rras rras other upstream 355596 28739668 ~ 28767614 (+)
G158767 gps1 other upstream 590580 28526835 ~ 28532630 (+)
LOC120574189 LOC103364161 other downstream 44202 29200580 ~ 29207687 (+)
LOC120575282 NA other downstream 209465 29365843 ~ 29382617 (+)
G159073 hdac5 other downstream 312547 29468925 ~ 29471599 (+)
LOC120574203 NA other downstream 1076326 30232704 ~ 30246893 (+)
LOC120575288 NA other downstream 1083932 30240310 ~ 30303552 (+)

Expression


Co-expression Network